Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F28 I1 R1
|
106 |
90.3 |
3060316 |
99.2% |
3035833 |
139.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,651,060 |
G→A |
R410C (CGT→TGT) |
yfhM ← |
alpha2‑macroglobulin |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,651,060 | 0 | G | A | 100.0%
| 269.4
/ NA
| 78 | R410C (CGT→TGT) | yfhM | alpha2‑macroglobulin |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (39/39); total (39/39) |
ATTGCTATCGAGTGGCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACGCAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCAGCGCCGGAAGTTTTAAA > NC_000913/2650923‑2651193
|
aTTGCTATCGAGTGGCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATcacaca > 2:905585/1‑140 (MQ=255)
gCTATCGAGTGGCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACacagca < 1:1314594/140‑1 (MQ=255)
tATCGAGTGGCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGATTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCaaa < 2:328528/140‑1 (MQ=255)
tCGAGTGGCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAAcc > 1:932132/1‑140 (MQ=255)
gAGTGGCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCAACACACAGCAAACCAt < 2:468497/140‑1 (MQ=255)
aGTGGCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGGTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCAtt > 2:1453366/1‑140 (MQ=255)
tGGCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGa > 2:314246/1‑140 (MQ=255)
ggCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACTCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAg < 1:415899/140‑1 (MQ=255)
ggCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAg < 1:1281014/140‑1 (MQ=255)
gCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAgg > 1:752763/1‑140 (MQ=255)
gCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAgg > 1:215260/1‑140 (MQ=255)
gCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAgg < 1:905585/140‑1 (MQ=255)
aGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGAtt < 1:269598/140‑1 (MQ=255)
aGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGAtt < 1:77580/140‑1 (MQ=255)
aaGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGt < 1:1293781/140‑1 (MQ=255)
aaGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGt < 1:273899/140‑1 (MQ=255)
aaGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGt < 2:613409/140‑1 (MQ=255)
tAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCAcc > 2:539528/1‑140 (MQ=255)
tAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCAcc > 1:1174199/1‑140 (MQ=255)
tAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCAcc > 1:378902/1‑140 (MQ=255)
tAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCAcc > 2:700318/1‑140 (MQ=255)
tAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCAcc > 2:27495/1‑140 (MQ=255)
agagGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCt > 2:1170334/1‑140 (MQ=255)
agagGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCt < 1:1356150/140‑1 (MQ=255)
agGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTgg < 1:239100/140‑1 (MQ=255)
agGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTgg < 2:150332/140‑1 (MQ=255)
agGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTgg < 1:1132703/140‑1 (MQ=255)
gCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGc < 2:646372/140‑1 (MQ=255)
cATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGa > 1:5993/1‑140 (MQ=255)
ttCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATa > 2:127489/1‑140 (MQ=255)
ttCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATa < 1:346871/140‑1 (MQ=255)
cGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGAt > 1:167883/1‑140 (MQ=255)
cTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTGCCGTTTCACCTGGGCGATAAAGATcgc < 2:1284709/140‑1 (MQ=255)
cTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTAACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATcgc > 2:1195186/1‑140 (MQ=255)
tGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATcgcg < 1:996781/140‑1 (MQ=255)
tGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATcgcg < 1:599321/140‑1 (MQ=255)
tGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATcgcg < 1:748255/140‑1 (MQ=255)
tAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGTGCGATAAAGATCGCGTggg > 1:1156155/1‑140 (MQ=255)
aaCGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGc < 2:378136/140‑1 (MQ=255)
gacgCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCaa < 2:174008/140‑1 (MQ=255)
cTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACAt > 2:1057135/1‑140 (MQ=255)
aGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGaaaaa < 1:1057135/140‑1 (MQ=255)
aCCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTg > 1:440542/1‑140 (MQ=255)
aCCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTg < 1:1083333/140‑1 (MQ=255)
ccTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGt < 1:166247/140‑1 (MQ=255)
ccTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGt < 2:1235975/140‑1 (MQ=255)
ccTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGt < 2:932132/140‑1 (MQ=255)
cTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGtt < 2:1529461/140‑1 (MQ=255)
cTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGtt > 2:99101/1‑140 (MQ=255)
cTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGtt > 2:374315/1‑140 (MQ=255)
cTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGtt < 1:241187/140‑1 (MQ=255)
cTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGtt > 1:1053837/1‑140 (MQ=255)
gCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGtt < 2:440396/138‑1 (MQ=255)
gCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGtt > 1:440396/1‑138 (MQ=255)
gCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTg > 1:972030/1‑140 (MQ=255)
gCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTg > 1:1056522/1‑140 (MQ=255)
gCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTg > 2:1313903/1‑140 (MQ=255)
ccATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCt < 1:19113/140‑1 (MQ=255)
tCGGGTTTAATCACGTCTAACTTGATGGGTTGATTTGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCtata > 2:880967/1‑140 (MQ=255)
tCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCtata > 1:1225999/1‑140 (MQ=255)
ttAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTgg > 2:345179/1‑140 (MQ=255)
aTCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGgcgc > 2:279890/1‑140 (MQ=255)
gTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAg < 1:786943/140‑1 (MQ=255)
gTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAg > 1:1404728/1‑140 (MQ=255)
tCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGc > 1:211709/1‑140 (MQ=255)
aTGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTaaa > 1:1087299/1‑140 (MQ=255)
aTGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTaaa > 2:316368/1‑140 (MQ=255)
aTGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTaaa > 2:115001/1‑140 (MQ=255)
ttGATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTg > 1:1409414/1‑140 (MQ=255)
gATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCt < 1:127489/140‑1 (MQ=255)
gATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCt < 1:220482/140‑1 (MQ=255)
gATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCt < 2:628227/140‑1 (MQ=255)
gATTGGGCAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCt < 1:700318/140‑1 (MQ=255)
cAACGCTTTACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCa > 2:1428783/1‑140 (MQ=255)
ttACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCAGCGCCgg < 2:167883/140‑1 (MQ=255)
tACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCAGCGCCGGa > 1:1351032/1‑140 (MQ=255)
tACCGTCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCAGCGCCGGa > 1:1039938/1‑140 (MQ=255)
tCTGCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCAGCGCCGGAAGttt > 1:1005680/1‑140 (MQ=255)
gCATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCAGCGCCGGAAGTTTTaa > 1:918075/1‑140 (MQ=255)
cATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCAGCGCCGGAAGTTTTaaa < 2:5993/140‑1 (MQ=255)
cATCACACAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCAGCGCCGGAAGTTTTaaa < 1:1018537/140‑1 (MQ=255)
|
ATTGCTATCGAGTGGCCAGGTAAAGTGGTAGAGGCCATTCTCCGGCTGACTAACGACGCTCCTGAGTACCTGCCCATCGGGTTTAATCACGTCTAACTTGATGGGTTGATTGGGCAACGCTTTACCGTCTGCATCACGCAGCAAACCATTGAGGATTACCGTTTCACCTGGGCGATAAAGATCGCGTGGGCCAAACATGAAAAACTGTTTGCTATAGCCTGGCGCGCCAGCAATGTTAAATTCTGCTAAGTCCAGCGCCGGAAGTTTTAAA > NC_000913/2650923‑2651193
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
