Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
124 |
90.1 |
3003320 |
99.2% |
2979293 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,926,469 |
G→A |
L54L (TTG→TTA) |
ppnN → |
nucleotide 5'‑monophosphate nucleosidase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,926,469 | 0 | G | A | 100.0%
| 375.3
/ NA
| 108 | L54L (TTG→TTA) | ppnN | nucleotide 5'‑monophosphate nucleosidase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (61/47); total (61/47) |
Only 100 of 108 total aligned reads displayed.
CTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCG > NC_000913/2926334‑2926602
|
cTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGt > 2:2112/1‑140 (MQ=255)
tCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGtc < 1:1210482/140‑1 (MQ=255)
tGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGt > 2:238520/1‑140 (MQ=255)
tatGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTg > 1:287334/1‑140 (MQ=255)
atGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGa > 2:1280832/1‑140 (MQ=255)
gtCGCAGCTGGAAGTGGATATGCTTAAATGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAAtt > 2:1109211/1‑140 (MQ=255)
tCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAAttt > 1:926505/1‑140 (MQ=255)
tCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAAttt < 2:202782/140‑1 (MQ=255)
cGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTc > 2:1133846/1‑140 (MQ=255)
cGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTc > 2:373487/1‑140 (MQ=255)
gCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCg < 1:257561/140‑1 (MQ=255)
gCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCg > 2:894246/1‑140 (MQ=255)
gCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCg > 2:269435/1‑140 (MQ=255)
ccaaatGGAAGTGGATAAGCTTAAACGCACCGCCAGCAGCGACATCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCg < 1:564500/135‑1 (MQ=255)
cAGCTGGAAGTGGATATGCTTAATCGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGa < 2:404747/140‑1 (MQ=255)
cAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGa > 1:1264700/1‑140 (MQ=255)
ggAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTa < 1:1442059/140‑1 (MQ=255)
ggAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTa < 1:252338/140‑1 (MQ=255)
gATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCtt < 2:807444/140‑1 (MQ=255)
tatGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTgc < 2:441267/140‑1 (MQ=255)
tGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTgcgc > 2:376528/1‑140 (MQ=255)
tGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTgcgc < 1:2112/140‑1 (MQ=255)
ttAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGt < 1:776283/140‑1 (MQ=255)
tAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTg > 1:662622/1‑140 (MQ=255)
aaaCGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGa > 1:1410862/1‑140 (MQ=255)
aaCGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGaa > 2:803772/1‑140 (MQ=255)
aCGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAAc > 2:799903/1‑140 (MQ=255)
cACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAAcgcg > 1:314828/1‑140 (MQ=255)
aCCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTTCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAGAATTTCGATATTAACGTCTTGCGCCGTGAACgcgg > 1:1246185/1‑140 (MQ=255)
aCCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGTGCCGTGAACgcgg > 1:1149257/1‑140 (MQ=255)
aCCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACgcgg > 2:1353011/1‑140 (MQ=255)
aCCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACgcgg > 2:1487602/1‑140 (MQ=255)
aCCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACgcgg > 1:835895/1‑140 (MQ=255)
aCCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACgcgg > 1:951401/1‑140 (MQ=255)
aCCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACgcgg > 1:157747/1‑140 (MQ=255)
aCCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACgcgg > 2:554471/1‑140 (MQ=255)
aCCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACgcgg > 2:428132/1‑140 (MQ=255)
ccGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACgcggc > 1:712028/1‑140 (MQ=255)
gCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGt < 1:270660/140‑1 (MQ=255)
ccAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTa > 2:718245/1‑140 (MQ=255)
ccAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTa < 1:123423/140‑1 (MQ=255)
cagcGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGc < 2:445242/140‑1 (MQ=255)
cagcGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGc < 2:251699/140‑1 (MQ=255)
cagcGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGc < 1:1261175/140‑1 (MQ=255)
cagcGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGc < 1:8180/140‑1 (MQ=255)
aCCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGaa < 2:930985/140‑1 (MQ=255)
tATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGAt > 2:7955/1‑140 (MQ=255)
tCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTa > 1:774090/1‑140 (MQ=255)
tCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTa < 2:945137/140‑1 (MQ=255)
cTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATcc > 1:1102211/1‑140 (MQ=255)
cTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATcc > 1:703143/1‑140 (MQ=255)
tGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATccc < 1:1285335/140‑1 (MQ=255)
gTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTTGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATcccc < 1:477992/140‑1 (MQ=255)
gTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATcccc < 1:319835/140‑1 (MQ=255)
tttCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATccccc > 2:1432145/1‑140 (MQ=255)
tttCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATccccc > 1:919136/1‑140 (MQ=255)
ttCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCGAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCg > 1:1458422/1‑140 (MQ=255)
ttCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCg > 1:412198/1‑140 (MQ=255)
cGCAGCTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGa > 1:896163/1‑140 (MQ=255)
cGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGa < 1:297940/140‑1 (MQ=255)
gCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGaa < 1:205721/140‑1 (MQ=255)
gCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGaa < 1:62864/140‑1 (MQ=255)
cAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAag < 2:1179359/140‑1 (MQ=255)
cTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAgg < 1:1280832/140‑1 (MQ=255)
gTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCt > 2:542542/1‑140 (MQ=255)
ttCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCtt > 1:1153000/1‑140 (MQ=255)
ttCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCtt > 1:923662/1‑140 (MQ=255)
ttCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCtt > 1:236216/1‑140 (MQ=255)
ttGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTc > 1:1210414/1‑140 (MQ=255)
gCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGa < 2:1090879/140‑1 (MQ=255)
gCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGa > 1:719741/1‑140 (MQ=255)
gCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGa > 2:248640/1‑140 (MQ=255)
gCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGa < 1:67523/140‑1 (MQ=255)
gTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATgg < 1:700299/140‑1 (MQ=255)
gTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATgg > 1:351507/1‑140 (MQ=255)
aaCTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAat > 1:763535/1‑140 (MQ=255)
aaCTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAat > 1:1317128/1‑140 (MQ=255)
cTCCGGTAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGGatta > 2:818805/1‑140 (MQ=255)
tAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTcgcg < 1:450032/140‑1 (MQ=255)
tAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTcgcg < 1:413070/140‑1 (MQ=255)
tAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTcgcg < 1:1487602/140‑1 (MQ=255)
tAGTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTcgcg < 2:893471/140‑1 (MQ=255)
tAGTTTAACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTcgcg < 2:314828/140‑1 (MQ=255)
gTTTGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCTCGCt > 2:404108/1‑140 (MQ=255)
gTTTGACCGATAACAGCAAAGAATTACTGTCGCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCt > 2:827499/1‑140 (MQ=255)
tGACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTg < 2:774090/140‑1 (MQ=255)
gACCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGc < 1:428132/140‑1 (MQ=255)
aCCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCa > 2:200154/1‑140 (MQ=255)
aCCGATAACAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAAAGGCTTTTGTGGATGGGCGAATTATTCGCGCTTGGcg > 1:918513/1‑139 (MQ=255)
aaCAGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCaa > 1:1030627/1‑140 (MQ=255)
aGCAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACtt < 1:999534/140‑1 (MQ=255)
cAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGt > 1:188099/1‑140 (MQ=255)
cAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGt > 2:862990/1‑140 (MQ=255)
cAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGt < 2:1410862/140‑1 (MQ=255)
cAAAGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGt > 2:990569/1‑140 (MQ=255)
aaaGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGtt > 1:82637/1‑140 (MQ=255)
aGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTcg < 1:248640/140‑1 (MQ=255)
aGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTcg < 2:157747/140‑1 (MQ=255)
aGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTcg < 2:82637/140‑1 (MQ=255)
aGAATTACTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTcg > 2:1220118/1‑140 (MQ=255)
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CTCCATGGATATGTTGTCGCAGCTGGAAGTGGATATGCTTAAACGCACCGCCAGCAGCGACCTCTATCAACTGTTTCGCAACTGTTCACTTGCCGTACTGAACTCCGGTAGTTTGACCGATAACAGCAAAGAATTGCTGTCTCGTTTTGAAAATTTCGATATTAACGTCTTGCGCCGTGAACGCGGCGTAAAGCTGGAACTGATTAATCCCCCGGAAGAGGCTTTTGTCGATGGGCGAATTATTCGCGCTTTGCAGGCCAACTTGTTCG > NC_000913/2926334‑2926602
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
