Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F28 I1 R1	260	73.5	2514320	99.3%	2496719	138.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,871,832	(G)_6→5	coding (1448/1476 nt)	cdgI →	putative c‑di‑GMP binding protein CdgI

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,871,827	0	G	.	100.0%	258.9 / NA	60	coding (1443/1476 nt)	cdgI	putative c‑di‑GMP binding protein CdgI
Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (33/27); total (33/27)

GACCGGCTTTAGTAACAGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAGCGGCGCAGAGATG  >  NC_000913/1871689‑1871956

gACCGGCTTTAGTAACAGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAgg                                                                                                                                  <  1:913043/140‑1 (MQ=255)

gACCGGCTTTAGTAACAGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAgg                                                                                                                                  <  1:135254/140‑1 (MQ=255)

         tAGTAACAGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGcaacaa                                                                                                                        <  1:41526/140‑1 (MQ=255)

                aGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGatt                                                                                                                 >  2:1173967/1‑140 (MQ=255)

                aGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGatt                                                                                                                 >  1:155168/1‑140 (MQ=255)

                     tgatgTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATtca                                                                                                            <  2:974327/140‑1 (MQ=255)

                          ttCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCata                                                                                                       >  1:1044792/1‑140 (MQ=255)

                          ttCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCata                                                                                                       >  1:638034/1‑140 (MQ=255)

                           tCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCatat                                                                                                      >  2:1253818/1‑140 (MQ=255)

                            ccTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATAtt                                                                                                     >  1:8383/1‑140 (MQ=255)

                            ccTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATAtt                                                                                                     >  1:397022/1‑140 (MQ=255)

                             cTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATAttt                                                                                                    <  1:1173967/140‑1 (MQ=255)

                                aaCAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGattat                                                                                                               <  2:460712/126‑1 (MQ=255)

                                aaCAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGattat                                                                                                               >  1:460712/1‑126 (MQ=255)

                                aaCAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAg                                                                                                 >  2:451234/1‑140 (MQ=255)

                                  cAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAATg                                                                                               <  1:1253818/140‑1 (MQ=255)

                                          cATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAata                                                                                       >  1:421811/1‑140 (MQ=255)

                                          cATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAata                                                                                       >  1:51093/1‑140 (MQ=255)

                                              aGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCa                                                                                   <  2:51093/140‑1 (MQ=255)

                                                tATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCaaaa                                                                                          <  1:366987/131‑1 (MQ=255)

                                                tATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCaaaa                                                                                          >  2:366987/1‑131 (MQ=255)

                                                    ggCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCaaaaa                                                                                         >  2:605221/1‑128 (MQ=255)

                                                    ggCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCaaaaa                                                                                         <  1:605221/128‑1 (MQ=255)

                                                    ggCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCa                                                                             >  1:160214/1‑140 (MQ=255)

                                                     gCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCAt                                                                            <  1:1178554/140‑1 (MQ=255)

                                                       aCGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGc                                                                          >  2:1050285/1‑140 (MQ=255)

                                                       aCGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGc                                                                          >  1:338857/1‑140 (MQ=255)

                                                       aCGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGc                                                                          >  2:779992/1‑140 (MQ=255)

                                                          gTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCa                                                                             >  2:773836/1‑134 (MQ=255)

                                                          gTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCa                                                                             <  1:773836/134‑1 (MQ=255)

                                                          gTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCttt                                                                       >  1:1072251/1‑140 (MQ=255)

                                                          gTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCttt                                                                       >  1:258406/1‑140 (MQ=255)

                                                          gTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCttt                                                                       >  2:442646/1‑140 (MQ=255)

                                                                tCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGt                                                                 <  1:974972/140‑1 (MQ=255)

                                                                     gggTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCtt                                                            >  2:569331/1‑140 (MQ=255)

                                                                     gggTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCtt                                                            <  1:456876/140‑1 (MQ=255)

                                                                            acGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATa                                                     <  1:1050285/140‑1 (MQ=255)

                                                                            acGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATa                                                     <  2:338857/140‑1 (MQ=255)

                                                                             cgcgTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATAc                                                    <  2:8383/140‑1 (MQ=255)

                                                                              gcgTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACa                                                   <  2:935108/140‑1 (MQ=255)

                                                                              gcgTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACa                                                   <  1:677004/140‑1 (MQ=255)

                                                                                 tAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAAtt                                                >  1:316620/1‑140 (MQ=255)

                                                                                   atatCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATtta                                              <  1:451234/140‑1 (MQ=255)

                                                                                         cGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACa                                                   >  1:483740/1‑129 (MQ=255)

                                                                                         cGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACa                                                   <  2:483740/129‑1 (MQ=255)

                                                                                         cGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTtattacta                                        >  1:462096/1‑140 (MQ=255)

                                                                                          gCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCa                                                       >  2:653239/1‑124 (MQ=255)

                                                                                          gCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCa                                                       <  1:653239/124‑1 (MQ=255)

                                                                                          gCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTtattactat                                       >  2:1131979/1‑140 (MQ=255)

                                                                                            ttGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTtattactatta                                     >  2:913762/1‑140 (MQ=255)

                                                                                                cATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTAcccc                                 <  2:421811/140‑1 (MQ=255)

                                                                                                    aCGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTaaa                             >  1:677469/1‑140 (MQ=255)

                                                                                                                  aGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAg               <  2:55655/140‑1 (MQ=255)

                                                                                                                  aGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAg               <  1:779992/140‑1 (MQ=255)

                                                                                                                  aGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAg               <  1:148169/140‑1 (MQ=255)

                                                                                                                  aGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAg               >  2:790044/1‑140 (MQ=255)

                                                                                                                  aGCCTTACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAg               >  2:148169/1‑140 (MQ=255)

                                                                                                                      ttACGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAgcggc           <  1:63790/140‑1 (MQ=255)

                                                                                                                        aCGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAGCGgcgc         >  1:356209/1‑140 (MQ=255)

                                                                                                                        aCGCGAAGCGAAAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAGCGgcgc         >  1:953060/1‑140 (MQ=255)

                                                                                                                             aagcgaaAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAGCGGCGCAgaga    <  1:878898/140‑1 (MQ=255)

                                                                                                                               gcgaaAAGCGA‑GGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAGCGGCGCAGAGATg  <  1:442646/140‑1 (MQ=255)

GACCGGCTTTAGTAACAGATATGATGTTCCTGAACAAATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTACCCCTAAATTTCCCCTCCCCAGCGGCGCAGAGATG  >  NC_000913/1871689‑1871956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A