Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
106 |
90.3 |
3060316 |
99.2% |
3035833 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,845,334 |
(T)6→5 |
coding (1627/1962 nt) |
topB ← |
DNA topoisomerase III |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,845,329 | 0 | T | . | 100.0%
| 312.0
/ NA
| 71 | coding (1632/1962 nt) | topB | DNA topoisomerase III |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (32/39); total (32/39) |
TCCTGATAGCGACACTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATC > NC_000913/1845192‑1845464
|
tCCTGATAGCGACACTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCttt < 1:197936/140‑1 (MQ=255)
tGATAGCGACACTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCTCCCtttttg > 1:136590/1‑139 (MQ=255)
tGATAGCGACACTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCtttttg < 1:36685/140‑2 (MQ=255)
cGACACTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAgg > 2:197291/1‑140 (MQ=255)
acTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAAc > 2:191769/1‑140 (MQ=255)
acTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAAc < 1:626923/140‑1 (MQ=255)
acTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAAc > 2:484204/1‑140 (MQ=255)
acTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAAc > 2:1415193/1‑140 (MQ=255)
tGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCa < 1:371506/140‑1 (MQ=255)
gCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCAc < 1:1378889/140‑1 (MQ=255)
gCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCAc < 2:250852/140‑1 (MQ=255)
cTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACg > 2:146365/1‑140 (MQ=255)
cTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACg > 2:1167609/1‑140 (MQ=255)
gATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGaacaa < 1:1213891/140‑1 (MQ=255)
cAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCaat < 2:117417/140‑1 (MQ=255)
gCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCaataa > 2:1215344/1‑140 (MQ=255)
gCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCaataa > 1:509579/1‑140 (MQ=255)
cACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCaataat > 1:1157077/1‑140 (MQ=255)
aTTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCgg > 2:844224/1‑140 (MQ=255)
aTTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCgg > 2:1514137/1‑140 (MQ=255)
tCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCa < 1:309555/140‑1 (MQ=255)
ccAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCAcg < 2:149442/140‑1 (MQ=255)
gTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGt < 1:773282/140‑1 (MQ=255)
cgcgGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGGGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGGTCAATAATCCCGGCACGCGTTGc > 2:638350/1‑140 (MQ=255)
cgGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCct < 1:1185269/140‑1 (MQ=255)
cgGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCATTGCct < 2:1091539/140‑1 (MQ=255)
gTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCctct < 2:1098999/140‑1 (MQ=255)
gTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGCCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCAGCACGCGTTGTctct < 2:849260/140‑1 (MQ=255)
gTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTccc < 2:238355/140‑1 (MQ=255)
tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGAcc > 1:430343/1‑140 (MQ=255)
tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGAcc > 1:1418853/1‑140 (MQ=255)
tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGAcc > 2:757593/1‑140 (MQ=255)
tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGAcc > 1:1201975/1‑140 (MQ=255)
tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGAcc > 2:221178/1‑140 (MQ=255)
tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGAcc > 1:69622/1‑140 (MQ=255)
tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGAcc > 1:681614/1‑140 (MQ=255)
tcgcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGAcc > 2:243327/1‑140 (MQ=255)
gcgtcgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCAt < 1:302963/140‑1 (MQ=255)
cgcCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGt < 2:264737/140‑1 (MQ=255)
cATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGc < 2:992388/140‑1 (MQ=255)
aGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATc < 2:1190204/140‑1 (MQ=255)
cGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCtt > 2:1303268/1‑140 (MQ=255)
ggAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCa < 1:1215344/140‑1 (MQ=255)
ggAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCa < 1:1260798/140‑1 (MQ=255)
ggAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCa < 1:475036/140‑1 (MQ=255)
ggAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCa < 1:197291/140‑1 (MQ=255)
ggAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCa < 1:757593/140‑1 (MQ=255)
ggAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCa < 1:819845/140‑1 (MQ=255)
ggAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCa < 2:1201975/140‑1 (MQ=255)
ggAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGGCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCa < 1:1415193/140‑1 (MQ=255)
aGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCt < 1:844224/140‑1 (MQ=255)
aGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCt < 1:191769/140‑1 (MQ=255)
aGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCt > 1:1236217/1‑140 (MQ=255)
aGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCt < 1:1282468/140‑1 (MQ=255)
cgcTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCttt > 2:742653/1‑140 (MQ=255)
cTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTAt < 1:1014992/140‑1 (MQ=255)
ttCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCt > 2:1475882/1‑140 (MQ=255)
ttCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCt > 2:17003/1‑140 (MQ=255)
ttCCGGCGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCt > 1:184419/1‑140 (MQ=255)
cGTCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACaa < 2:465861/140‑1 (MQ=255)
tCGGTGGAGTGGATATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAg < 2:1137870/140‑1 (MQ=255)
tggagtggaTATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAgcgcg < 2:263569/140‑1 (MQ=255)
tggagtggaTATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAgcgcg < 1:1064943/140‑1 (MQ=255)
tggagtggaTATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAgcgcg < 2:1418853/140‑1 (MQ=255)
tggagtggaTATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAgcgcg < 1:8844/140‑1 (MQ=255)
tggagtggaTATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAgcgcg < 1:774281/140‑1 (MQ=255)
ggagtggaTATAGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAgcgcgc < 1:146365/140‑1 (MQ=255)
tataGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCgg > 2:1059084/1‑140 (MQ=255)
ataGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGt > 2:1519418/1‑140 (MQ=255)
aGCGCCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCa < 2:1336641/140‑1 (MQ=255)
gcgcCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGACCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCAt > 1:533258/1‑140 (MQ=255)
cgcCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCTTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATc > 2:880349/1‑140 (MQ=255)
cgcCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGTTCATc > 2:1040419/1‑140 (MQ=255)
cgcCC‑TTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATc > 1:829393/1‑140 (MQ=255)
|
TCCTGATAGCGACACTGCTTTTCGCTGATTTGCGTCAGCACCGATTCCCAGTGCGCGGTCATGTCCGGTCGCGTCGCCATCTCCGGCAGCGAATGGAATAGCGCTTTTCCGGCGTCGGTGGAGTGGATATAGCGCCCTTTTTTGGTCAGGAAACCACGCTTGAACAACAGTTCAATAATCCCGGCACGCGTTGCCTCTGTCCCCAGACCATCGGTCGCACGGAGGATCTTTTTCAGATCTTTATCCTGCACAAAGCGCGCGATCCCGGTCATC > NC_000913/1845192‑1845464
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
