Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F28 I1 R1
|
260 |
73.5 |
2514320 |
99.3% |
2496719 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,262,306 |
G→A |
C20C (TGC→TGT) |
fruK ← |
1‑phosphofructokinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,262,306 | 0 | G | A | 100.0%
| 271.4
/ NA
| 76 | C20C (TGC→TGT) | fruK | 1‑phosphofructokinase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (39/37); total (39/37) |
TTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGGCAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCTGCACCCTGGG > NC_000913/2262174‑2262441
|
tttATCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAAc > 2:987334/1‑140 (MQ=255)
ccAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTTTTTTAATACTTGGGCCACGTTGATGCTTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACcaaca < 1:78952/140‑1 (MQ=255)
ggAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACcaacctgt > 1:442614/1‑136 (MQ=255)
ggAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAgg > 2:15649/1‑140 (MQ=255)
ggAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAgg > 2:1064590/1‑140 (MQ=255)
aaGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTc > 1:133688/1‑140 (MQ=255)
gccgccAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCAt > 2:233608/1‑140 (MQ=255)
gccgccAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCAt > 2:23033/1‑140 (MQ=255)
cgccAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATaa > 1:1041713/1‑140 (MQ=255)
cgccAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATaa > 1:712974/1‑140 (MQ=255)
ccatgggTGACATCATTCCCCAGGTTTTTTAATCCGTGGCCCACTTTGATGCCTTCACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGc < 2:117850/135‑1 (MQ=255)
ccAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGc < 2:1041713/140‑1 (MQ=255)
cAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGcc > 2:446694/1‑140 (MQ=255)
gTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGAtt < 1:1064590/140‑1 (MQ=255)
gTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGAtt < 1:15649/140‑1 (MQ=255)
tGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTa < 1:446694/140‑1 (MQ=255)
taaaTCCCCAGTTTTTTTAATCTTTTGGCCACGTTGATGCTTTTCCCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGt < 2:316442/138‑1 (MQ=255)
tCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGt < 1:987334/140‑1 (MQ=255)
tCAATCCCCAGTTCTTTTAATACTTTGGCCACTTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGt < 2:712974/140‑1 (MQ=255)
aaTTCCCAGGTTTTTTAATACTTTGGCCACGTTGATGCTTTTCCCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGa < 1:356993/140‑1 (MQ=255)
aaTTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGa < 2:62100/140‑1 (MQ=255)
aaTTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGa < 1:23033/140‑1 (MQ=255)
ttccccAGGTCTTTTAACGCTTTGGCCTCGTGGATTCCTTTCCCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGAt < 2:611102/137‑1 (MQ=255)
aTTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGAt > 2:12120/1‑140 (MQ=255)
ttCCCAGGTTTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGt < 2:301233/136‑1 (MQ=255)
ttCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGt > 1:301233/1‑136 (MQ=255)
ttCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGAta > 1:316442/1‑140 (MQ=255)
cccAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTCCCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGAtagt < 2:133688/140‑1 (MQ=255)
aGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGc > 2:767052/1‑140 (MQ=255)
gTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCaa > 2:670454/1‑140 (MQ=255)
ttAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGt > 2:383483/1‑140 (MQ=255)
ttAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGt > 2:1233747/1‑140 (MQ=255)
tttttGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGCTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCt < 2:1173019/138‑1 (MQ=255)
cTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGAGATAGTAGCAACACGTCTGCTc > 1:216530/1‑140 (MQ=255)
ttGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCaa > 1:729683/1‑139 (MQ=255)
ttGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCAt > 2:5430/1‑140 (MQ=255)
ttGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCAt > 1:319025/1‑140 (MQ=255)
gCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTAt > 1:184695/1‑140 (MQ=255)
cGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATgcgc > 2:645106/1‑140 (MQ=255)
gTTGATGCCTTTCCCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGcc < 1:610714/140‑1 (MQ=255)
gTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGcc > 1:941904/1‑140 (MQ=255)
gTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGcc < 2:456495/140‑1 (MQ=255)
gTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGcc < 2:184695/140‑1 (MQ=255)
gTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGcc > 1:1131753/1‑140 (MQ=255)
gTTGATGCCTTTACCAGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATgcg < 1:77797/138‑1 (MQ=255)
gTTGATGCCTTTACCAGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATgcg > 2:77797/1‑138 (MQ=255)
tGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTccc > 1:766465/1‑140 (MQ=255)
ttACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGa > 2:488645/1‑140 (MQ=255)
ccccGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGAcc < 2:941904/139‑1 (MQ=255)
aCCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGAcc > 2:753046/1‑140 (MQ=255)
aCCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGAcc > 2:530926/1‑140 (MQ=255)
ccgccgCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACcag < 1:670454/140‑1 (MQ=255)
ccgccgCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACcag < 1:645106/140‑1 (MQ=255)
cgccgcATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACcagc < 1:593193/140‑1 (MQ=255)
gcATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCg > 1:966473/1‑140 (MQ=255)
cATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCAATATGCGCCCTCCCCAAGACCAGCAGCGa < 2:729683/140‑1 (MQ=255)
aCCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTc > 2:122596/1‑140 (MQ=255)
ccGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCg > 2:219663/1‑140 (MQ=255)
tggtTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGa > 1:434006/1‑140 (MQ=255)
tggtTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGa < 2:434006/140‑1 (MQ=255)
ttttCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTg < 1:12120/140‑1 (MQ=255)
ttCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCt > 1:971448/1‑140 (MQ=255)
aCCAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAATAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTc < 2:1163799/140‑1 (MQ=255)
cAGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAg > 2:127106/1‑140 (MQ=255)
aGGTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAgc < 1:488645/140‑1 (MQ=255)
gTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAgcgc < 1:1247602/140‑1 (MQ=255)
gTTCACTTCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAgcgc < 1:127106/140‑1 (MQ=255)
ttCGCCGCGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTc < 1:219663/140‑1 (MQ=255)
cgccgcGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCACCACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAg < 2:216530/140‑1 (MQ=255)
cgccgcGTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAg < 1:233608/140‑1 (MQ=255)
cgcgTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCAt > 1:336514/1‑140 (MQ=255)
cgTTCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCt < 1:1084870/140‑1 (MQ=255)
ttCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAgcg < 2:546524/124‑1 (MQ=255)
ttCAATTTCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAgcg > 1:546524/1‑124 (MQ=255)
ttCAATTGCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCTGc > 1:1196212/1‑140 (MQ=255)
tttCCGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCTGCACCCt < 1:383483/140‑1 (MQ=255)
ccGGACAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCTGCACCCTggg < 1:5430/140‑1 (MQ=255)
|
TTTACCCAGGAAGCCGCCAACGGTGACATCAATTCCCAGGTCTTTTAATACTTTGGCCACGTTGATGCCTTTACCCGCCGCATGCAGACCGGTGGTTTTCACCAGGTTCACTTCGCCGCGTTCAATTTCCGGGCAGAAACCAACAAGGTCATAAGCCGGATTAAGGGTGATAGTAGCAACACGTCTGCTCATTATGCGCCCTCCCCAAGACCAGCAGCGATAGCGTCGCCGATTGCTTTCAGCGCCTGTTCAGCATCTGCACCCTGGG > NC_000913/2262174‑2262441
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
