Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A12 F28 I1 R1	227	52.0	1764248	99.3%	1751898	138.7

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,449,340	T→C	V670V (GTA→GTG)	tynA ←	copper‑containing amine oxidase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,449,340	0	T	C	100.0%	246.0 / NA	72	V670V (GTA→GTG)	tynA	copper‑containing amine oxidase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (37/35); total (37/35)

CCGGTGGTCATCCAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTTACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCATAAGGAATAATTTGATAGGAAACCGGATTGCCCATGC  >  NC_000913/1449203‑1449473

ccGGTGGTCATCCAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCAc                                                                                                                                     >  1:238368/1‑140 (MQ=255)

ccGGTGGTCATCCAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCAc                                                                                                                                     <  1:494573/140‑1 (MQ=255)

   gtggtCATCCAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCa                                                                                                                                  >  1:414916/1‑140 (MQ=255)

     ggtCATCCAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCaga                                                                                                                                >  1:114468/1‑140 (MQ=255)

     ggtCATCCAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCaga                                                                                                                                >  1:242171/1‑140 (MQ=255)

        cATCCAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAgct                                                                                                                             >  2:577932/1‑140 (MQ=255)

         aTCCAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAgctg                                                                                                                            <  2:261080/140‑1 (MQ=255)

            cAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTAATGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCtt                                                                                                                         <  2:824066/140‑1 (MQ=255)

                   cGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATa                                                                                                                  >  2:204334/1‑140 (MQ=255)

                   cGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATa                                                                                                                  <  1:60185/140‑1 (MQ=255)

                   cGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATa                                                                                                                  >  2:748740/1‑140 (MQ=255)

                    ggCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATaa                                                                                                                 >  1:304652/1‑140 (MQ=255)

                        tCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCt                                                                                                             <  2:428904/140‑1 (MQ=255)

                        tCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCt                                                                                                             <  2:238368/140‑1 (MQ=255)

                            tgttgtCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTaaa                                                                                                         <  1:144491/140‑1 (MQ=255)

                            tgttgtCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTaaa                                                                                                         <  1:204334/140‑1 (MQ=255)

                             gttgtCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAAc                                                                                                        <  2:114468/140‑1 (MQ=255)

                                  ccAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACgatga                                                                                                   <  2:191302/140‑1 (MQ=255)

                                      cGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGa                                                                                               >  2:817582/1‑140 (MQ=255)

                                          tCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCa                                                                                           >  2:784074/1‑140 (MQ=255)

                                                tCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTc                                                                                     <  1:413271/140‑1 (MQ=255)

                                                         tATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGaa                                                                            >  1:321255/1‑140 (MQ=255)

                                                         tATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGaa                                                                            >  1:42682/1‑140 (MQ=255)

                                                         tATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGaa                                                                            <  1:817582/140‑1 (MQ=255)

                                                          aTTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAAc                                                                           >  2:26352/1‑140 (MQ=255)

                                                              tCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGa                                                                             <  1:704711/134‑1 (MQ=255)

                                                              tCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGa                                                                             >  2:704711/1‑134 (MQ=255)

                                                              tCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTggg                                                                       >  1:615048/1‑140 (MQ=255)

                                                              tCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTggg                                                                       >  2:274091/1‑140 (MQ=255)

                                                              tCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTggg                                                                       <  1:425367/140‑1 (MQ=255)

                                                              tCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTggg                                                                       >  1:443257/1‑140 (MQ=255)

                                                              tCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTggg                                                                       >  2:104901/1‑140 (MQ=255)

                                                                cAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCa                                                                     >  1:416611/1‑140 (MQ=255)

                                                                   gACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCt                                                                  >  1:163030/1‑140 (MQ=255)

                                                                   gACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCt                                                                  >  1:181778/1‑140 (MQ=255)

                                                                        gtgtCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCtt                                                                 >  1:693458/1‑136 (MQ=255)

                                                                        gtgtCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCtt                                                                 <  2:693458/136‑1 (MQ=255)

                                                                        gtgtCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGc                                                             >  2:443155/1‑140 (MQ=255)

                                                                        gtgtCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGc                                                             >  1:582484/1‑140 (MQ=255)

                                                                        gtgtCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGc                                                             >  1:89272/1‑140 (MQ=255)

                                                                        gtgtCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGc                                                             >  1:646079/1‑140 (MQ=255)

                                                                           tCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTAc                                                          >  1:524121/1‑140 (MQ=255)

                                                                           tCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTAc                                                          <  2:181778/140‑1 (MQ=255)

                                                                            cATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTAcc                                                         <  1:577932/140‑1 (MQ=255)

                                                                              tGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCgg                                                       >  2:124975/1‑140 (MQ=255)

                                                                              tGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCgg                                                       <  2:615048/140‑1 (MQ=255)

                                                                               gAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCggg                                                      <  1:350531/140‑1 (MQ=255)

                                                                               gAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTACATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCggg                                                      <  2:758759/140‑1 (MQ=255)

                                                                                aGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATATTTCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGt                                                     <  1:664571/140‑1 (MQ=255)

                                                                                aGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGt                                                     <  2:611357/140‑1 (MQ=255)

                                                                                    gAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGt                                                 <  2:89272/140‑1 (MQ=255)

                                                                                     aaCGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCggg                                                      <  1:618564/134‑1 (MQ=255)

                                                                                     aaCGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCggg                                                      >  2:618564/1‑134 (MQ=255)

                                                                                     aaCGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCgg                                                       >  2:735409/1‑133 (MQ=255)

                                                                                     aaCGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCgg                                                       <  1:735409/133‑1 (MQ=255)

                                                                                     aaCGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTa                                                >  1:596901/1‑140 (MQ=255)

                                                                                         gTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTaccac                                            <  1:104901/140‑1 (MQ=255)

                                                                                          ttCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTaccacc                                           >  1:271281/1‑140 (MQ=255)

                                                                                          ttCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTaccacc                                           >  2:269898/1‑140 (MQ=255)

                                                                                          ttCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTacca                                             >  1:705754/1‑138 (MQ=255)

                                                                                          ttCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTacca                                             <  2:705754/138‑1 (MQ=255)

                                                                                           tCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCt                                          <  1:124975/140‑1 (MQ=255)

                                                                                            cGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTAc                                                          <  2:101798/123‑1 (MQ=255)

                                                                                            cGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTAc                                                          >  1:101798/1‑123 (MQ=255)

                                                                                            cGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTg                                         >  1:66379/1‑140 (MQ=255)

                                                                                              gATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCa                                       <  1:748740/140‑1 (MQ=255)

                                                                                                               aaaCGCTCGCCAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCATAAGGAATAATTTGATa                      <  2:304652/140‑1 (MQ=255)

                                                                                                                        ccAGGATGATAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCATAAGGAATAATTTGATAGGAAACCgg             <  1:26352/140‑1 (MQ=255)

                                                                                                                                 tAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCATAAGGAATAATTTGATAGGAAACCGGATTGCCCAt    <  2:42682/140‑1 (MQ=255)

                                                                                                                                 tAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCATAAGGAATAATTTGATAGGAAACCGGATTGCCCAt    <  2:163030/140‑1 (MQ=255)

                                                                                                                                 tAACGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCATAAGGAATAATTTGATAGGAAACCGGATTGCCCAt    >  2:591589/1‑140 (MQ=255)

                                                                                                                                  aaCGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCATAAGGAATAATTTGATAGGAAACCGGATTGCCCATg   <  1:591589/140‑1 (MQ=255)

                                                                                                                                   aCGCGTCACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCATAAGGAATAATTTGATAGGAAACCGGATTGCCCATGc  <  2:416611/140‑1 (MQ=255)

CCGGTGGTCATCCAGACAACGGCGTCGGTGTTGTCCAGCGACTCGTTATCCTTACTGTATTGTCCAAGACCGGTGTCATGAGTAGAACGGTTCGGATATTTGCCTTCCGGGAAACGCTCGCCAGGATGATAACGCGTTACCCAGAGCTGCTTGTCCATAAAGCTTAAACGATGATAGATCCACTCGTCCGGCGCGAACTGGGCACCTTTTGCTACCGGGTGAGTACCACCTGCATAAGGAATAATTTGATAGGAAACCGGATTGCCCATGC  >  NC_000913/1449203‑1449473

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A