Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F28 I1 R1
|
116 |
98.7 |
3298914 |
99.2% |
3272522 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,135,135 |
(C)5→6 |
coding (518/2163 nt) |
wzc ← |
protein‑tyrosine kinase Wzc |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,135,130 | 1 | . | C | 98.0%
| 362.4
/ ‑0.2
| 99 | coding (523/2163 nt) | wzc | protein‑tyrosine kinase Wzc |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base C (49/48); total (51/48) |
| Fisher's exact test for biased strand distribution p-value = 4.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 |
Only 100 of 106 total aligned reads displayed.
TTACCGTCAGGCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTC > NC_000913/2134992‑2135264
|
ttACCGTCAGGCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑c > 2:2512/1‑140 (MQ=255)
cGTCAGGCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑ccccc < 2:1171176/140‑1 (MQ=255)
tCAGGCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑ccccccg < 2:1585456/140‑3 (MQ=255)
tCAGGCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑ccccccg < 1:401275/140‑3 (MQ=255)
tCAGGCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑ccccccg < 1:273404/140‑3 (MQ=255)
aGGCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑CCCCCcggg > 2:189329/1‑139 (MQ=255)
aGGCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑CCCCCcggg > 1:702560/1‑139 (MQ=255)
ggCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑ccccccgggc < 1:752770/140‑6 (MQ=255)
ttttGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTaa > 2:1121465/1‑140 (MQ=255)
aGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAgccgc > 1:635432/1‑140 (MQ=255)
ttggttgATCATCCCCAGCGTGGAGCATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGccgccg > 2:344483/1‑140 (MQ=255)
ggttgATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTc > 2:187262/1‑140 (MQ=255)
atcatcCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCgctgc > 2:637354/1‑140 (MQ=255)
tcatcCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCgctgct < 1:1064678/140‑1 (MQ=255)
tcatcCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCgctgct < 2:595806/140‑1 (MQ=255)
tcCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAg > 2:347968/1‑140 (MQ=255)
ccccAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAgg > 2:491278/1‑140 (MQ=255)
cccAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAggg < 2:1026825/140‑1 (MQ=255)
ccAGCGTGGAGTATTTGGTGACGGTAAACTCACTGTCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCC‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAggg > 1:1144378/1‑140 (MQ=255)
ccAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGgt < 2:759120/140‑1 (MQ=255)
gCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTACAGCCGCCGTCGCTGCTCAGGGTGTa > 2:1589977/1‑140 (MQ=255)
gTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGt > 1:1283768/1‑140 (MQ=255)
aGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCCCCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGttt > 2:591441/1‑140 (MQ=255)
gTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTttg < 1:943355/140‑1 (MQ=255)
gTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTttg < 1:1463996/140‑1 (MQ=255)
gTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTttg < 1:365873/140‑1 (MQ=255)
tttGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTttgttg > 2:849522/1‑140 (MQ=255)
ttGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTtgttgt > 2:56955/1‑140 (MQ=255)
ttGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGGGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTtgttgttgt > 1:1600656/1‑140 (MQ=255)
ggTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTcc < 1:508326/140‑1 (MQ=255)
tGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAg > 2:78016/1‑140 (MQ=255)
gACGGTAAACTCACTGTCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGc > 1:398365/1‑140 (MQ=255)
gACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGc > 2:1636611/1‑140 (MQ=255)
cGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGcac > 2:646180/1‑140 (MQ=255)
cGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGcac > 2:330488/1‑140 (MQ=255)
cGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGcac > 1:1148656/1‑140 (MQ=255)
cGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGcac > 2:1250067/1‑140 (MQ=255)
cGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGAGTAGTTTTTGTTGTCCAGcac > 1:793685/1‑140 (MQ=255)
ggTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGcaca < 2:702560/140‑1 (MQ=255)
gTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACAt < 2:89746/140‑1 (MQ=255)
gTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACAt < 1:410099/140‑1 (MQ=255)
gTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACAt > 2:665390/1‑140 (MQ=255)
tAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACAtt < 2:147766/140‑1 (MQ=255)
tAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACAtt > 1:309288/1‑140 (MQ=255)
tAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACAtt > 2:324653/1‑140 (MQ=255)
tAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACAtt > 1:837876/1‑140 (MQ=255)
tAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACAtt > 1:851149/1‑140 (MQ=255)
aaaCTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTa < 1:1313957/140‑1 (MQ=255)
cTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTaa < 2:1406320/140‑1 (MQ=255)
tGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTaaa > 1:1047020/1‑140 (MQ=255)
ccGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAacac < 1:683077/140‑1 (MQ=255)
ggCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTg > 2:923934/1‑140 (MQ=255)
ggCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTg > 1:231233/1‑140 (MQ=255)
ggCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAATTTTTGTTGTCCAGCACATTAAGCGTAAACACCTg < 2:1162043/140‑1 (MQ=255)
ggCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCATCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTg > 2:1009200/1‑140 (MQ=255)
gCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAACACATTAAGCGTAAACACCTGa < 2:856656/140‑1 (MQ=255)
cGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGc > 2:232270/1‑140 (MQ=255)
cGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGc > 1:62523/1‑140 (MQ=255)
cGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGc > 1:96206/1‑140 (MQ=255)
tGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCa < 2:309288/140‑1 (MQ=255)
tGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCa < 1:1046463/140‑1 (MQ=255)
tGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCa < 1:187262/140‑1 (MQ=255)
aaTGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCAtc > 2:128423/1‑140 (MQ=255)
ggCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATctct > 2:1593485/1‑140 (MQ=255)
tCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCg < 1:1250067/140‑1 (MQ=255)
cAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg < 1:1636611/140‑1 (MQ=255)
cAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg < 2:1252960/140‑1 (MQ=255)
cAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg < 1:637354/140‑1 (MQ=255)
cAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg < 1:189329/140‑1 (MQ=255)
cAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg < 1:1403800/140‑1 (MQ=255)
cAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg < 1:1121465/140‑1 (MQ=255)
cAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg < 1:347968/140‑1 (MQ=255)
cAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCgg < 1:344483/140‑1 (MQ=255)
cAACCACCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGTTCCGCCATCTCTTTCgg < 2:1201850/140‑1 (MQ=255)
aaCCATCAGCGTGCCGCCTTCTTTTTTCAGCAACTGGCCCGCCTGC‑‑CCCCCGGGCGCTAAAGCCGCCGGCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACTCCTGATCCGCCATCTCTTTCggg < 2:1343232/140‑1 (MQ=255)
aaCCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCggg < 1:330488/140‑1 (MQ=255)
aCCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGGTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGc > 1:1351878/1‑140 (MQ=255)
cAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCCGGGAGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTa > 2:306387/1‑140 (MQ=255)
aGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTaa > 2:1619749/1‑140 (MQ=255)
gTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGCC‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAg < 2:1144378/140‑1 (MQ=255)
tGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAggg > 2:655683/1‑139 (MQ=255)
aCGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAggtgg > 1:1365687/1‑140 (MQ=255)
cGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAggtggt < 1:1132925/140‑1 (MQ=255)
cGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAggtggt > 1:1242332/1‑140 (MQ=255)
cGCCTTCTTTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAggtggt < 1:56955/140‑1 (MQ=255)
tcttTTTTCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACtt > 2:123569/1‑140 (MQ=255)
tCAGCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGt < 1:2512/140‑1 (MQ=255)
cAGCATCTGGCCCGCTTGCCCCCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCATATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCg < 1:591441/140‑1 (MQ=255)
gCATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGtctc > 2:1320200/1‑140 (MQ=255)
cATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCg > 1:748499/1‑140 (MQ=255)
cATCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCg < 1:821707/140‑1 (MQ=255)
aTCTGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGt > 1:1243708/1‑140 (MQ=255)
tGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCt < 1:1480760/140‑1 (MQ=255)
tGGCCCGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCt < 1:232270/140‑1 (MQ=255)
cccGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGAc < 1:128423/140‑1 (MQ=255)
cccGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGAc < 1:665390/140‑1 (MQ=255)
cccGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGAc < 1:849522/140‑1 (MQ=255)
cGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGt < 1:491278/140‑1 (MQ=255)
cGCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGt < 1:876500/140‑1 (MQ=255)
gCTTGC‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTc > 2:43478/1‑140 (MQ=255)
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TTACCGTCAGGCTGTTTTGCAGTTGGTTGATCATCCCCAGCGTGGAGTATTTGGTGACGGTAAACTCACTGCCCGGGCTGGCGTGAATGGCTTCAACCATCAGCGTGACGCCTTCTTTTTTCAGCATCTGGCCCGCTTG‑‑‑CCCCCGGGCGCTAAAGCCGCCGTCGCTGCTCAGGGTGTAGTTTTTGTTGTCCAGCACATTAAGCGTAAACACCTGATCCGCCATCTCTTTCGGGCGGTTAAAGGTGGTCACTTTCACCGTCTCGTTCTGACGTC > NC_000913/2134992‑2135264
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
