Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I1 R1 260 73.5 2514320 99.3% 2496719 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 42,683 +A coding (281/771 nt) fixA → putative electron transfer flavoprotein FixA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091342,6821.A100.0% 194.9 / NA 55Q94K (CAG→AAG) fixAputative electron transfer flavoprotein FixA
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base A (24/31);  total (24/31)

AAGCAACAGGCAGCAGAGGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑C‑AGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTCTGCTGGTGGGCGAAATC  >  NC_000913/42547‑42813
                                                                                                                                         |                                                                                                                                   
aaGCAACAGGCAGCAGAGGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑C‑aagg                                                                                                                                 <  1:836352/140‑4 (MQ=255)
  gCAACAGGCAGCAGAGGCGCAGGTGACAGCCTTAAGTTTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑C‑aaggca                                                                                                                               >  1:801050/1‑135 (MQ=255)
  gCAACAGGCAGCAGAGGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑C‑aaggca                                                                                                                               <  1:1139993/140‑6 (MQ=255)
  gCAACAGGCAGCAGAGGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑C‑aaggca                                                                                                                               <  1:1234265/140‑6 (MQ=255)
        ggCAGCAGAGGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCg                                                                                                                          >  2:269229/1‑140 (MQ=255)
            gcagAGGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAACGCACTGCCGcaac                                                                                                                      >  2:946300/1‑140 (MQ=255)
              agagGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGcaacaa                                                                                                                    <  1:1157615/140‑1 (MQ=255)
                agGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAAc                                                                                                                  <  1:1160686/140‑1 (MQ=255)
                    gcAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCAGATGAACTGATTGTGGTGAATGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCg                                                                                                              <  1:946300/140‑1 (MQ=255)
                          gACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCa                                                                                                        >  1:1001628/1‑140 (MQ=255)
                          gACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCa                                                                                                        <  1:269229/140‑1 (MQ=255)
                              gCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTgg                                                                                                    >  2:559989/1‑140 (MQ=255)
                                       gtgGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAgccg                                                                                           >  1:843386/1‑140 (MQ=255)
                                         gggCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAgccgcc                                                                                         >  1:1188884/1‑140 (MQ=255)
                                         gggCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAgccgcc                                                                                         >  1:715504/1‑140 (MQ=255)
                                         gggCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATAACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAgccgcc                                                                                         >  2:508581/1‑140 (MQ=255)
                                          ggCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGccc                                                                                        <  2:843386/140‑1 (MQ=255)
                                                 aaGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGc                                                                                 <  1:751705/140‑1 (MQ=255)
                                                      cTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCt                                                                            <  2:504142/140‑1 (MQ=255)
                                                      cTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCt                                                                            <  2:1188884/140‑1 (MQ=255)
                                                       tGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCtt                                                                           <  1:28805/140‑1 (MQ=255)
                                                       tGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCtt                                                                           <  2:933733/140‑1 (MQ=255)
                                                         aCCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTtg                                                                         >  2:741448/1‑140 (MQ=255)
                                                              cGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTtgatctg                                                                    >  1:538536/1‑140 (MQ=255)
                                                              cGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTtgatctg                                                                    >  2:189358/1‑140 (MQ=255)
                                                              cGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTtgatctg                                                                    >  1:762631/1‑140 (MQ=255)
                                                              cGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTtgatctg                                                                    <  2:801050/140‑1 (MQ=255)
                                                              cGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTtgatctg                                                                    >  2:376424/1‑140 (MQ=255)
                                                              cGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTtgatctg                                                                    <  2:1001628/140‑1 (MQ=255)
                                                                 cAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTtgatctgatc                                                                 <  2:419015/140‑1 (MQ=255)
                                                                   aaGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCtt                                                                           >  1:223261/1‑128 (MQ=255)
                                                                   aaGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCtt                                                                           <  2:223261/128‑1 (MQ=255)
                                                                   aaGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCct                                                               >  2:670240/1‑140 (MQ=255)
                                                                         gTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTgg                                                         >  2:445121/1‑140 (MQ=255)
                                                                               aTGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATgg                                                   <  1:240419/140‑1 (MQ=255)
                                                                                 gtgCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGtt                                                 <  1:1158732/140‑1 (MQ=255)
                                                                                  tgCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGttc                                                >  1:788894/1‑140 (MQ=255)
                                                                                    cTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGttctt                                              >  2:728333/1‑140 (MQ=255)
                                                                                      aTCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGCCTTTGATCTGATCCTCTGTGGCGATGGTTCTTcc                                            <  2:1111555/140‑1 (MQ=255)
                                                                                         gcgcgGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGAc                                         >  1:1020311/1‑140 (MQ=255)
                                                                                           gcgGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCt                                       <  2:450088/140‑1 (MQ=255)
                                                                                           gcgGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCt                                       <  1:445121/140‑1 (MQ=255)
                                                                                              gCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTa                                    >  2:211077/1‑140 (MQ=255)
                                                                                                ccGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATg                                  <  1:189358/140‑1 (MQ=255)
                                                                                                ccGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATg                                  <  2:86383/140‑1 (MQ=255)
                                                                                                 cGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGc                                 <  2:538536/140‑1 (MQ=255)
                                                                                                   gATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGccc                               <  2:301795/140‑1 (MQ=255)
                                                                                                   gATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGccc                               <  2:322976/140‑1 (MQ=255)
                                                                                                    aTGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCca                              <  2:687598/140‑1 (MQ=255)
                                                                                                         cTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAgg                         >  2:1075629/1‑140 (MQ=255)
                                                                                                         cTGATTGTGGTGATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAgg                         >  1:810898/1‑140 (MQ=255)
                                                                                                          tGATTGTGGTGATTGATAACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGTCCAGCAGGt                        <  1:508581/140‑1 (MQ=255)
                                                                                                             ttGTGGTGATTGATGACCTGTTCGAGTA‑AGGCACTGCCGCAACAAGCGGCGAGCGCACTGGCTGCAGGCGCCCAGACAGCAGGCTTTGATCCGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTgg                     >  2:546102/1‑140 (MQ=255)
                                                                                                                 ggtgATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAgg                         <  2:187368/132‑1 (MQ=255)
                                                                                                                 ggtgATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAgg                         >  1:187368/1‑132 (MQ=255)
                                                                                                                  gtgATTGATGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTctgc                >  1:421400/1‑140 (MQ=255)
                                                                                                                      ttgatGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTCTGCtggt            >  2:388729/1‑140 (MQ=255)
                                                                                                                      ttgatGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTCTGCtggt            <  1:670240/140‑1 (MQ=255)
                                                                                                                      ttgatGACCAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTCTGCtggt            <  1:559989/140‑1 (MQ=255)
                                                                                                                             ccAGTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTCTGCTGGTGGGCGaa     <  1:388729/140‑1 (MQ=255)
                                                                                                                                gTTCGAG‑CAAGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTCTGCTGGTGGGCGAAATc  <  1:211077/140‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                   
AAGCAACAGGCAGCAGAGGCGCAGGTGACAGCCTTAAGTGTGGGCGGTAAAGCCCTGACCAACGCCAAAGGGCGTAAAGATGTGCTATCGCGCGGCCCGGATGAACTGATTGTGGTGATTGATGACCAGTTCGAG‑C‑AGGCACTGCCGCAACAAACGGCGAGCGCACTGGCTGCAGCCGCCCAGAAAGCAGGCTTTGATCTGATCCTCTGTGGCGATGGTTCTTCCGACCTTTATGCCCAGCAGGTTGGTCTGCTGGTGGGCGAAATC  >  NC_000913/42547‑42813

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A