Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F28 I1 R1
|
124 |
90.1 |
3003320 |
99.2% |
2979293 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,393,614 |
G→A |
A882V (GCC→GTC) |
yhdP ← |
AsmA2 domain‑containing protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,393,614 | 0 | G | A | 100.0%
| 318.3
/ NA
| 93 | A882V (GCC→GTC) | yhdP | AsmA2 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (55/38); total (55/38) |
CGAAACAATACTCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGGCACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGCGGCTATTGAAATG > NC_000913/3393478‑3393747
|
cGAACCAATGCTCAGGTTCTTCATTTGCTGTTTTCCCAATGACAACATAGGCGTATGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGacac < 2:1325594/140‑1 (MQ=255)
aTACTCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCCCCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCAt < 2:1155695/140‑1 (MQ=255)
aTACTCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCAt > 2:164412/1‑140 (MQ=255)
tACTCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATc > 1:888178/1‑140 (MQ=255)
aCTCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATcg < 1:1073552/140‑1 (MQ=255)
aCTCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATcg < 1:515494/140‑1 (MQ=255)
cTCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATcgg > 1:410527/1‑140 (MQ=255)
cTCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATcgg > 2:553690/1‑140 (MQ=255)
tCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATcggc < 1:624997/140‑1 (MQ=255)
cAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATcggcg < 1:1319881/140‑1 (MQ=255)
aGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATcggcga > 2:465424/1‑139 (MQ=255)
ggTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCggcggc < 2:1373078/140‑1 (MQ=255)
ggTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCggcggc < 1:949651/140‑1 (MQ=255)
ggTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCggcggc < 1:1409681/140‑1 (MQ=255)
gTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCa > 1:1064025/1‑140 (MQ=255)
aTTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCatat > 1:505783/1‑140 (MQ=255)
aTTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCatat > 1:500779/1‑140 (MQ=255)
tCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTg > 1:968376/1‑140 (MQ=255)
tCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTg > 1:1297482/1‑140 (MQ=255)
tCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTg > 2:1482510/1‑140 (MQ=255)
ttGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGtt > 1:154215/1‑140 (MQ=255)
tGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTc > 1:1140536/1‑140 (MQ=255)
tGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTc > 2:111316/1‑140 (MQ=255)
gtgctgtCCCAGTAACAGCATAGGCTTACGTAACGTTTTGTGTTGTGGGAACCTCGTTGCACCGCCGACGCACTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCaa < 2:1061567/134‑1 (MQ=255)
cTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCaa > 2:480254/1‑140 (MQ=255)
gacttCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCCCCGCAGCGCCTTTCTGGAACAGAGCCAGCCACTCGACACCATTCATCGCCGGCATATTGAGATCAACg > 2:599341/4‑140 (MQ=255)
tAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAAc > 1:1439160/1‑140 (MQ=255)
ggCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAAcgg > 2:142498/1‑140 (MQ=255)
ggCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAAcgg > 1:1227404/1‑140 (MQ=255)
ggCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAAcgg > 1:279401/1‑140 (MQ=255)
gCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAAcggc > 2:1104009/1‑140 (MQ=255)
cgtacgtaACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAAcggcg > 1:1032271/1‑140 (MQ=255)
acgtaACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGa < 1:111316/140‑1 (MQ=255)
acgtaACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGa < 1:403226/140‑1 (MQ=255)
cgtaACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAg > 2:722887/1‑140 (MQ=255)
aCGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGtt < 2:821797/140‑1 (MQ=255)
tgTTATGTTTTGTGGGACATCCGCTGCCCAACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACCCCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGttt < 2:476493/139‑1 (MQ=255)
cGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAggggtt > 2:1234990/1‑135 (MQ=255)
ttATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTa > 1:1286927/1‑140 (MQ=255)
aTGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCgcctttat > 2:423256/1‑133 (MQ=255)
aTGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTACt > 1:193618/1‑140 (MQ=255)
tgtgTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTg > 1:635829/1‑140 (MQ=255)
tgttgtGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTTCTGTc > 1:61407/1‑140 (MQ=255)
tttgtGGGAAACTCGCTGCACCCCCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCt < 2:322456/139‑1 (MQ=255)
gttgtGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCt < 1:596186/140‑1 (MQ=255)
gtggtgGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCt < 2:173829/137‑1 (MQ=255)
tgtgGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTgc < 2:410527/140‑1 (MQ=255)
tgtgGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTgc < 1:142498/140‑1 (MQ=255)
tgtgGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTACTGTCTgc > 1:1084731/1‑140 (MQ=255)
tgtgGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGATCAACGCCACTTTGTTCCGGCAACGGCGGGGGGGGTTTTTTGTCTgc > 2:327022/1‑140 (MQ=255)
tgGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGTCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTTCTGTCTgccc > 1:1431762/1‑139 (MQ=255)
tgGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGGGGTTTTCTGTTTgccg > 1:1465665/1‑140 (MQ=255)
tgGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTTCTGTCTtccc > 1:971795/1‑139 (MQ=255)
tgGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGACAACGGCGGGGGCGGTTTACTGTCTgccc > 1:1035826/1‑139 (MQ=255)
gggAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTgccgc < 2:187621/140‑1 (MQ=255)
gggAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCCGGAGCGTTTTACTGTCTgccgc < 1:870609/140‑1 (MQ=255)
ggAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTTCTGTTTgccccc > 2:1335317/1‑140 (MQ=255)
gAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGCGGTTTTCTTTCTTCCGccc > 2:251742/1‑140 (MQ=255)
aaaCTCGCTGCACCACCGACCCTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCa < 2:888178/140‑1 (MQ=255)
aaaCTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCa < 1:1315410/140‑1 (MQ=255)
aaCTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTACTGTCTTCCGcccca > 2:35291/1‑138 (MQ=255)
cTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGCGGTTTTCTTTCTTCCGCCCcaaa > 1:921453/1‑139 (MQ=255)
cTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGCGGTTTTCTTTCTGCCGCCCaaaa > 2:256193/1‑139 (MQ=255)
cTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTTCTGTCTGCCGCCCcaaa > 1:1169165/1‑139 (MQ=255)
cGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGCGGTTTACTGTCTGCCGCCCcaaaaa > 2:1253540/1‑137 (MQ=255)
cGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAg < 1:164412/140‑1 (MQ=255)
gCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGCGTTTTTCTTTCTGCCGCCCAAAAAGc > 2:738710/1‑140 (MQ=255)
gCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGCGGTTTACTGTCTGCCGCCCCAAAAGCACg > 2:201154/1‑140 (MQ=255)
gCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTATTGTCTGCCGCCCCAAAAACACg > 2:394285/1‑140 (MQ=255)
accaccGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGAt < 1:531158/140‑1 (MQ=255)
acacTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGt < 2:1271067/140‑1 (MQ=255)
cGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCtttt < 1:15338/140‑1 (MQ=255)
cAGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGa < 2:1227404/140‑1 (MQ=255)
ggcgcCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGAc < 2:500779/139‑1 (MQ=255)
aGCGCCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGAc < 1:423256/140‑1 (MQ=255)
gcgcCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTTCTGTCTGCCCCCCAAATAACACGATCGAGCGGCAGCCTTTTAcc > 1:996876/1‑140 (MQ=255)
gcCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTACTGTCTGCCGCCCCAAAAGCACGATCGAGCGGCAGCTTTTTACCGa > 1:1022481/1‑140 (MQ=255)
gcCTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTACTGTCTGCCGCCCCAAAAGCACGATCGAGCGGCAGCTTTTGACCGa > 1:1000218/1‑140 (MQ=255)
ccTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAg < 2:635829/140‑1 (MQ=255)
cTTTCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTTCTGTCTTCCGCCCAAAAAACACGATCGAGCGGCAGCTTTTGTCCCAGc > 2:1429603/1‑140 (MQ=255)
ttCTGGAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCaa < 2:870550/140‑1 (MQ=255)
gAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGc < 1:1144432/140‑1 (MQ=255)
gAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGc < 1:480254/140‑1 (MQ=255)
gAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGc < 1:54662/140‑1 (MQ=255)
gAACAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTACCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGc < 2:1439160/140‑1 (MQ=255)
aaCAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGGGGTTTTCTGTCTGCCGCCCAAAAAACACCAACCAGCGTCCGCTTTTGACCGAGGAACCcgcg > 2:71943/1‑140 (MQ=255)
aCAGGGCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGCgg < 2:505783/140‑1 (MQ=255)
gggCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTTCTGTCTGCCCCCCCAAAAGCACCACCGCGCGGCCGCCTTTTACCCCGCAACCACCGGcca > 2:621362/1‑138 (MQ=255)
gggCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGCGGCTa < 1:273373/140‑1 (MQ=255)
gggCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGCGGCTa < 1:1104009/140‑1 (MQ=255)
ggCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGGGGTTTTCTGTCTGCCGCCCCAAAAACACGAACGAGCGGCAGCCTTTTACCGAGCAACCACCGGCTAt > 2:273373/1‑140 (MQ=255)
ggCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGCGGTTTTCTTTCTGCCGCCCAAATAACACCGTCGAGCGGCAGCTTTTTACCGAGCAACCAGCGGCCAt > 2:733528/1‑140 (MQ=255)
ggCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGCGGTTTTCTGTCTGCCGCCCCAAAAGCACGATCGAGCGCCAGCCTTTTACCCGGCAACCCCCGGCCAt > 2:1001523/1‑140 (MQ=255)
ggCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGCGGCTAt < 2:508538/140‑1 (MQ=255)
ggCCAGCCACTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGCGGCTAt < 1:553690/140‑1 (MQ=255)
ccagccaCTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGGTTTTTTGTTTTCCCCCCCAATAAAACAATCGCGCGTCAGCGTTTTTCCTGGAAAACAGCGGCCAttt > 2:561276/1‑139 (MQ=255)
caCTCGACACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGGGCGGTTTACTGTCTGCCCCCCCAAAAACACGAACGGGCGGCAGCTTTTTACCCAGCAACCAGCGGCCATTTaaaag > 2:1415173/1‑138 (MQ=255)
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CGAAACAATACTCAGGTTATTCCATTGCTGATTTCCCAGTGACAACATAGGCGTACGTAACGTTATGTGTTGTGGGAAACTCGCTGCACCACCGACACTCTCCGCAGCGCCTTTCTGGAACAGGGCCAGCCACTCGGCACCATTCATCGGCGGCATATTGAGTTCAACGCCACTTTGTTCCGGCAACGGCGGGAGCGTTTTACTGTCTGCCGCCCAAATAGCACGATCGAGCGTCAGCTTTTGACCGAGCAACCAGCGGCTATTGAAATG > NC_000913/3393478‑3393747
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
