Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A8 F28 I1 R1	258	142.3	4824480	99.1%	4781059	138.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,386,665	A→G	H269R (CAC→CGC)	yfbL →	putative peptidase YfbL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,386,665	0	A	G	100.0%	217.5 / NA	60	H269R (CAC→CGC)	yfbL	putative peptidase YfbL
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (50/10); total (50/10)

TTTATTGCCGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATG  >  NC_000913/2386529‑2386799

tttATTGCCGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCt                                                                                                                                     <  1:1968406/140‑1 (MQ=255)

        cGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAattatt                                                                                                                             >  1:23200/1‑140 (MQ=255)

        cGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAattatt                                                                                                                             <  2:419229/140‑1 (MQ=255)

        cGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAattatt                                                                                                                             <  1:1904325/140‑1 (MQ=255)

        cGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAattatt                                                                                                                             <  2:635198/140‑1 (MQ=255)

          tGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTgg                                                                                                                           <  2:141392/140‑1 (MQ=255)

          tGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTgg                                                                                                                           >  2:1869269/1‑140 (MQ=255)

            gTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCa                                                                                                                         <  2:898632/140‑1 (MQ=255)

            gTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCCG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCa                                                                                                                         <  2:2133645/140‑1 (MQ=255)

             tCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCaa                                                                                                                        <  2:1562940/140‑1 (MQ=255)

                        aagaatatCACCGCCGTTCGTCAGGAAAAGGCGGTTTTTTTGTCATCTAAGTTTTTTTTTTTTTTTTCTATAAAT‑CCCCAGGGTTTTATTCCGGT‑TTTTGTTTTCTCTGCCCGCGTGAATTATTGGCAACACGATATTcc                                                                                                             <  2:1128313/136‑1 (MQ=255)

                           gATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGc                                                                                                          >  1:234885/1‑140 (MQ=255)

                              atCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCAt                                                                                                       >  1:353174/1‑140 (MQ=255)

                              atCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATT‑CCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATa                                                                                                      >  1:1940102/1‑140 (MQ=255)

                                cAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACg                                                                                                                    >  2:1216091/1‑125 (MQ=255)

                                cAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACg                                                                                                                    <  1:1216091/125‑1 (MQ=255)

                                cAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATaa                                                                                                     >  1:2245035/1‑140 (MQ=255)

                                   cGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGa                                                                                                  >  2:1402191/1‑140 (MQ=255)

                                       gTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTAc                                                                                              >  2:150561/1‑140 (MQ=255)

                                       gTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTAc                                                                                              >  1:1164318/1‑140 (MQ=255)

                                        ttCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGAttctg                                                                                             >  1:1223700/1‑137 (MQ=255)

                                        ttCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACt                                                                                             >  1:2347578/1‑140 (MQ=255)

                                         tCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTg                                                                                            >  1:773755/1‑140 (MQ=255)

                                                      gCGGCTTTTTTTTCTTCTCAGTTTTTTTTTTTTTTTTTTATAAACCCCCCGGGT‑TTTTTTCCGGT‑TTTTTTTTTCTCTGCCCGCTTAATTTATTGGAAACACAATATCCCCGCCATAATGATTACTGACACCGCTTTTTa                                                                               <  2:283375/140‑1 (MQ=255)

                                                              tttttCATCTCAGTTTTTTTTTTTTTTTTCTAAAAAT‑CCCCCGGG‑TTTTTTCCCGGTTTTTTTTTTCTCTCCCCGCTTAATTTTTTGGCAACACGATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGtaata                                                                       <  2:2347578/136‑1 (MQ=255)

                                                                         aGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATAcctg                                                            >  1:1166717/1‑138 (MQ=255)

                                                                         aGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCAc                                                            >  1:1466505/1‑140 (MQ=255)

                                                                              ttttttttttATTCTATAAACCCCCCGGGT‑TTTTTTCCCTT‑TTTTTTTTTCTCTGCCCGCTTAATTTATTGCCAACACAATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGcc                                                       <  2:1466505/133‑1 (MQ=255)

                                                                                aTCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCg                                                     >  1:257283/1‑140 (MQ=255)

                                                                                aTCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCg                                                     >  1:957329/1‑140 (MQ=255)

                                                                                aTCTGTTTATTCTATGAATACCCAAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACtctgtct                                                     >  1:570277/1‑134 (MQ=255)

                                                                                aTCTGTTTATCCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCg                                                     >  1:376457/1‑140 (MQ=255)

                                                                                 tCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCgg                                                    >  1:102661/1‑140 (MQ=255)

                                                                                   ttttttttttATAAATCCCCCGGGT‑TTTTTTCCGGT‑TTTTTTTTTCTCTGCCCGCTTAATTTATGGGAAACACGATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTg                                                  <  2:102661/138‑1 (MQ=255)

                                                                                     tttATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGAt                                                >  1:1180199/1‑140 (MQ=255)

                                                                                         ttCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCg                                            >  1:1546826/1‑140 (MQ=255)

                                                                                             ataaaTCCCCCGGGT‑TTTTTTCCGGT‑TTTTTTTTTCTCCGCCCGCTTAAATTTTTGACAACACAATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGcaga                                        <  2:52354/137‑1 (MQ=255)

                                                                                               gAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGcagaca                                      >  1:195052/1‑140 (MQ=255)

                                                                                               gAATACCCCAGGG‑TTTATCCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGcagaca                                      >  1:722671/1‑140 (MQ=255)

                                                                                                   cccccAGGG‑TTTTTTTCCGGTTATTTTTTTCTCTGCCCGCATAAATTATTGGAAACACAATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGAt                                   <  2:195052/139‑1 (MQ=255)

                                                                                                   aCCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGAtt                                  >  1:364313/1‑140 (MQ=255)

                                                                                                   aCCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGAtt                                  >  1:741055/1‑140 (MQ=255)

                                                                                                   aCCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGAtt                                  >  1:1988235/1‑140 (MQ=255)

                                                                                                    ccccAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTg                                 >  1:1659506/1‑140 (MQ=255)

                                                                                                      ccAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGaa                               >  1:1568147/1‑140 (MQ=255)

                                                                                                        aGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAAtt                             >  1:1318595/1‑140 (MQ=255)

                                                                                                        aGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAAtt                             >  1:1256778/1‑140 (MQ=255)

                                                                                                          gg‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTAt                           >  2:1023568/1‑140 (MQ=255)

                                                                                                          gg‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTAt                           >  1:2338390/1‑140 (MQ=255)

                                                                                                          gg‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTAt                           >  1:1436992/1‑140 (MQ=255)

                                                                                                          gg‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTAt                           >  1:1006716/1‑140 (MQ=255)

                                                                                                          gg‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTAt                           >  1:1226836/1‑140 (MQ=255)

                                                                                                          gg‑TTTATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTAt                           >  1:360633/1‑140 (MQ=255)

                                                                                                               tATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGAt                                   >  2:930525/1‑128 (MQ=255)

                                                                                                               tATTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGAt                                   <  1:930525/128‑1 (MQ=255)

                                                                                                                aTTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGaa                      >  2:1785705/1‑140 (MQ=255)

                                                                                                                aTTCCCGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGaa                      >  2:1905462/1‑140 (MQ=255)

                                                                                                                 ttCCGGG‑TTTTGTTTTCTCTGCCCGCTTAAATTATGGCAAACACGATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGaaa                     <  1:1402191/140‑1 (MQ=255)

                                                                                                                     cGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATgg                 >  2:520478/1‑140 (MQ=255)

                                                                                                                     cGG‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATgg                 >  1:2357630/1‑140 (MQ=255)

                                                                                                                      gg‑TATTGATTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGc                >  1:703555/1‑140 (MQ=255)

                                                                                                                        ttttttttttCTCTCCCCGCCTAATTTATTGGAAACACAATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCt               <  2:376457/133‑1 (MQ=255)

                                                                                                                        ttttttttttCTCTCCCCGCCTAATTTATGGAAAACACAATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCt               <  1:150561/133‑1 (MQ=255)

                                                                                                                        ttttttttttCTCGGCCCGCCTAATTTATTGGCACCACAATTTCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCt               <  2:257283/133‑1 (MQ=255)

                                                                                                                         tttttttttCTCTGCCCGCCTAAATTATTGCCAACACGTTATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTc              <  2:1413777/134‑1 (MQ=255)

                                                                                                                         tatttttttCTCTGCCCGCTTAATTTTTTGGAAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTc              <  1:1417028/134‑1 (MQ=255)

                                                                                                                              aTTTCTCTGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTa         >  2:74374/1‑140 (MQ=255)

                                                                                                                                   tctGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTggc    >  1:2178402/1‑139 (MQ=255)

                                                                                                                                   tctGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGa    >  2:1013845/1‑140 (MQ=255)

                                                                                                                                   tctGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGa    >  2:1051955/1‑140 (MQ=255)

                                                                                                                                   tctGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGa    >  1:208859/1‑140 (MQ=255)

                                                                                                                                    ctGCCCGCCTAAATTTTTGGCAACACGTTATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGAt   <  2:234885/140‑1 (MQ=255)

                                                                                                                                    ctGCCCGCCTAAATTATTGCCAACACAATATCCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGAt   <  2:364313/140‑1 (MQ=255)

                                                                                                                                     tGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATg  >  2:1271941/1‑140 (MQ=255)

                                                                                                                                     tGACCGCCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATg  >  2:1279568/1‑140 (MQ=255)

TTTATTGCCGTGGTCGGCAGAATACAGGATATCAACGCCGTTCGTCAGGTAAAAGCGGCATTGTTGTCATCTCAGGATTTATCTGTTTATTCTATGAATACCCCAGGG‑TTTATTCCCGG‑TATTGATTTCTCTGACCACCTGAATTATTGGCAACACGATATTCCCGCCATAATGATTACTGACACCGCTTTTTATCGTAATAAACAATACCACTTGCCCGGTGATACCGCAGACAGATTGAATTATCAGAAAATGGCTCAGGTAGTGGATG  >  NC_000913/2386529‑2386799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A