Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F28 I1 R1
|
116 |
98.7 |
3298914 |
99.2% |
3272522 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
552,819 |
C→T |
Q94Q (CAG→CAA) |
purE ← |
N(5)‑carboxyaminoimidazole ribonucleotide mutase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 552,819 | 0 | C | T | 98.9%
| 324.5
/ ‑4.3
| 94 | Q94Q (CAG→CAA) | purE | N(5)‑carboxyaminoimidazole ribonucleotide mutase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (56/37); total (57/37) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.04e-01 |
TGAGTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTA > NC_000913/552682‑552954
|
tGAGTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTg > 1:491929/1‑140 (MQ=255)
tGAGTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTg > 1:1343758/1‑140 (MQ=255)
tGAGTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTg > 1:735317/1‑140 (MQ=255)
ggTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTa < 2:142342/139‑1 (MQ=255)
aGTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTa > 2:1112179/1‑140 (MQ=255)
aGTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTa > 2:808135/1‑140 (MQ=255)
gTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTAc > 2:1059699/1‑140 (MQ=255)
gTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATACCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTAc > 2:1441204/1‑140 (MQ=255)
cAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGc > 1:734645/1‑140 (MQ=255)
cAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGc > 2:479738/1‑140 (MQ=255)
cAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGc < 2:1181246/140‑1 (MQ=255)
cAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGc < 2:706013/140‑1 (MQ=255)
cAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGc < 1:912859/140‑1 (MQ=255)
cAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGc < 1:1099458/140‑1 (MQ=255)
aGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCAc > 2:130218/1‑140 (MQ=255)
aGTAACGCCGCGTTTGCCGCACCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCAc > 2:1044195/1‑140 (MQ=255)
aaCGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAg < 1:1403776/140‑1 (MQ=255)
ccgcGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGtt < 2:753649/140‑1 (MQ=255)
cgcgTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGGACCGGCGttt > 2:1180358/1‑140 (MQ=255)
cgcgTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGttt > 1:1005629/1‑140 (MQ=255)
cgcgTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGttt > 1:852992/1‑140 (MQ=255)
cgcgTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGttt > 2:1648029/1‑140 (MQ=255)
cgcgTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGttt > 1:1606350/1‑140 (MQ=255)
cgcgTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGttt > 1:903631/1‑140 (MQ=255)
cgTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTg > 2:212167/1‑140 (MQ=255)
tttGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTggc > 2:206912/1‑140 (MQ=255)
ccGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCa > 2:1241952/1‑140 (MQ=255)
cgcgCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCaa < 1:1110024/140‑1 (MQ=255)
gcgcCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAAt < 2:1567608/140‑1 (MQ=255)
gcgcCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAAt < 1:479738/140‑1 (MQ=255)
gcCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCa > 2:667283/1‑140 (MQ=255)
cAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACCGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATg < 1:1267612/140‑1 (MQ=255)
ccAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAg < 1:87125/140‑1 (MQ=255)
aTCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGAtg > 2:1014556/1‑140 (MQ=255)
aTCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGAtg < 2:735317/140‑1 (MQ=255)
tCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGAtgc < 1:125287/140‑1 (MQ=255)
tCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGAtgc < 1:1165091/140‑1 (MQ=255)
cGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAACGTTTTGGCGGCAATCATGCCTGGCAGAtgcg < 1:465225/140‑1 (MQ=255)
gCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGAtgcgctgcg > 1:506100/1‑140 (MQ=255)
aCCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGcgccgc > 2:642219/1‑140 (MQ=255)
cccACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCgccgcc < 1:869134/140‑1 (MQ=255)
ccACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCt > 2:592067/1‑140 (MQ=255)
ccGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTgcg < 1:212167/140‑1 (MQ=255)
ggAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGcc < 2:169260/140‑1 (MQ=255)
ggAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGcc < 1:96340/140‑1 (MQ=255)
ggAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGcc < 2:1462060/140‑1 (MQ=255)
aaTGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCg < 2:903631/140‑1 (MQ=255)
aaTGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCg < 2:852992/140‑1 (MQ=255)
aaTGCCGCGCGGCATTTGAACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCg > 1:337632/1‑140 (MQ=255)
tGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGACAGATGCGCTGCGCCGCCTGCGCCCGCa > 2:1526025/1‑140 (MQ=255)
gCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCaa < 1:1530756/140‑1 (MQ=255)
cgcgGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCaataat > 2:924600/1‑140 (MQ=255)
cgcgGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCaataat < 1:1050921/140‑1 (MQ=255)
cgcgGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCaataat < 1:667283/140‑1 (MQ=255)
cgcgGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCaataat > 1:173860/1‑140 (MQ=255)
cgcgGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCaataat > 1:559167/1‑140 (MQ=255)
cgcgGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCaataat > 1:246499/1‑140 (MQ=255)
cgGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCa < 1:986561/140‑1 (MQ=255)
cgGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCa < 1:354240/140‑1 (MQ=255)
ggCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCAc < 1:1059699/140‑1 (MQ=255)
gCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCAcc < 1:206912/140‑1 (MQ=255)
aTGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGtt < 2:491929/140‑1 (MQ=255)
aTGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGtt > 1:1506882/1‑140 (MQ=255)
aGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTctct > 1:1252898/1‑140 (MQ=255)
aGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTctct > 2:54724/1‑140 (MQ=255)
aGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTctct > 1:1487853/1‑140 (MQ=255)
aGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTctct > 1:1270859/1‑140 (MQ=255)
agGCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGgc > 2:425720/1‑140 (MQ=255)
gCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGgcgc > 2:310738/1‑140 (MQ=255)
gCTATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGgcgc > 2:658640/1‑140 (MQ=255)
gCTATCGACACCGCTCAGTGCGGCGCTTTGTAC‑GGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCt > 1:718632/1‑140 (MQ=255)
tATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCtt > 1:286860/1‑140 (MQ=255)
tATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCtt > 2:867069/1‑140 (MQ=255)
tATCGACACCGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCtt > 2:548144/1‑140 (MQ=255)
tATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCtt > 1:821200/1‑140 (MQ=255)
gACACCGCTCGGTGGGGCGCGTTGTGCTGGCACGCCCAGCACCGGCTCCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCgg < 2:337632/140‑1 (MQ=255)
ccGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGaa > 2:1048923/1‑140 (MQ=255)
ccGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGaa > 1:1076965/1‑140 (MQ=255)
ccGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGaa > 2:939290/1‑140 (MQ=255)
ccGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGaa > 2:1358884/1‑140 (MQ=255)
cGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAg > 1:14537/1‑140 (MQ=255)
cGCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAg < 1:642219/140‑1 (MQ=255)
gCTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGc > 1:1157710/1‑140 (MQ=255)
cTCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCt < 2:735097/140‑1 (MQ=255)
tCAGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTg < 1:924600/140‑1 (MQ=255)
aGTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGaa < 2:998410/140‑1 (MQ=255)
gTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGTGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAAc < 1:1190803/140‑1 (MQ=255)
gTGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAAc < 1:130218/140‑1 (MQ=255)
tGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACa > 1:1388751/1‑140 (MQ=255)
tGCGGCGCTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACa > 2:1548282/1‑140 (MQ=255)
cgcTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTa > 1:1251852/1‑140 (MQ=255)
cgcTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTa > 2:832210/1‑140 (MQ=255)
cgcTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTa > 1:1151858/1‑140 (MQ=255)
cgcTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTa > 1:944964/1‑140 (MQ=255)
cgcTTTGTACTGGCACGCCCAGCACCGGCACCAGCGTTCTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTa > 1:205368/1‑140 (MQ=255)
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TGAGTCGCAAGAATTTGTGCTGCCAGTAACGCCGCGTTTGCCGCGCCAGCTTTACCAATCGCCAGCGTACCCACCGGAATGCCGCGCGGCATTTGTACGATGGAGTAGAGGCTATCGACACCGCTCAGTGCGGCGCTCTGTACTGGCACGCCCAGCACCGGCACCAGCGTTTTGGCGGCAATCATGCCTGGCAGATGCGCTGCGCCGCCTGCGCCCGCAATAATCACCTGATAACCGTTCTCTTCGGCGCTTTCGGCGAAGCTGAACAGTTTA > NC_000913/552682‑552954
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
