Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F28 I1 R1
|
260 |
73.5 |
2514320 |
99.3% |
2496719 |
138.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,589,872 |
C→T |
A470T (GCG→ACG) |
btsT ← |
pyruvate:H(+) symporter |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,589,872 | 0 | C | T | 98.6%
| 234.0
/ ‑4.5
| 69 | A470T (GCG→ACG) | btsT | pyruvate:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (35/33); total (36/33) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.16e-01 |
TAAAGCGGCCAGAACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGCCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGTGTGCGGTAACGTCTTT > NC_000913/4589737‑4590007
|
tAAAGCGGCCAGAACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGc > 1:558858/1‑140 (MQ=255)
tAAAGCGGCCAGAACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGc > 1:279669/1‑140 (MQ=255)
aGCGGCCAGAACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTc > 1:900703/1‑140 (MQ=255)
ccAGAACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGgcgc > 1:723979/1‑140 (MQ=255)
ggTACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTg > 1:313969/1‑140 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 2:1211706/140‑1 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 1:647532/140‑1 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 1:676689/140‑1 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 1:678981/140‑1 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 2:1007650/140‑1 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 2:439899/140‑1 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 2:504783/140‑1 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 2:558858/140‑1 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 2:68227/140‑1 (MQ=255)
tACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCa < 2:931816/140‑1 (MQ=255)
cGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGt > 2:354819/1‑140 (MQ=255)
ccAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAgg < 2:900703/140‑1 (MQ=255)
cAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGa > 2:1226220/1‑140 (MQ=255)
cgcgGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAg > 2:968870/1‑140 (MQ=255)
gTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAgg < 2:181560/140‑1 (MQ=255)
gggCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCt > 1:1199541/1‑140 (MQ=255)
gggCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCt > 1:1215771/1‑140 (MQ=255)
gggCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCt > 2:1218896/1‑140 (MQ=255)
gCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCttt > 1:500786/1‑140 (MQ=255)
gCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCttt > 2:123457/1‑140 (MQ=255)
tttCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTc > 1:14225/2‑140 (MQ=255)
cTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTc > 1:1153599/1‑140 (MQ=255)
cTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTc > 2:432532/1‑140 (MQ=255)
cTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCACCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTc < 1:944818/140‑1 (MQ=255)
cGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTcgcg < 2:723979/140‑1 (MQ=255)
cGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTcgcg < 2:1199541/140‑1 (MQ=255)
gAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCTGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCgg < 2:544263/140‑1 (MQ=255)
aGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTg < 2:414288/140‑1 (MQ=255)
aTACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAg < 1:954550/140‑1 (MQ=255)
ccGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGAt < 1:628774/140‑1 (MQ=255)
ccGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGAt < 2:14225/140‑1 (MQ=255)
aGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGc > 2:672379/1‑140 (MQ=255)
tGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGAGAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGctc > 2:861904/1‑140 (MQ=255)
tGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGctc > 2:160309/1‑140 (MQ=255)
tGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGctc > 1:444871/1‑140 (MQ=255)
tGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGctc > 2:356345/1‑140 (MQ=255)
tGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGctc > 1:747995/1‑140 (MQ=255)
tGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGctc > 1:163874/1‑140 (MQ=255)
tGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGctc > 1:669744/1‑140 (MQ=255)
aTACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTg > 2:437354/1‑140 (MQ=255)
tACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTgg < 2:313969/140‑1 (MQ=255)
cccATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCAc < 2:210944/140‑1 (MQ=255)
cccATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCAc > 1:1012292/1‑140 (MQ=255)
ccATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACg < 1:119858/140‑1 (MQ=255)
cATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGa < 1:1218896/140‑1 (MQ=255)
cATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGa > 1:474693/1‑140 (MQ=255)
aTGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGaa < 1:861904/140‑1 (MQ=255)
ccATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAg > 1:1114543/1‑140 (MQ=255)
ggCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCt > 1:252050/1‑140 (MQ=255)
ggCAGCACTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCt > 1:18866/1‑140 (MQ=255)
caCTTTGTGGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACgg < 1:160309/140‑1 (MQ=255)
tgtgGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCt > 1:1023922/1‑140 (MQ=255)
tgGAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGc > 2:665539/1‑140 (MQ=255)
ggAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGcc < 1:665539/140‑1 (MQ=255)
ggAACACGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGcc < 2:669744/140‑1 (MQ=255)
cacGTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCgt > 2:1177197/1‑140 (MQ=255)
gTGCGCGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGtgtg < 1:123457/140‑1 (MQ=255)
gcgcGATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGTGTGCg > 2:1037835/1‑140 (MQ=255)
cgcgATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGTGTGCgg < 2:1153599/140‑1 (MQ=255)
gATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGTGTGCGGTaa < 2:1114543/140‑1 (MQ=255)
gATACCTACCGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGTGTGCGGTaa < 1:437354/140‑1 (MQ=255)
gATACCTACCGTCAGCGTCAGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGTGTGCGGTaa < 2:160074/140‑1 (MQ=255)
tacctaccGTCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGTGTGCGGTAACg > 2:1202998/1‑140 (MQ=255)
accGCCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGTGTGCGGTAACGTCttt > 1:1116228/1‑140 (MQ=255)
|
TAAAGCGGCCAGAACGGGTACCCGCATCCAGCGCGGTCAGGATGAACAGGGCTTCGAACAGAATACCGAAGTGATACCAGAAGCCCATGTCAGCCATCGGCAGCACTTTGTGGAACACGTGCGCGATACCTACCGCCAGCGTCGGCGCGCCACCTGCACGGTTCAGGACAGAAGGCTCACCAATGTCTTTCGCGGTTTGCAGGATCTGCTCTGGCGAAATCACGAAGCCCCAGGAGCTGACGGTCGCTGCCGCGTGTGCGGTAACGTCTTT > NC_000913/4589737‑4590007
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
