Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A3 F28 I1 R1	124	90.1	3003320	99.2%	2979293	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,930,522	T→C	K76E (AAA→GAA)	yebG ←	DNA damage‑inducible protein YebG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,930,522	0	T	C	100.0%	289.0 / NA	76	K76E (AAA→GAA)	yebG	DNA damage‑inducible protein YebG
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (39/37); total (39/37)

TTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGATCCGCCGTATCAAGCATT  >  NC_000913/1930385‑1930658

tttCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGc                                                                                                                                        <  1:1068582/140‑1 (MQ=255)

tttCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGc                                                                                                                                        <  1:239736/140‑1 (MQ=255)

     tGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACTTGTGGGGACGGTAATTCGCCGGtt                                                                                                                                   <  2:743860/140‑1 (MQ=255)

       tttttCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGtttt                                                                                                                                 <  2:396233/140‑1 (MQ=255)

         tttCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCa                                                                                                                               <  2:628043/140‑1 (MQ=255)

         tttCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCa                                                                                                                               <  2:1136304/140‑1 (MQ=255)

         tttCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCa                                                                                                                               <  1:1385929/140‑1 (MQ=255)

            ctcCATAGCACAATGATTCAGGAGAAAGCATGGTACACATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGaa                                                                                                                            <  2:136254/140‑1 (MQ=255)

            ctcCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGaa                                                                                                                            <  1:312208/140‑1 (MQ=255)

            ctcCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGaa                                                                                                                            <  2:819852/140‑1 (MQ=255)

            ctcCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGaa                                                                                                                            <  2:1190029/140‑1 (MQ=255)

            ctcCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGaa                                                                                                                            <  2:1183577/140‑1 (MQ=255)

                  aGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGc                                                                                                                      >  1:1246746/1‑140 (MQ=255)

                    cacaATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTc                                                                                                                    >  2:887926/1‑140 (MQ=255)

                        aTGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGca                                                                                                                <  2:518617/140‑1 (MQ=255)

                         tGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGcac                                                                                                               >  2:37590/1‑140 (MQ=255)

                         tGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGcac                                                                                                               >  1:1253766/1‑140 (MQ=255)

                         tGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGcac                                                                                                               >  1:95877/1‑140 (MQ=255)

                         tGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGcac                                                                                                               >  2:698286/1‑140 (MQ=255)

                          gATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGcaca                                                                                                              <  2:256687/140‑1 (MQ=255)

                                 gagaAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCttttt                                                                                                       >  1:1196323/1‑140 (MQ=255)

                                  agaAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTg                                                                                                      <  1:465256/140‑1 (MQ=255)

                                  agaAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTg                                                                                                      <  2:791021/140‑1 (MQ=255)

                                   gaAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGt                                                                                                     <  1:1222871/140‑1 (MQ=255)

                                      aGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCATCACATCTTTTTGTTCt                                                                                                  <  2:1029640/140‑1 (MQ=255)

                                      aGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCt                                                                                                  >  2:704956/1‑140 (MQ=255)

                                        cATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgc                                                                                                <  1:1244031/140‑1 (MQ=255)

                                         aTGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgcc                                                                                               <  2:1253766/140‑1 (MQ=255)

                                           ggTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgccag                                                                                             >  1:612355/1‑140 (MQ=255)

                                           ggTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgccag                                                                                             >  1:63818/1‑140 (MQ=255)

                                           ggTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgccag                                                                                             >  2:683926/1‑140 (MQ=255)

                                              aCAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgccagcca                                                                                          >  2:507569/1‑140 (MQ=255)

                                                 aaTTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGGCCTGTGGGGACGGTAATTCGCCGGTTGTCAGAATGGTGCTCAGCACATCTTTTTGTCCTGCCAGCCATAg                                                                                       <  2:772732/140‑1 (MQ=255)

                                                  aTTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGc                                                                                      >  2:1010167/1‑140 (MQ=255)

                                                  aTTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGc                                                                                      >  1:242007/1‑140 (MQ=255)

                                                       cAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAg                                                                                 >  2:1419056/1‑140 (MQ=255)

                                                       cAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAg                                                                                 >  1:410995/1‑140 (MQ=255)

                                                           aGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCt                                                                             >  2:1411826/1‑140 (MQ=255)

                                                            gcgcAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCtt                                                                            >  2:610676/1‑140 (MQ=255)

                                                              gcAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCa                                                                          <  1:1363253/140‑1 (MQ=255)

                                                              gcAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCa                                                                          <  2:318278/140‑1 (MQ=255)

                                                                     gCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCt                                                                   <  1:887926/140‑1 (MQ=255)

                                                                          aGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCt                                                              <  1:167988/140‑1 (MQ=255)

                                                                            gCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTc                                                            >  1:1230563/1‑140 (MQ=255)

                                                                             ccGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCTAAAGGGCTTCACGTTGCTCGTCTTcc                                                           <  2:1246746/140‑1 (MQ=255)

                                                                              cgcgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCa                                                          >  2:895444/1‑140 (MQ=255)

                                                                                cgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAtt                                                        >  1:547463/1‑140 (MQ=255)

                                                                                cgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAtt                                                        >  1:512/1‑140 (MQ=255)

                                                                                cgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAtt                                                        >  1:227335/1‑140 (MQ=255)

                                                                                cgTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCAtt                                                        >  1:1032548/1‑140 (MQ=255)

                                                                                  tgtgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTg                                                      <  2:95877/140‑1 (MQ=255)

                                                                                    tgAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCa                                                    <  2:63818/140‑1 (MQ=255)

                                                                                      aGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACt                                                  >  2:898398/1‑140 (MQ=255)

                                                                                      aGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACt                                                  >  2:306218/1‑140 (MQ=255)

                                                                                       ggCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTACCATTTGCACTg                                                 <  1:919549/140‑1 (MQ=255)

                                                                                           tCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGTCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGgaga                                             >  1:12793/1‑140 (MQ=255)

                                                                                            cTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGaa                                            >  2:1056090/1‑140 (MQ=255)

                                                                                                  ctTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTc                                      >  2:171353/1‑140 (MQ=255)

                                                                                                     cGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGc                                   >  2:211955/1‑140 (MQ=255)

                                                                                                     cGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGc                                   >  2:1047222/1‑140 (MQ=255)

                                                                                                     cGGATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGc                                   >  1:967127/1‑140 (MQ=255)

                                                                                                      ggATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCTCATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGcc                                  <  1:1077298/140‑1 (MQ=255)

                                                                                                      ggATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGcc                                  <  1:698286/140‑1 (MQ=255)

                                                                                                      ggATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGcc                                  <  1:1419056/140‑1 (MQ=255)

                                                                                                      ggATTCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGcc                                  <  2:612355/140‑1 (MQ=255)

                                                                                                          tCAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGgt                              <  1:1010167/140‑1 (MQ=255)

                                                                                                           cAGCACCGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGgtg                             <  1:683926/140‑1 (MQ=255)

                                                                                                                ccGACGACCTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAg                        <  1:514332/140‑1 (MQ=255)

                                                                                                                   ccgacCTGGGGGGAGGGTATTTCGCCGGTTTTCAGAATGGTGCTCAGCACATTTTTTTGTTCTGCCAGCCATGGGGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAg                     <  2:1196323/139‑1 (MQ=255)

                                                                                                                    cgcccTGTGGGGACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGa                    <  2:916526/137‑1 (MQ=255)

                                                                                                                             gggACGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGATCCGCCGTa           >  2:596804/1‑140 (MQ=255)

                                                                                                                                aCGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGATCCGCCGTATCa        >  1:531748/1‑140 (MQ=255)

                                                                                                                                 cGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGATCCGCCGTATCaa       >  2:513288/1‑140 (MQ=255)

                                                                                                                                 cGGTAATTCGCAGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGAGTCAAGCAGATCCGCCGTATCaa       >  2:1365654/1‑140 (MQ=255)

                                                                                                                                  ggTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGATCCGCCGTATCAAg      >  2:1184683/1‑140 (MQ=255)

                                                                                                                                  ggTAATTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGATCCGCCGTATCAAg      >  1:1273012/1‑140 (MQ=255)

                                                                                                                                     aaTTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGATCCGCCGTATCAAGCAt   >  1:497106/1‑140 (MQ=255)

                                                                                                                                      aTTCGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGATCCGCCGTATCAAGCAtt  <  1:171353/140‑1 (MQ=255)

TTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATTTGTCAGCCAGGTGTCAAGCAGATCCGCCGTATCAAGCATT  >  NC_000913/1930385‑1930658

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A