Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F28 I1 R1 183 98.6 3427438 96.9% 3321187 138.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,455,326 A→G V95A (GTC→GCC)  fbp ← fructose‑1,6‑bisphosphatase 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,455,3260AG100.0% 315.2 / NA 84V95A (GTC→GCC) fbpfructose‑1,6‑bisphosphatase 1
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (41/43);  total (41/43)

CGTGCCAACAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGACAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACC  >  NC_000913/4455193‑4455462
                                                                                                                                     |                                                                                                                                        
cGTGCCAACAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAAtct                                                                                                                                    >  2:100315/1‑140 (MQ=255)
  tGCCAACAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCa                                                                                                                                  <  2:1390372/140‑1 (MQ=255)
  tGCCAACAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCa                                                                                                                                  <  1:1159501/140‑1 (MQ=255)
    ccAACAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCAtc                                                                                                                                <  1:21970/140‑1 (MQ=255)
    ccAACAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCAtc                                                                                                                                <  1:229146/140‑1 (MQ=255)
    ccAACAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTT‑ACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCAtct                                                                                                                               >  2:1157872/1‑140 (MQ=255)
     cAACAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCAtct                                                                                                                               <  1:1695621/140‑1 (MQ=255)
        cAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCAtcttct                                                                                                                            <  2:1420004/140‑1 (MQ=255)
        cAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCAtcttct                                                                                                                            >  1:521567/1‑140 (MQ=255)
              tAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCa                                                                                                                      <  2:82443/140‑1 (MQ=255)
              tAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCa                                                                                                                      <  2:231064/140‑1 (MQ=255)
              tAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCa                                                                                                                      <  2:326022/140‑1 (MQ=255)
                   cggcggTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAACACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGc                                                                                                                 >  2:1331252/1‑140 (MQ=255)
                     gcggTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCaa                                                                                                               >  1:1689519/1‑140 (MQ=255)
                      cggTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCa                                                                                                                      >  2:1421271/1‑132 (MQ=255)
                      cggTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCa                                                                                                                      <  1:1421271/132‑1 (MQ=255)
                      cggTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAAt                                                                                                              >  2:1316983/1‑140 (MQ=255)
                      cggTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAAt                                                                                                              >  1:1565724/1‑140 (MQ=255)
                      cggTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAAt                                                                                                              <  2:521567/140‑1 (MQ=255)
                       ggTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATg                                                                                                             <  1:1316983/140‑1 (MQ=255)
                         tAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGcc                                                                                                           <  1:1002285/140‑1 (MQ=255)
                         tAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGcc                                                                                                           <  2:556477/140‑1 (MQ=255)
                           gATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCg                                                                                                         >  1:1408215/1‑140 (MQ=255)
                           gATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTCGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCg                                                                                                         <  2:1599013/140‑1 (MQ=255)
                                agaAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGcc                                                                                                           >  2:1158057/1‑133 (MQ=255)
                                agaAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGcc                                                                                                           <  1:1158057/133‑1 (MQ=255)
                                agaAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACg                                                                                                    <  1:669039/140‑1 (MQ=255)
                                agaAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACg                                                                                                    >  1:77169/1‑140 (MQ=255)
                                    aaTGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGatat                                                                                                <  2:1517493/140‑1 (MQ=255)
                                         tACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGt                                                                                           <  2:888819/140‑1 (MQ=255)
                                           ccGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGc                                                                                         >  1:799188/1‑140 (MQ=255)
                                                  agaCGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGt                                                                                  >  1:316087/1‑140 (MQ=255)
                                                   gaCGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTg                                                                                 >  1:1311452/1‑140 (MQ=255)
                                                   gaCGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTg                                                                                 <  2:704548/140‑1 (MQ=255)
                                                        tAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCt                                                                            <  2:914046/140‑1 (MQ=255)
                                                         aaCATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCtt                                                                           <  2:799188/140‑1 (MQ=255)
                                                          aCATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCttt                                                                          <  1:378608/140‑1 (MQ=255)
                                                          aCATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCttt                                                                          <  2:1631530/140‑1 (MQ=255)
                                                          aCATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCttt                                                                          <  1:1157872/140‑1 (MQ=255)
                                                          aCATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGACttt                                                                          <  2:1306940/140‑1 (MQ=255)
                                                            aTCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCa                                                                        >  2:1669869/1‑140 (MQ=255)
                                                                aTGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGttt                                                                    >  2:332001/1‑140 (MQ=255)
                                                                    tGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCa                                                                >  1:1326497/1‑140 (MQ=255)
                                                                          aGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCg                                                          <  2:1233999/140‑1 (MQ=255)
                                                                           gCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGa                                                         >  1:938029/1‑140 (MQ=255)
                                                                           gCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGa                                                         >  1:926372/1‑140 (MQ=255)
                                                                            ccATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGaa                                                        <  1:100315/140‑1 (MQ=255)
                                                                                ccAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAg                                                    >  2:18091/1‑140 (MQ=255)
                                                                                 cAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGt                                                   <  2:316087/140‑1 (MQ=255)
                                                                                     gggTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGA‑GGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGt                                              <  1:668750/140‑1 (MQ=255)
                                                                                      ggTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGt                                              >  1:471503/1‑140 (MQ=255)
                                                                                      ggTCCATCAGCACCACGTATTTTGCGTGTTCACAG‑CTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGtt                                             >  1:1198621/1‑140 (MQ=255)
                                                                                       gTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAAc                                                       >  2:1507461/1‑130 (MQ=255)
                                                                                       gTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAAc                                                       <  1:1507461/130‑1 (MQ=255)
                                                                                       gTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGtt                                             >  1:980250/1‑140 (MQ=255)
                                                                                        tCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGttt                                            >  2:416152/1‑140 (MQ=255)
                                                                                         ccATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTc                                           >  1:916851/1‑140 (MQ=255)
                                                                                         ccATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTc                                           >  1:547818/1‑140 (MQ=255)
                                                                                               gCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGa                                     >  1:151330/1‑140 (MQ=255)
                                                                                                caccacGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGaa                                    >  1:635904/1‑140 (MQ=255)
                                                                                                  ccacGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAAcc                                  <  2:77169/140‑1 (MQ=255)
                                                                                                  ccacGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAAcc                                  >  1:1472259/1‑140 (MQ=255)
                                                                                                   cacGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCt                                 <  1:1082335/140‑1 (MQ=255)
                                                                                                   cacGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCt                                 >  2:1082335/1‑140 (MQ=255)
                                                                                                     cGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTctg                                         <  1:272669/130‑1 (MQ=255)
                                                                                                     cGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTctg                                         >  2:272669/1‑130 (MQ=255)
                                                                                                     cGTATTTTGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCg                               >  1:1568664/1‑140 (MQ=255)
                                                                                                          tttGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTg                          >  2:1461964/1‑140 (MQ=255)
                                                                                                           ttGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGc                         <  2:433719/140‑1 (MQ=255)
                                                                                                           ttGCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGc                         <  2:916851/140‑1 (MQ=255)
                                                                                                             gCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCAc                       >  2:267225/1‑140 (MQ=255)
                                                                                                             gCGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCAc                       <  2:926372/140‑1 (MQ=255)
                                                                                                              cGTGTTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACg                      >  2:1155634/1‑140 (MQ=255)
                                                                                                               gtgtTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGt                     >  1:200968/1‑140 (MQ=255)
                                                                                                                 gtTCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTtc                   >  1:671084/1‑140 (MQ=255)
                                                                                                                  ttCACAGCCTTCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTtct                  <  1:469313/140‑1 (MQ=255)
                                                                                                                        gCCTTCAAAGACCGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCAc            >  2:273493/1‑140 (MQ=255)
                                                                                                                            tCAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCt        >  1:767970/1‑140 (MQ=255)
                                                                                                                             cAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTTGCCCTGCACGTTCTCAGCACCGCTg       <  1:1296876/140‑1 (MQ=255)
                                                                                                                             cAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTg       <  2:656904/140‑1 (MQ=255)
                                                                                                                             cAAAGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTg       <  2:980250/140‑1 (MQ=255)
                                                                                                                              aaaGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTgg      <  2:561368/140‑1 (MQ=255)
                                                                                                                               aaGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGc     >  1:652626/1‑140 (MQ=255)
                                                                                                                                aGACGGCAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCa    <  2:938029/140‑1 (MQ=255)
                                                                                                                                  acggcAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCAcc  <  2:635904/140‑1 (MQ=255)
                                                                                                                                     |                                                                                                                                        
CGTGCCAACAGGCGTAACGCGGCGGTAGATGGAGAAAATGGTACCGACAGAGACGTTAACATCGATGTTGGACGAGCCATCCAGGGGGTCCATCAGCACCACGTATTTTGCGTGTTCACAGCCTTCAAAGACGACAATCTCATCTTCTTCTTCAGAGGCAATGCCCGCAACGATATCGCGTGCTTTCAGTGCGGCTTTCAGTTTTTCATTAGCGAACAAGTCGAGTTTCTGCTGAACCTCGCCCTGCACGTTCTCAGCACCGCTGGCACC  >  NC_000913/4455193‑4455462

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A