Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A9 F28 I1 R1
|
120 |
56.0 |
1898522 |
99.4% |
1887130 |
138.5 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,022,692 |
A→G |
S398P (TCG→CCG) |
yccS ← |
putative transporter YccS |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,022,692 | 0 | A | G | 100.0%
| 264.3
/ NA
| 73 | S398P (TCG→CCG) | yccS | putative transporter YccS |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (38/35); total (38/35) |
ATCCTTAACTTCAGGCGGTGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGACATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTAGTGCC > NC_000913/1022559‑1022822
|
atCCTTAACTTCAGGCGGTGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCa > 1:660130/1‑136 (MQ=255)
ccTTAACTTCAGGCGGTGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTa > 1:644579/1‑140 (MQ=255)
tAACTTCAGGCGGTGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCg > 2:505049/1‑140 (MQ=255)
tAACTTCAGGCGGTGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCg > 2:218479/1‑140 (MQ=255)
cAGGCGGTGGCGCGTGGCGTTATAGTTTGGCTGGCAGATAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTCACCGCATGAc > 2:67117/1‑140 (MQ=255)
cAGGCGGTGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGAc > 1:847798/1‑140 (MQ=255)
aGGCGGTGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCAGAAGCACAACACCAGCGGCATTCTTACCGCATGACg > 2:886520/1‑140 (MQ=255)
ggTGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGTTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAag < 2:847798/140‑1 (MQ=255)
tGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAagag > 2:907223/1‑140 (MQ=255)
ggCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAgg > 1:199674/1‑140 (MQ=255)
cgTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCgg > 2:630812/1‑140 (MQ=255)
gTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGa > 1:809488/1‑140 (MQ=255)
ggCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGAtt < 2:439087/140‑1 (MQ=255)
ggCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGAtt > 2:776020/1‑140 (MQ=255)
tagctggcAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGt < 2:644579/138‑1 (MQ=255)
ggctggcAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTg < 2:199674/140‑1 (MQ=255)
ggctggcAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTg < 1:630812/140‑1 (MQ=255)
ctggcAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGAc > 1:395071/1‑140 (MQ=255)
cAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCt > 1:52136/1‑140 (MQ=255)
aaacaaacTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGAc > 2:640573/1‑140 (MQ=255)
acaaacTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGc < 1:218479/140‑1 (MQ=255)
acaaacTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGc < 1:218137/140‑1 (MQ=255)
aaacTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAg < 2:741746/140‑1 (MQ=255)
aaacTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAg < 2:903186/140‑1 (MQ=255)
acTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGcc < 2:809488/140‑1 (MQ=255)
acTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGcc < 1:776020/140‑1 (MQ=255)
acTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTCACCGCATGACGGAAGAGGGCGGATTCGGGCGTGAAGTGACGGCTAAGACGCAGcc < 1:67117/140‑1 (MQ=255)
gTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGat < 1:907223/140‑1 (MQ=255)
gTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGat > 1:160677/1‑140 (MQ=255)
gATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACg < 1:759734/123‑1 (MQ=255)
gATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACg > 2:759734/1‑123 (MQ=255)
tCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAAc > 1:27957/1‑140 (MQ=255)
tCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAAc > 2:696291/1‑140 (MQ=255)
aTACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGt < 2:160677/140‑1 (MQ=255)
tACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAAcc < 2:761858/136‑1 (MQ=255)
tACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAAcc > 1:761858/1‑136 (MQ=255)
ccGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCTTGACGGAAGAGGGCGGTTTCCGGCGGGAAGTGACGGCAAAGACGCAGCAGGTTTTCACTCAACCCTTCCgg > 2:111055/1‑140 (MQ=255)
gTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGc > 2:448191/1‑140 (MQ=255)
aTTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGtcatc > 2:73616/1‑140 (MQ=255)
gTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAg > 1:475375/1‑140 (MQ=255)
aTCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTc > 1:6180/1‑140 (MQ=255)
cTGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCAt > 1:896027/1‑140 (MQ=255)
tGAATGATGGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCAtt < 2:475375/140‑1 (MQ=255)
tgatgGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCg < 2:52136/140‑1 (MQ=255)
tgatgGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCg > 1:827235/1‑140 (MQ=255)
gatgGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCATCCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGt < 1:640573/140‑1 (MQ=255)
gatgGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGt < 2:395071/140‑1 (MQ=255)
tgGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCa > 2:352625/1‑140 (MQ=255)
tgGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCa > 2:80468/1‑140 (MQ=255)
tgGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCa > 2:452387/1‑140 (MQ=255)
tgGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCa < 1:649612/140‑1 (MQ=255)
tgGCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCCGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCa > 2:905567/1‑140 (MQ=255)
tgGCGTAGCAGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCa < 1:886520/140‑1 (MQ=255)
ggCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCat < 1:505049/140‑1 (MQ=255)
ggCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCat > 1:113387/1‑140 (MQ=255)
ggCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCat > 1:491278/1‑140 (MQ=255)
ggCGTAGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCat < 2:27957/140‑1 (MQ=255)
aGCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCAttatta < 1:73616/140‑1 (MQ=255)
gCCGAAGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATtattat > 1:338161/1‑140 (MQ=255)
aGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGt > 2:142534/1‑140 (MQ=255)
aGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGt < 2:896027/140‑1 (MQ=255)
aGCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGt < 1:448191/140‑1 (MQ=255)
gCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTa < 2:6180/140‑1 (MQ=255)
gCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTa < 1:80468/140‑1 (MQ=255)
gCACAACACCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCCGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTa < 1:905567/140‑1 (MQ=255)
aacaCCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCattatt < 2:455643/128‑1 (MQ=255)
aacaCCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCattatt > 1:455643/1‑128 (MQ=255)
acacCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCACCCCGTGCGGGCTGTCATCAGCGGGCTCATTTTCGTCATTATTATGGGGTAGTGcc < 2:113387/140‑1 (MQ=255)
acacCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTAGTGcc < 1:452387/140‑1 (MQ=255)
acacCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTAGTGcc < 1:352625/140‑1 (MQ=255)
acacCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTAGTGcc > 1:67220/1‑140 (MQ=255)
acCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTAGTGcc > 2:263844/1‑138 (MQ=255)
acCAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTAGTGcc < 1:263844/138‑1 (MQ=255)
ccAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTAGTGcc < 2:80218/137‑1 (MQ=255)
ccAGCGGCATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTAGTGcc > 1:80218/1‑137 (MQ=255)
|
ATCCTTAACTTCAGGCGGTGGCGCGTGGCGTTATAGTTTGGCTGGCAGACAAACAAACTTGTCAGCAAGATCCAATACCCGTGATGCATTCCGGTTATCTGAATGATGGCGTAGCCGAAGCACAACACCAGCGACATTCTTACCGCATGACGGAAGAGGGCGGATTCCGGCGTGAAGTGACGGCTAAGACGCAGCCAGATATCACTCAACCCGTGCGGGCTGTCATCAGCGAGCTCATTTTCGTCATTATTATGGGGTAGTGCC > NC_000913/1022559‑1022822
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
