Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I1 R1 183 98.6 3427438 96.9% 3321187 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,009,574 A→G T271A (ACC→GCC)  ygeY → putative peptidase YgeY

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,009,5740AG100.0% 312.3 / NA 83T271A (ACC→GCC) ygeYputative peptidase YgeY
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (46/37);  total (46/37)

TGGGTTATGACGAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAACCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTCCCGAC  >  NC_000913/3009446‑3009707
                                                                                                                                |                                                                                                                                     
tGGGTTATGACGAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGTGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGgc                                                                                                                            >  1:703339/1‑140 (MQ=255)
tGGGTTATGACGAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGgc                                                                                                                            >  2:513407/1‑140 (MQ=255)
tGGGTTATGACGAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGgc                                                                                                                            >  2:728394/1‑140 (MQ=255)
    ttATGACGAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGgcgcgc                                                                                                                        <  1:1620840/140‑1 (MQ=255)
       tGACAAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTgg                                                                                                                     >  2:1354989/1‑140 (MQ=255)
         aCGAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGAc                                                                                                                   <  1:294724/140‑1 (MQ=255)
             aTTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGaaa                                                                                                               >  1:1340389/1‑140 (MQ=255)
                 cTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCcg                                                                                                           >  2:213221/1‑140 (MQ=255)
                   cGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCcgcg                                                                                                         >  2:1256220/1‑140 (MQ=255)
                     gCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGcc                                                                                                       <  1:1139621/140‑1 (MQ=255)
                         aGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCcctgc                                                                                                   >  1:947118/1‑140 (MQ=255)
                         aGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCcctgc                                                                                                   >  2:1680836/1‑140 (MQ=255)
                         aGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCcctgc                                                                                                   >  1:640738/1‑140 (MQ=255)
                            cACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCcctgcctg                                                                                                <  1:1517530/140‑1 (MQ=255)
                             ccccTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCctgcctgc                                                                                               <  2:847359/139‑1 (MQ=255)
                                cTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGt                                                                                            >  1:75309/1‑140 (MQ=255)
                                cTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGAGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGt                                                                                            >  2:653880/1‑140 (MQ=255)
                                   aCCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACa                                                                                         >  1:1259595/1‑140 (MQ=255)
                                   aCCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACa                                                                                         >  1:1083519/1‑140 (MQ=255)
                                         tCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAGTCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGc                                                                                   >  1:658870/1‑140 (MQ=255)
                                         tCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGc                                                                                   >  2:75060/1‑140 (MQ=255)
                                         tCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGc                                                                                   >  2:868957/1‑140 (MQ=255)
                                          cTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCt                                                                                  <  2:604089/140‑1 (MQ=255)
                                                tcttctTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAAcgcg                                                                            <  2:359322/140‑1 (MQ=255)
                                                 cttcttCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCgg                                                                           <  1:513407/140‑1 (MQ=255)
                                                  ttcttcACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGgt                                                                          <  1:700684/140‑1 (MQ=255)
                                                  ttcttcACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGgt                                                                          <  1:101693/140‑1 (MQ=255)
                                                    cttcACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGGAAGCTAACGCGgttg                                                                        <  2:1083519/140‑1 (MQ=255)
                                                    cttcACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAAc                                                                               >  1:1254686/1‑133 (MQ=255)
                                                    cttcACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAAc                                                                               <  2:1254686/133‑1 (MQ=255)
                                                         caTCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCt                                                                   <  2:563732/140‑1 (MQ=255)
                                                         caTCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCt                                                                   <  1:1256220/140‑1 (MQ=255)
                                                         caTCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCt                                                                   <  1:75060/140‑1 (MQ=255)
                                                         caTCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGAGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCt                                                                   <  1:653880/140‑1 (MQ=255)
                                                            ccccAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGttt                                                                     >  2:911532/1‑135 (MQ=255)
                                                            ccccAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGttt                                                                     <  1:911532/135‑1 (MQ=255)
                                                            ccccAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATg                                                                >  1:1338/1‑140 (MQ=255)
                                                            ccccAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATg                                                                >  2:978995/1‑140 (MQ=255)
                                                             cccAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGt                                                               <  2:57598/140‑1 (MQ=255)
                                                             cccAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGt                                                               <  2:75309/140‑1 (MQ=255)
                                                               cAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTAc                                                             >  2:1387845/1‑140 (MQ=255)
                                                               cAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTAc                                                             >  2:1081937/1‑140 (MQ=255)
                                                                      ttGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACg                                                      >  2:673894/1‑140 (MQ=255)
                                                                      ttGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACg                                                      >  1:720615/1‑140 (MQ=255)
                                                                      ttGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACg                                                      >  1:1125114/1‑140 (MQ=255)
                                                                      ttGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACg                                                      >  2:317505/1‑140 (MQ=255)
                                                                      ttGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACg                                                      >  2:856751/1‑140 (MQ=255)
                                                                      ttGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAACTAACGCGGTTGTTTCTATGTACAACTACg                                                      >  1:500048/1‑140 (MQ=255)
                                                                      tcgcgcTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACg                                                      >  2:1438094/3‑140 (MQ=255)
                                                                       tGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGa                                                     >  2:1126944/1‑140 (MQ=255)
                                                                       tGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGa                                                     >  2:164606/1‑140 (MQ=255)
                                                                           cTGTAGCAGACAGCTGTGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGAccgt                                                 <  2:703339/140‑1 (MQ=255)
                                                                           cTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGAccgt                                                 <  1:978995/140‑1 (MQ=255)
                                                                           cTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGAccgt                                                 <  1:164606/140‑1 (MQ=255)
                                                                           cTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGAccgt                                                 <  1:1680836/140‑1 (MQ=255)
                                                                           cTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGAccgt                                                 <  2:213456/140‑1 (MQ=255)
                                                                           cTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGAccgt                                                 <  2:152068/140‑1 (MQ=255)
                                                                            tGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGAccgtc                                                >  1:174106/1‑140 (MQ=255)
                                                                                   gACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTg                                         >  1:1275077/1‑140 (MQ=255)
                                                                                   gACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTg                                         >  1:1249310/1‑140 (MQ=255)
                                                                                     cAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTTCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGa                                       >  1:1159437/1‑140 (MQ=255)
                                                                                      aGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGAccgt                                                 <  2:1629613/129‑1 (MQ=255)
                                                                                      aGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGAccgt                                                 >  1:1629613/1‑129 (MQ=255)
                                                                                        cTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTg                                    >  1:232836/1‑140 (MQ=255)
                                                                                        cTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTg                                    >  2:185858/1‑140 (MQ=255)
                                                                                        cTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTg                                    >  2:954944/1‑140 (MQ=255)
                                                                                          gcgcAGTTTCAGTCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGc                                  <  2:658870/140‑1 (MQ=255)
                                                                                          gcgcAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTTCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGc                                  <  2:1159437/140‑1 (MQ=255)
                                                                                          gcgcAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGc                                  <  1:1387845/140‑1 (MQ=255)
                                                                                          gcgcAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGc                                  <  1:1081937/140‑1 (MQ=255)
                                                                                          gcgcAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGc                                  <  1:868957/140‑1 (MQ=255)
                                                                                               gTTTCAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGt                             <  1:856751/140‑1 (MQ=255)
                                                                                                   cAATCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTAc                         >  2:1584205/1‑140 (MQ=255)
                                                                                                    aaTCGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAACTCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTGcc                        <  2:1430334/140‑1 (MQ=255)
                                                                                                       cGACCGTCGTCTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCaa                     <  2:174106/140‑1 (MQ=255)
                                                                                                                tcTGACCTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCt            <  1:673894/140‑1 (MQ=255)
                                                                                                                     ccTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTc       <  1:1682387/140‑1 (MQ=255)
                                                                                                                     ccTGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTc       <  1:185858/140‑1 (MQ=255)
                                                                                                                       tGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTc       <  1:1474991/138‑1 (MQ=255)
                                                                                                                       tGGGGCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTc       >  2:1474991/1‑138 (MQ=255)
                                                                                                                        ggggCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTCCCg    >  1:132683/1‑140 (MQ=255)
                                                                                                                         gggCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTCCCGa   >  2:335875/1‑140 (MQ=255)
                                                                                                                         gggCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTCCCGa   >  2:764303/1‑140 (MQ=255)
                                                                                                                          ggCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTCCCGAc  >  2:541574/1‑140 (MQ=255)
                                                                                                                          ggCGAAGCCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTCCCGAc  >  2:1452551/1‑140 (MQ=255)
                                                                                                                                |                                                                                                                                     
TGGGTTATGACGAATTCCTCGGCAAAGGCACCCTCACCGTTTCTGAAATCTTCTTCACATCCCCAAGCCGTTGCGCTGTAGCAGACAGCTGCGCAGTTTCAATCGACCGTCGTCTGACCTGGGGCGAAACCTGGGAAGGCGCGCTGGACGAAATCCGCGCCCTGCCTGCAGTACAGAAAGCTAACGCGGTTGTTTCTATGTACAACTACGACCGTCCGTCCTGGACTGGCCTGGTTTACCCAACCGAATGCTACTTCCCGAC  >  NC_000913/3009446‑3009707

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A