Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F28 I1 R1 260 73.5 2514320 99.3% 2496719 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,089,255 T→C T71A (ACC→GCC)  yoeB ← ribosome‑dependent mRNA interferase toxin YoeB

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,089,2550TC100.0% 325.2 / NA 91T71A (ACC→GCC) yoeBribosome‑dependent mRNA interferase toxin YoeB
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (50/41);  total (50/41)

ACCTTTTTCATCCGTTATCTCCTGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGTAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGTTCATTGATCT  >  NC_000913/2089118‑2089389
                                                                                                                                         |                                                                                                                                      
aCCTTTTTCATCCGTTATCTCCTGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCaa                                                                                                                                      >  1:234831/1‑140 (MQ=255)
  cTTTTTCATCCGTTATCTCCTGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAAcc                                                                                                                                    <  1:492954/140‑1 (MQ=255)
     tttCATCCGTTATCTCCTGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCaa                                                                                                                                      >  1:900519/1‑135 (MQ=255)
                 tctcCTGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACgg                                                                                                                     <  2:997495/140‑1 (MQ=255)
                   tcCTGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTg                                                                                                                   <  2:286773/140‑1 (MQ=255)
                     cTGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGct                                                                                                                 <  2:277327/140‑1 (MQ=255)
                      tGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGctc                                                                                                                <  2:681947/140‑1 (MQ=255)
                      tGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGctc                                                                                                                <  2:936456/140‑1 (MQ=255)
                        aTACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGt                                                                                                                                >  1:285787/1‑122 (MQ=255)
                        aTACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGt                                                                                                                                <  2:285787/122‑1 (MQ=255)
                        aTACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGctcct                                                                                                              >  2:680042/1‑140 (MQ=255)
                        aTACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGctcct                                                                                                              <  2:484438/140‑1 (MQ=255)
                               ttAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAAt                                                                                                       >  2:864463/1‑140 (MQ=255)
                               ttAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCAGTAAt                                                                                                       <  2:234831/140‑1 (MQ=255)
                                tAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTg                                                                                                                   <  2:865200/127‑1 (MQ=255)
                                tAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTg                                                                                                                   >  1:865200/1‑127 (MQ=255)
                                  gATCTATAAGGCTGCGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCg                                                                                                    >  1:463183/1‑140 (MQ=255)
                                  gATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCg                                                                                                    >  1:722574/1‑140 (MQ=255)
                                      tataAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCgg                                                                                                >  1:950119/1‑140 (MQ=255)
                                       ataAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCggg                                                                                               >  2:307041/1‑140 (MQ=255)
                                        taAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGctc                                                                                                                >  2:100392/1‑122 (MQ=255)
                                        taAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGctc                                                                                                                <  1:100392/122‑1 (MQ=255)
                                        taAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGa                                                                                              >  1:512863/1‑140 (MQ=255)
                                        taAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGa                                                                                              >  2:1213363/1‑140 (MQ=255)
                                        taAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGa                                                                                              >  2:939952/1‑140 (MQ=255)
                                        taAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGa                                                                                              >  1:86873/1‑140 (MQ=255)
                                        taAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGa                                                                                              >  1:794753/1‑140 (MQ=255)
                                        taAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGa                                                                                              >  1:868121/1‑140 (MQ=255)
                                             cTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGa                                                                                         >  2:248057/1‑140 (MQ=255)
                                             cTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGa                                                                                         >  1:806673/1‑140 (MQ=255)
                                               aCGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGaaa                                                                                       >  1:468107/1‑140 (MQ=255)
                                                cGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGGTAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAAc                                                                                      >  1:1045184/1‑140 (MQ=255)
                                                cGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAAc                                                                                      >  2:1229128/1‑140 (MQ=255)
                                                     gCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGAc                                                                                 <  2:204573/140‑1 (MQ=255)
                                                     gCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGAc                                                                                 <  2:794753/140‑1 (MQ=255)
                                                      cGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACa                                                                                >  2:537428/1‑140 (MQ=255)
                                                      cGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACa                                                                                >  1:1131718/1‑140 (MQ=255)
                                                         aTCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAAt                                                                             <  2:512863/140‑1 (MQ=255)
                                                         aTCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAAt                                                                             <  2:86873/140‑1 (MQ=255)
                                                          tCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAAtt                                                                            >  2:835264/1‑140 (MQ=255)
                                                           cAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTa                                                                           <  2:778732/140‑1 (MQ=255)
                                                             aaaCTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGTGTCGGGACCAGAAACCTGACAAATTATg                                                                         >  2:316399/1‑140 (MQ=255)
                                                                   aCAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAg                                                                   >  1:3161/1‑140 (MQ=255)
                                                                   aCAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAg                                                                   >  1:253263/1‑140 (MQ=255)
                                                                   aCAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAg                                                                   >  1:603952/1‑140 (MQ=255)
                                                                              tATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCt                                                        <  1:680042/140‑1 (MQ=255)
                                                                                tgaatgaaTCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTc                                                      >  1:186428/1‑140 (MQ=255)
                                                                                tgaatgaaTCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTc                                                      >  1:237502/1‑140 (MQ=255)
                                                                                  aatgaatCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGt                                                               >  2:943471/1‑129 (MQ=255)
                                                                                  aatgaatCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGt                                                               <  1:943471/129‑1 (MQ=255)
                                                                                   atgaatCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTcccc                                                   <  1:939952/140‑1 (MQ=255)
                                                                                     gaatCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCtt                                                 >  2:767493/1‑140 (MQ=255)
                                                                                     gaatCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCtt                                                 >  2:905651/1‑140 (MQ=255)
                                                                                            ttCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCa                                          >  2:528652/1‑140 (MQ=255)
                                                                                              cAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCaaa                                        <  2:1131718/140‑1 (MQ=255)
                                                                                                 taatGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATgg                                     <  1:63968/140‑1 (MQ=255)
                                                                                                    tGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGt                                  <  2:468107/140‑1 (MQ=255)
                                                                                                      aTAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCaaa                                        <  2:928249/132‑1 (MQ=255)
                                                                                                      aTAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCaaa                                        >  1:928249/1‑132 (MQ=255)
                                                                                                      aTAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTc                                >  2:962463/1‑140 (MQ=255)
                                                                                                      aTAACGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTc                                >  1:1088537/1‑140 (MQ=255)
                                                                                                         aCGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGc                             >  1:725517/1‑140 (MQ=255)
                                                                                                         aCGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGc                             >  2:147612/1‑140 (MQ=255)
                                                                                                         aCGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGc                             >  2:76597/1‑140 (MQ=255)
                                                                                                          cGACATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCg                            <  1:905651/140‑1 (MQ=255)
                                                                                                            aCATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCggg                          <  2:463183/140‑1 (MQ=255)
                                                                                                            aCATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCggg                          <  1:767493/140‑1 (MQ=255)
                                                                                                            aCATGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCggg                          <  2:722574/140‑1 (MQ=255)
                                                                                                              aTGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTa                        <  2:950119/140‑1 (MQ=255)
                                                                                                              aTGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTa                        <  1:962463/140‑1 (MQ=255)
                                                                                                              aTGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTa                        <  1:1213363/140‑1 (MQ=255)
                                                                                                              aTGCTGCAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTa                        <  1:835264/140‑1 (MQ=255)
                                                                                                                gctgcAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCggg                          <  2:847615/136‑1 (MQ=255)
                                                                                                                gctgcAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCggg                          >  1:847615/1‑136 (MQ=255)
                                                                                                                gctgcAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATc                      >  2:1147177/1‑140 (MQ=255)
                                                                                                                 ctgcAATGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCt                     <  2:806673/140‑1 (MQ=255)
                                                                                                                     aaTGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGa                 >  2:954216/1‑140 (MQ=255)
                                                                                                                     aaTGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGa                 <  2:186428/140‑1 (MQ=255)
                                                                                                                      aTGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGAt                <  1:852116/140‑1 (MQ=255)
                                                                                                                      aTGAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGAt                <  1:954216/140‑1 (MQ=255)
                                                                                                                        gAGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATaa              <  2:525266/140‑1 (MQ=255)
                                                                                                                         aGCAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAg             >  2:370297/1‑140 (MQ=255)
                                                                                                                           cAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGtt           >  2:144993/1‑140 (MQ=255)
                                                                                                                           cAGTGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGtt           >  1:782384/1‑140 (MQ=255)
                                                                                                                              tGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGTTCAt        >  1:434252/1‑140 (MQ=255)
                                                                                                                              tGAATCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGTTCAt        >  1:676782/1‑140 (MQ=255)
                                                                                                                                aaTCGTCGGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGTTCATTg      <  1:307041/140‑1 (MQ=255)
                                                                                                                                  tcgtcgGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGTTCATTGAt    <  1:1229128/140‑1 (MQ=255)
                                                                                                                                  tcgtcgGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGTTCATTGAt    <  1:370297/140‑1 (MQ=255)
                                                                                                                                  tcgtcgGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGTTCATTGAt    <  1:248057/140‑1 (MQ=255)
                                                                                                                                    gtcgGCAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGTTCATTGATCt  >  2:150239/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                      
ACCTTTTTCATCCGTTATCTCCTGATACACCTTAGATCTATAAGGCTACGCTAGCGTATCAAAACTGACAATTCATTCTATGAATGAATCTGTTCAATAATGATAACGACATGCTGCAATGAGCAGTGAATCGTCGGTAACCGCGTATACCAGACGGTGCTCCTCTGTAATGCGTCGGGACCAGAAACCTGACAAATTATGTTTCAGGGGTTCTGGCTTCCCCTTACCTTCAAATGGCGTTCTGCGGGTATCTTTGATAAGTTCATTGATCT  >  NC_000913/2089118‑2089389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A