Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A2 F28 I1 R1	116	98.7	3298914	99.2%	3272522	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,491,204	T→C	G101G (GGT→GGC)	cybB →	cytochrome b561

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,491,204	0	T	C	98.2%	198.6 / NA	55	G101G (GGT→GGC)	cybB	cytochrome b561
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (27/27); total (27/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GGTCGTTCGTCTTTTGTTAAGGCTGAAATACCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGTTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAATCTGGGATATTTTG  >  NC_000913/1491069‑1491340

ggTCGTTCGTTTTTTGTTAAGGCTAAAATCCCCACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGAttggcttgg                                                                                                                                      <  2:231245/140‑1 (MQ=255)

ggTCGTTCGTCTTTTGTTAAGGCTGAAATCCCCACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGAttggtttgg                                                                                                                                      <  1:1613864/140‑1 (MQ=255)

ggTCGTTCGTCTTTTGTTAAGGCTGAAATCCCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGAttggcttgg                                                                                                                                      <  1:1011770/140‑1 (MQ=255)

ggTCGTTCGTCTTTTGTTAAGGCTGAAATACCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGAttggcttgg                                                                                                                                      >  2:1388341/1‑140 (MQ=255)

   ctttcgtCTTTTGTTAAGGCTGAAATCCCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGtga                                                                                                                                   <  2:99914/138‑1 (MQ=255)

   cgttcgtCTTTTGTTAAGGCTGAAATCCCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGtga                                                                                                                                   <  2:341581/140‑1 (MQ=255)

   cgttcgtCTTTTGTTAAGGCTGAAATACCCACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGtga                                                                                                                                   <  1:56606/140‑1 (MQ=255)

   cgttcgtCTTTTGTAAAGGCTGAAATCCCCACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGtga                                                                                                                                   <  2:463427/140‑1 (MQ=255)

    gttcttCTTTTGTAAGGGCTGAAATCCCCACCGCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGtgat                                                                                                                                  <  1:1129495/140‑1 (MQ=255)

    gttcgtCTTTTGTTAAGGCTGAAATACCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGtgat                                                                                                                                  <  1:110012/140‑1 (MQ=255)

     ttcgtCTTTTGTTAAGGCTGAAATCCCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGtgatg                                                                                                                                 <  1:113420/140‑1 (MQ=255)

       cgtCTTTTGTTAAGGCTAAAATCCCCACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTgatgat                                                                                                                               <  1:217497/140‑1 (MQ=255)

        gtCTTTTGTTAAGGCTGAAATACCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGatgatg                                                                                                                              >  1:1606657/1‑140 (MQ=255)

         tCTTTTGTTAAGGCTGAAATCCCCACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGt                                                                                                                             <  2:1589767/140‑1 (MQ=255)

             ttGTTAAGGCTGAAATACCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATaa                                                                                                                         >  1:204105/1‑140 (MQ=255)

                  aaGGCTAAAAAACCCACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCggg                                                                                                                    <  1:896455/140‑1 (MQ=255)

                   aGGCTGAAATCCCCACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCgggg                                                                                                                   <  1:1544910/140‑1 (MQ=255)

                   aGGCTGAAATCCCCACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCgggg                                                                                                                   <  1:1540283/140‑1 (MQ=255)

                    ggCTGAAATACCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGc                                                                                                                  >  2:126919/1‑140 (MQ=255)

                        gAAATACCCAACCCCACCGATTATACCTAAGCCAAAACCGATGATGACGGGACTTACGCATTTGGGACATTTGGAGATTTATCTCCTGTTTATTGCTCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGCGGCAAcc                                                                                                              >  1:1562321/1‑140 (MQ=255)

                             ccccACCCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTgg                                                                                                         <  2:483/139‑1 (MQ=255)

                               ccAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGtt                                                                                                       >  2:461045/1‑140 (MQ=255)

                               ccAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGtt                                                                                                       >  1:63145/1‑140 (MQ=255)

                               ccAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGtt                                                                                                       >  1:647061/1‑140 (MQ=255)

                                    cccGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCgt                                                                                                  <  2:1638365/140‑1 (MQ=255)

                                      cgccgATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCgttt                                                                                                >  1:1176371/1‑140 (MQ=255)

                                        ccgATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCgtttgg                                                                                              >  2:1418612/1‑140 (MQ=255)

                                                aCCTAAGCCAAAACCGATGATTACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGa                                                                                      >  2:205696/1‑140 (MQ=255)

                                                   tAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGc                                                                                   >  2:1472086/1‑140 (MQ=255)

                                                    aaGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGcc                                                                                  <  2:1415995/140‑1 (MQ=255)

                                                     aGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCt                                                                                 >  1:1634146/1‑140 (MQ=255)

                                                         aaaaCCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACg                                                                             <  1:126172/140‑1 (MQ=255)

                                                          aaaCCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGc                                                                            >  1:1357912/1‑140 (MQ=255)

                                                              cGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCa                                                                        <  1:780829/140‑1 (MQ=255)

                                                                atgatgACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCaga                                                                      >  2:626960/1‑140 (MQ=255)

                                                                atgatgACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCaga                                                                      >  1:1360066/1‑140 (MQ=255)

                                                                 tgatgaCGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCagag                                                                     >  2:599647/1‑140 (MQ=255)

                                                                          gACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTc                                                            >  1:1027421/1‑140 (MQ=255)

                                                                             tGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGaa                                                         >  2:1183714/1‑140 (MQ=255)

                                                                             tGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGaa                                                         <  2:1176371/140‑1 (MQ=255)

                                                                                    tttGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAg                                                  >  1:436406/1‑140 (MQ=255)

                                                                                     ttGGGACATTTGGTGATTTATCTTCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGa                                                 <  2:1633466/140‑1 (MQ=255)

                                                                                     ttGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGa                                                 <  1:740923/140‑1 (MQ=255)

                                                                                     ttGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGa                                                 <  2:92913/140‑1 (MQ=255)

                                                                                       gggACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATa                                               >  2:788396/1‑140 (MQ=255)

                                                                                              ttGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTaaa                                        >  2:791735/1‑140 (MQ=255)

                                                                                              ttGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTaaa                                        >  2:407693/1‑140 (MQ=255)

                                                                                                ggTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGt                                      <  1:126919/140‑1 (MQ=255)

                                                                                                 gTGATTTATCTGCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCATCCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTc                                     <  2:604474/140‑1 (MQ=255)

                                                                                                       tATCTCCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACTCTTCAGAGGCCAATTTCGACCGGGTAGATAGCTTAAAGTCGTGGCa                               <  2:1322160/140‑1 (MQ=255)

                                                                                                           tcCTGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGaa                           >  2:1096614/1‑140 (MQ=255)

                                                                                                              tGTTTATTGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACg                        <  2:53137/140‑1 (MQ=255)

                                                                                                                    ttGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACAATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCg                  <  1:1388341/140‑1 (MQ=255)

                                                                                                                     tGCGCTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGa                 <  2:1634146/140‑1 (MQ=255)

                                                                                                                       cgcTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAAt               >  2:1337889/1‑140 (MQ=255)

                                                                                                                       cgcTGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAAt               >  1:444572/1‑140 (MQ=255)

                                                                                                                          tGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAATCTg            >  1:1432319/1‑140 (MQ=255)

                                                                                                                          tGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAATCTg            >  1:38699/1‑140 (MQ=255)

                                                                                                                          tGCCAGTGATTGGCTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGCAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAATCTg            >  1:1236712/1‑140 (MQ=255)

                                                                                                                                 gATTGGTTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAATCTGGGATAtt     <  1:205696/140‑1 (MQ=255)

                                                                                                                                    tggcttggtGCTGTTGTATAACCGGGGCATCCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAATCTGGGATATTTTg  <  2:1059747/140‑1 (MQ=255)

GGTCGTTCGTCTTTTGTTAAGGCTGAAATACCCAACCCCGCCGATTATACCTAAGCCAAAACCGATGATGACGGGACTGGCGCATTTGGGACATTTGGTGATTTATCTCCTGTTTATTGCGCTGCCAGTGATTGGTTTGGTGATGATGTATAACCGGGGCAACCCGTGGTTTGCGTTTGGTTTGACGATGCCTTACGCTTCAGAGGCCAATTTCGAACGGGTAGATAGCTTAAAGTCGTGGCATGAAACGCTGGCGAATCTGGGATATTTTG  >  NC_000913/1491069‑1491340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A