Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F28 I1 R1
|
258 |
142.3 |
4824480 |
99.1% |
4781059 |
138.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,786,943 |
T→C |
N57S (AAC→AGC) |
ppsA ← |
phosphoenolpyruvate synthetase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,786,943 | 0 | T | C | 100.0%
| 390.7
/ NA
| 107 | N57S (AAC→AGC) | ppsA | phosphoenolpyruvate synthetase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (55/52); total (55/52) |
Only 100 of 108 total aligned reads displayed.
CAGGCTGGAAGGGAGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGTTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAGTTGGTTATAC > NC_000913/1786806‑1787077
|
cAGGCTGGAAGGGAGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTa > 2:2038082/1‑140 (MQ=255)
aGGCTGGAAGGGAGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTaa > 1:702934/1‑140 (MQ=255)
ggCTGGAAGGGAGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTaaa < 2:1732817/140‑1 (MQ=255)
gCTGGAAGGGAGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAAc > 2:1554369/1‑140 (MQ=255)
ggAGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTcggc > 2:1737148/1‑140 (MQ=255)
aGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTcggcgg > 1:1871314/1‑140 (MQ=255)
aGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTcggcgg > 2:335984/1‑140 (MQ=255)
aGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTcggcgg > 2:1350805/1‑140 (MQ=255)
gtgtCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGt > 1:864288/1‑140 (MQ=255)
tgtCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGtt < 2:1871314/140‑1 (MQ=255)
tCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTtgt > 2:222546/1‑140 (MQ=255)
cGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTtgtg > 1:498937/1‑140 (MQ=255)
tCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGaaa < 1:2038082/140‑1 (MQ=255)
aCTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCa > 1:844382/1‑140 (MQ=255)
aCTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGGTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGGTGAGGTGTAACCa > 2:2193642/1‑140 (MQ=255)
tGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGGAACCaat > 2:1227072/1‑138 (MQ=255)
gCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTcg > 2:231408/1‑140 (MQ=255)
gCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTcg > 1:92946/1‑140 (MQ=255)
gATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTcggaa < 2:814703/140‑1 (MQ=255)
gATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTcggaa > 1:1358682/1‑140 (MQ=255)
tGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTcggaacgga > 1:279422/1‑140 (MQ=255)
gcgcCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGaaaa > 1:528380/1‑139 (MQ=255)
cGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCa < 2:1004861/140‑1 (MQ=255)
gCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGa < 1:1390367/140‑1 (MQ=255)
gCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGa < 2:1204483/140‑1 (MQ=255)
cTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGAt > 2:260156/1‑140 (MQ=255)
tGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGAtt > 2:2140416/1‑140 (MQ=255)
tGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGAtt > 1:206178/1‑140 (MQ=255)
aGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAg > 1:201458/1‑140 (MQ=255)
cATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATc > 1:573465/1‑140 (MQ=255)
tCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCAt > 2:2173280/1‑140 (MQ=255)
tCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCAt > 2:236966/1‑140 (MQ=255)
tCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCAt < 2:573465/140‑1 (MQ=255)
tCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCAt > 2:696069/1‑140 (MQ=255)
cGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCAtt < 2:92946/140‑1 (MQ=255)
tCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTc > 2:89438/1‑140 (MQ=255)
tCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTc > 1:1961733/1‑140 (MQ=255)
tCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTc > 2:1541057/1‑140 (MQ=255)
tCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTc > 1:1141354/1‑140 (MQ=255)
tCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTc > 1:2269927/1‑140 (MQ=255)
tCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTc > 1:1112837/1‑140 (MQ=255)
tttATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAgg < 1:1737148/140‑1 (MQ=255)
aTCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCAt > 1:1666450/1‑140 (MQ=255)
tCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCAtt > 1:1301850/1‑140 (MQ=255)
agcagTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCAttttt > 2:85286/1‑140 (MQ=255)
cagTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGc > 2:680871/1‑140 (MQ=255)
cagTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGc > 2:185610/1‑140 (MQ=255)
agTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGcc < 1:231408/140‑1 (MQ=255)
gTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGccc < 1:649587/140‑1 (MQ=255)
gTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGccc < 1:2140416/140‑1 (MQ=255)
gTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGccc < 1:1176680/140‑1 (MQ=255)
ttCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGcccc > 2:820033/1‑140 (MQ=255)
ttCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGcccc > 2:644668/1‑140 (MQ=255)
ttCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGcccc < 1:222546/140‑1 (MQ=255)
ttCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGcccc < 2:1112837/140‑1 (MQ=255)
ttCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGcccc < 1:1541057/140‑1 (MQ=255)
ttCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGcccc > 2:752759/1‑140 (MQ=255)
ttCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGcccc > 1:358455/1‑140 (MQ=255)
ttCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCCGAAAAATTAGTAATCATTTCACCCAGGGAGGCATTTTTTcccc > 2:602707/1‑140 (MQ=255)
cATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCa < 2:115651/140‑1 (MQ=255)
cATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCa < 1:260156/140‑1 (MQ=255)
aaaTGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc < 1:1350805/140‑1 (MQ=255)
aaaTGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc < 2:1301850/140‑1 (MQ=255)
aaaTGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc < 1:2193642/140‑1 (MQ=255)
aaaTGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc < 1:89438/140‑1 (MQ=255)
aaaTGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc < 1:680871/140‑1 (MQ=255)
aaaTGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc < 2:702934/140‑1 (MQ=255)
aTGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAAACATTCGGAACGGAAACACCCATTCCGGAAAGATTTGTTATCCTTTCACCCAGGGAGGCATTTTTGCCCCCAAcccc > 2:45545/1‑139 (MQ=255)
gcgcTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGt < 2:456980/140‑1 (MQ=255)
cgcTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc > 2:1624921/1‑135 (MQ=255)
cgcTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc < 1:1624921/135‑1 (MQ=255)
cgcTGGTTTACGCCGCTTTGGTCCAGAAACTGACTAAACGCGTCGGCGGTTGTGGCGAAACCATTGGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTc > 2:2116257/1‑140 (MQ=255)
cTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc > 1:1238278/1‑133 (MQ=255)
cTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc < 1:1272406/133‑1 (MQ=255)
cTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc < 2:1238278/133‑1 (MQ=255)
cTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc > 2:1272406/1‑133 (MQ=255)
cTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTa > 1:129061/1‑140 (MQ=255)
cTGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTa > 2:663958/1‑140 (MQ=255)
tGGTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTAc < 1:663958/140‑1 (MQ=255)
gTTTACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTAcat > 1:868739/1‑140 (MQ=255)
tACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTAcatcat > 1:1041236/1‑140 (MQ=255)
tACGCCGCTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTAcatcat < 1:2069147/140‑1 (MQ=255)
cgccgcTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAAcc > 1:627442/1‑125 (MQ=255)
cgcTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATg < 2:34673/140‑1 (MQ=255)
cgcTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATg < 2:498937/140‑1 (MQ=255)
cgcTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATg < 1:820033/140‑1 (MQ=255)
cTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGt > 2:857345/1‑124 (MQ=255)
cTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGt < 1:857345/124‑1 (MQ=255)
cTTTGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGcc > 1:1339361/1‑140 (MQ=255)
tGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAg < 2:279422/140‑1 (MQ=255)
tGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAg < 1:663219/140‑1 (MQ=255)
tGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAg < 2:1041236/140‑1 (MQ=255)
tGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAg < 1:185610/140‑1 (MQ=255)
tGGTCCAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAg < 2:206178/140‑1 (MQ=255)
cAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAGTTGGt < 2:1961733/140‑1 (MQ=255)
cAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAGTTGGt < 2:528380/140‑1 (MQ=255)
cAGAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAGTTGGt < 1:45545/140‑1 (MQ=255)
gAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCACTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCGACCCTGTCTACATCATTCATGCCGAGTTGGTta > 2:1829229/1‑140 (MQ=255)
gAAACTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACAGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAGTTGGTta < 1:241141/140‑1 (MQ=255)
aCTGGCTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAGTTGGTTATAc < 1:752759/140‑1 (MQ=255)
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CAGGCTGGAAGGGAGTGTCGATAATCCACTGGCGGATTTGCGCGCCCGCTTTCGCAAGCTGAGTAACATCGTCAATATCCGTTTTATCCAGCAGTTCATAAATGCGCTGGTTTACGCCGCTTTGGTCCAGAAACTGGTTAAACGCGTCGGCGGTTGTGGCGAAACCATTCGGAACGGAAACACCCATTCCGGAAAGATTAGTAATCATTTCACCCAGGGAGGCATTTTTGCCCCCAACCCTGTCTACATCATTCATGCCGAGTTGGTTATAC > NC_000913/1786806‑1787077
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
