Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F28 I1 R1	124	90.1	3003320	99.2%	2979293	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,750,415	A→G	L200P (CTA→CCA)	ydhX ←	putative 4Fe‑4S ferredoxin‑type protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,750,415	0	A	G	98.3%	204.8 / ‑4.8	58	L200P (CTA→CCA)	ydhX	putative 4Fe‑4S ferredoxin‑type protein
Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (28/29); total (29/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

CGGGAGTGAACTGTGGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTAGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGCCTTTTGCCAGTCGGGACTCAGC  >  NC_000913/1750279‑1750551

cGGGAGTGAACTGTGGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCt                                                                                                                                       <  2:1102427/140‑1 (MQ=255)

  ggAGTGAACTGTGGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGa                                                                                                                                     <  2:1082312/140‑1 (MQ=255)

       gAACTGTGGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTg                                                                                                                                <  1:438392/140‑1 (MQ=255)

        aaCTGTGGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGa                                                                                                                               <  1:1152194/140‑1 (MQ=255)

         aCTGTGGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGAt                                                                                                                              <  2:370523/140‑1 (MQ=255)

         aCTGTGGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGAt                                                                                                                              <  1:1237894/140‑1 (MQ=255)

          cTGTGGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATa                                                                                                                             <  1:1133491/140‑1 (MQ=255)

             tgGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGta                                                                                                                          >  2:34751/1‑140 (MQ=255)

             tgGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGta                                                                                                                          >  1:456393/1‑140 (MQ=255)

              ggCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGtat                                                                                                                         <  2:705654/140‑1 (MQ=255)

               gCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGtatt                                                                                                                        >  2:885012/1‑140 (MQ=255)

                  caTAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGtatttat                                                                                                                     <  2:1265965/140‑1 (MQ=255)

                  caTAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGtatttat                                                                                                                     >  1:788637/1‑140 (MQ=255)

                    tAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGATCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTatttattt                                                                                                                   <  1:1126449/140‑1 (MQ=255)

                    tAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTatttattt                                                                                                                   <  1:770057/140‑1 (MQ=255)

                       ttCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTtgc                                                                                                                >  2:579192/1‑140 (MQ=255)

                         cGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTtgctg                                                                                                              >  1:113973/1‑140 (MQ=255)

                               cTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCa                                                                                                        >  2:1013470/1‑140 (MQ=255)

                                 ggCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACg                                                                                                      >  1:689078/1‑140 (MQ=255)

                                   ctctGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGcc                                                                                                    >  2:1264466/1‑140 (MQ=255)

                                      tGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGa                                                                                                 >  1:563920/1‑140 (MQ=255)

                                              ttCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTgg                                                                                         <  1:885012/140‑1 (MQ=255)

                                                 aGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCt                                                                                      <  1:359835/140‑1 (MQ=255)

                                                      gTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCtt                                                                                 <  2:563920/140‑1 (MQ=255)

                                                        tGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTcg                                                                               >  2:1491366/1‑140 (MQ=255)

                                                        tGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTCGCTGCAACCACGCCTGAATTTCTGGGCTATCTTcg                                                                               >  1:1387541/1‑140 (MQ=255)

                                                        tGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGCGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTcg                                                                               >  2:1237668/1‑140 (MQ=255)

                                                         gCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTcgc                                                                              <  1:940526/140‑1 (MQ=255)

                                                           gACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGa                                                                            <  1:459197/140‑1 (MQ=255)

                                                               ggTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCaa                                                                        <  1:1290310/140‑1 (MQ=255)

                                                                 ttCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAg                                                                      >  1:596208/1‑140 (MQ=255)

                                                                   cATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGAt                                                                    >  1:325886/1‑140 (MQ=255)

                                                                   cATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGAt                                                                    >  1:136009/1‑140 (MQ=255)

                                                                    aTACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATc                                                                   <  1:34751/140‑1 (MQ=255)

                                                                    aTACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATc                                                                   <  2:268820/140‑1 (MQ=255)

                                                                    aTACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATc                                                                   <  2:62012/140‑1 (MQ=255)

                                                                         ttttCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGc                                                              <  1:579192/140‑1 (MQ=255)

                                                                          tttCCTTTTTAATCAAATGTTGCCCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGGGGCTGATATTGATAGAATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCg                                                             >  2:570445/1‑140 (MQ=255)

                                                                          tttCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCg                                                             >  1:1032820/1‑140 (MQ=255)

                                                                          tttCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCg                                                             >  1:1247600/1‑140 (MQ=255)

                                                                          tttCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCg                                                             <  2:500120/140‑1 (MQ=255)

                                                                          tttCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCg                                                             >  2:1203357/1‑140 (MQ=255)

                                                                          tttCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCg                                                             >  1:575676/1‑140 (MQ=255)

                                                                            tCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCgtg                                                           >  1:493649/1‑140 (MQ=255)

                                                                              cTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGtt                                                         >  2:1394515/1‑140 (MQ=255)

                                                                                ttttAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTcc                                                       >  2:532350/1‑140 (MQ=255)

                                                                                          aTGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGgcgc                                             <  2:1433419/140‑1 (MQ=255)

                                                                                                   gAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCaaa                                    <  1:1234316/140‑1 (MQ=255)

                                                                                                    aaCCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAAt                                   >  1:1204331/1‑140 (MQ=255)

                                                                                                     aCCGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATg                                  <  2:456393/140‑1 (MQ=255)

                                                                                                      ccGGCGATACAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATgg                                 <  2:596208/140‑1 (MQ=255)

                                                                                                         gCGATACAGATGCGGTTTCCCGGCACCAGGTAGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCg                              >  1:381319/1‑140 (MQ=255)

                                                                                                               cAGATGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGc                        >  1:861675/1‑140 (MQ=255)

                                                                                                               cAGATGAGGTTTCCAGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGACCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGc                        <  2:1079212/140‑1 (MQ=255)

                                                                                                                  aTGCGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGCCtt                     >  1:676927/1‑140 (MQ=255)

                                                                                                                     cGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGCCTTTTg                  <  2:1247600/140‑1 (MQ=255)

                                                                                                                     cGGTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGCCTTTTg                  <  1:37802/140‑1 (MQ=255)

                                                                                                                       gTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGCCTTTTGcc                <  2:689078/140‑1 (MQ=255)

                                                                                                                       gTTTCCCGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGCCTTTTGcc                >  2:1164634/1‑140 (MQ=255)

                                                                                                                            ccGGCACCAGGTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGCCTTTTGCCAGTCg           >  1:1496096/1‑140 (MQ=255)

                                                                                                                                     ggTGGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGCCTTTTGCCAGTCGGGACTCAgc  >  2:25844/1‑140 (MQ=255)

CGGGAGTGAACTGTGGCACATAGTTCGCTAACTGGCTCTGAAACTGTTCAGCATGTTGCGACGGGTTCATACATTTTCCTTTTTAATCAAATGTTGACCGAACCGGCGATACAGATGCGGTTTCCCGGCACCAGGTAGCTGATATTGATAGTATTTATTTTGCTGCAACCACGCCTGAATTTCTGGGCTATCTTCGCGACCAAAGATCAATGCGTGTTCCGGGCAGGCGCTGACGCAAATGGGCGGAAAGCCTTTTGCCAGTCGGGACTCAGC  >  NC_000913/1750279‑1750551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A