Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F28 I1 R1
|
116 |
98.7 |
3298914 |
99.2% |
3272522 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,090,827 |
G→A |
A161T (GCT→ACT) |
endA → |
DNA‑specific endonuclease I |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,090,827 | 0 | G | A | 99.2%
| 445.6
/ ‑5.2
| 132 | A161T (GCT→ACT) | endA | DNA‑specific endonuclease I |
| Reads supporting (aligned to +/- strand): ref base G (1/0); new base A (59/72); total (60/72) |
| Fisher's exact test for biased strand distribution p-value = 4.55e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
Only 100 of 135 total aligned reads displayed.
TGGAAAGCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAGCTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTACC > NC_000913/3090690‑3090961
|
tGGAAAGCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGGCGATTTCAAAGAAAAAACt > 2:1438522/1‑140 (MQ=255)
gAAAGCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGc < 2:625620/140‑1 (MQ=255)
gAAAGCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGc > 2:1500748/1‑140 (MQ=255)
gCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGaa < 1:495802/140‑1 (MQ=255)
atatGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCCTGGAGGTCGATTTCAAAGAAAAAACTGCCGAaccc > 2:1064695/1‑139 (MQ=255)
tGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGGGGAATGGCGGGGGAGGCCAGAACGGGCAACGCGCCATGAAGGTCGATTTCAAAAAAAAAACCGCCGAaccaccc > 2:19388/1‑139 (MQ=255)
aTAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAgcg < 1:564422/140‑1 (MQ=255)
ccTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTg < 2:596204/140‑1 (MQ=255)
ccTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTg < 1:1425740/140‑1 (MQ=255)
cTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGc > 2:1327699/1‑140 (MQ=255)
gCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAc > 1:116294/1‑140 (MQ=255)
gCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGGCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAc > 1:1047111/1‑140 (MQ=255)
gCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGGCAATGCACCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAc > 2:247286/1‑140 (MQ=255)
gCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGCGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAc > 1:376477/1‑140 (MQ=255)
cAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCCATACGGCCAATGCGCCATGAAGGGCGATTTCAAAGAAAAAACTGCCGGACCACCAGCGCGGGCAcg > 2:1345795/1‑140 (MQ=255)
cAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAcg < 2:110599/140‑1 (MQ=255)
cAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAcg > 1:733564/1‑140 (MQ=255)
cAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAcg < 2:1393124/140‑1 (MQ=255)
cAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAcg < 1:1311562/140‑1 (MQ=255)
cAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAcg < 1:1214770/140‑1 (MQ=255)
cAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAcg < 1:1647818/140‑1 (MQ=255)
cAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGGCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAcg > 1:1622677/1‑140 (MQ=255)
cAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGGACGGTCAATGCGCCATGAAGGGCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAcc > 2:1168261/1‑139 (MQ=255)
gCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCAcgcg < 1:945306/140‑1 (MQ=255)
ccGTCAGTCAGTGGGGTGAATGGCGATCGCGGCAACTTTATGTCCAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCgg < 2:358243/140‑1 (MQ=255)
gTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTg < 1:1461415/140‑1 (MQ=255)
gTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGGCAAAGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTg > 2:759614/1‑140 (MQ=255)
gtgaggtgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTgcg < 1:1438522/140‑1 (MQ=255)
gtgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCAc < 2:60979/140‑1 (MQ=255)
gtgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCAc < 2:249788/140‑1 (MQ=255)
gtgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCAc < 2:328886/140‑1 (MQ=255)
gtgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCAc < 2:439917/140‑1 (MQ=255)
gtgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCAc < 2:5294/140‑1 (MQ=255)
gtgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCAc < 1:781804/140‑1 (MQ=255)
gtgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCAc < 1:597691/140‑1 (MQ=255)
tgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGGCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCAcc < 2:226727/140‑1 (MQ=255)
tgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCAcc < 1:681822/140‑1 (MQ=255)
tgaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGGCAATGCGCCATGAAGGGCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGGGCCATTGCGCGCAcc > 2:847033/1‑140 (MQ=255)
gaATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCt > 1:883759/1‑140 (MQ=255)
aaTGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTa < 1:569011/140‑1 (MQ=255)
ggCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACtt > 1:1365466/1‑140 (MQ=255)
gATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCta < 1:1064695/140‑1 (MQ=255)
aTCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCCGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCtat > 2:1461217/1‑140 (MQ=255)
cgGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATgc < 2:1247107/140‑1 (MQ=255)
gCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATgcgc < 2:320694/140‑1 (MQ=255)
gCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATgcgc > 2:82076/1‑140 (MQ=255)
cAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGcgcg < 1:1423481/140‑1 (MQ=255)
aCTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGAc < 2:1056400/140‑1 (MQ=255)
cTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGAcc > 1:536875/1‑140 (MQ=255)
aTGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATa < 2:574963/140‑1 (MQ=255)
aTGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATa < 2:556564/140‑1 (MQ=255)
aTGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATa < 2:553336/140‑1 (MQ=255)
aGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCt > 2:1570847/1‑140 (MQ=255)
aGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCt > 1:134537/1‑140 (MQ=255)
aGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCt > 1:793023/1‑140 (MQ=255)
aGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGGGCCATTGCGCGCACCCACTTCTATATGCGCGACCAATACAACCt > 1:405303/1‑140 (MQ=255)
aGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGGGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCt > 2:680818/1‑140 (MQ=255)
aGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGGCGATTTCAAAGAAAAAACTGCCGGACCACCAGCGCGTGCACGCGGTGCCCTTCCGCGCACCCACTTCTATATGCGCGGCCAATACAACCt > 2:1562499/1‑140 (MQ=255)
gCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTg > 2:863140/1‑140 (MQ=255)
gCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTg > 1:1479815/1‑140 (MQ=255)
gCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTg > 1:935709/1‑140 (MQ=255)
ccAGTGGAATGGCGGCGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGCACCACCAGCGCGAGCACGCGGGGCCAATGCGCCCACCTACTTCTATATGCGCGACCAATACAACCTGa > 2:790831/1‑140 (MQ=255)
gTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGacac > 2:1197323/1‑140 (MQ=255)
gTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGacac > 2:791007/1‑140 (MQ=255)
aTGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACActctct < 1:1333636/140‑1 (MQ=255)
ggCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCg < 1:1614849/140‑1 (MQ=255)
ggCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGGGCCCTTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACtctctcc > 2:1573924/1‑139 (MQ=255)
ggCGGTGAAGGCCAGTACGGGCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGGGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACtccctcc > 2:1076808/1‑139 (MQ=255)
cAGTACGGTCAATGCGCCATGAAGGACGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCa > 1:856821/1‑140 (MQ=255)
aGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAg < 1:1575360/140‑1 (MQ=255)
aGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAg < 1:988908/140‑1 (MQ=255)
aGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAg < 1:101381/140‑1 (MQ=255)
tCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCa > 2:104459/1‑140 (MQ=255)
cAATGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCaa < 1:306381/140‑1 (MQ=255)
aaTGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAAc > 1:1479482/1‑140 (MQ=255)
aaTGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTACAAc > 1:470559/1‑140 (MQ=255)
tGCGCCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGc < 1:1570847/140‑1 (MQ=255)
gcgcCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCCCCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACTCTCTCTCGCCAGCAAACGCAGCTGTTCAACGCa < 1:1345795/140‑1 (MQ=255)
gcgcCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCa < 1:759614/140‑1 (MQ=255)
cgcCATGAAGTTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGTGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCAt < 2:1445307/140‑1 (MQ=255)
cgcCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCAt < 1:284984/140‑1 (MQ=255)
gcCATGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATg > 1:951717/1‑140 (MQ=255)
gtGAAGGTCGATTTCAAAGAAAAAACTGCCGACCCACCAGCGCGTGCACGCGGTGCCATTGCGCGCGCCTCCTTCTATAAGCGCGACCAATGCAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGaa < 2:376477/139‑1 (MQ=255)
aTGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCTCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGaa < 2:928986/140‑1 (MQ=255)
tGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAAc < 2:13717/140‑1 (MQ=255)
tGAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAAc < 2:134537/140‑1 (MQ=255)
gAAGGTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACa > 1:303380/1‑140 (MQ=255)
ggTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGa < 1:1342521/140‑1 (MQ=255)
gTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGAt > 2:711500/1‑140 (MQ=255)
gTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGAt > 2:1063810/1‑140 (MQ=255)
gTCGATTTCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGAt > 2:212968/1‑140 (MQ=255)
tttCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATc < 2:1047332/140‑1 (MQ=255)
tttCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATc > 1:87153/1‑140 (MQ=255)
tttCAAAGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATc > 1:414263/1‑140 (MQ=255)
aaaGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGt < 2:116294/140‑1 (MQ=255)
aaGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGtt > 2:1252396/1‑140 (MQ=255)
aGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTa < 2:470559/140‑1 (MQ=255)
aGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTa < 2:1107145/140‑1 (MQ=255)
aGAAAAAACTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTa < 2:951717/140‑1 (MQ=255)
aaaaaaCTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTAcc < 1:1327699/140‑1 (MQ=255)
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TGGAAAGCGATATGCATAACCTGCAGCCGTCAGTCGGTGAGGTGAATGGCGATCGCGGCAACTTTATGTACAGCCAGTGGAATGGCGGTGAAGGCCAGTACGGTCAATGCGCCATGAAGGTCGATTTCAAAGAAAAAGCTGCCGAACCACCAGCGCGTGCACGCGGTGCCATTGCGCGCACCTACTTCTATATGCGCGACCAATACAACCTGACACTCTCTCGCCAGCAAACGCAGCTGTTCAACGCATGGAACAAGATGTATCCGGTTACC > NC_000913/3090690‑3090961
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
