Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A8 F28 I1 R1 138 62.6 2119710 99.4% 2106991 138.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,326,966 C→T P286P (CCC→CCT)  atoB → acetyl‑CoA acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,326,9660CT100.0% 231.6 / NA 65P286P (CCC→CCT) atoBacetyl‑CoA acetyltransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (36/29);  total (36/29)

GTCACCGCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCCGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCT  >  NC_000913/2326832‑2327100
                                                                                                                                      |                                                                                                                                      
gTCACCGCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCAtt                                                                                                                                   >  2:570816/1‑140 (MQ=255)
 tCACCGCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTg                                                                                                                                  >  2:736244/1‑140 (MQ=255)
  cACCGCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGa                                                                                                                                 >  2:955465/1‑140 (MQ=255)
    ccGCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATg                                                                                                                               <  2:442458/140‑1 (MQ=255)
      gCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGAt                                                                                                                                <  1:56777/137‑1 (MQ=255)
      gCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGAt                                                                                                                                >  2:56777/1‑137 (MQ=255)
        tGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTa                                                                                                                           >  2:624909/1‑140 (MQ=255)
          ggAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATg                                                                                                                         <  2:113742/140‑1 (MQ=255)
          ggAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATg                                                                                                                         >  2:581587/1‑140 (MQ=255)
              cgcgTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGc                                                                                                                     <  1:613236/140‑1 (MQ=255)
                    tGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGAt                                                                                                                                <  1:41631/123‑1 (MQ=255)
                    tGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGAt                                                                                                                                >  2:41631/1‑123 (MQ=255)
                           aaCGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCAc                                                                                                        >  1:145569/1‑140 (MQ=255)
                                cgGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCaaa                                                                                                   >  1:300509/1‑140 (MQ=255)
                                 ggTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCaaaa                                                                                                  >  1:489337/1‑140 (MQ=255)
                                 ggTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCaaaa                                                                                                  >  1:51681/1‑140 (MQ=255)
                                   tgctgcCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAg                                                                                                >  2:1020886/1‑140 (MQ=255)
                                               ggTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTgg                                                                                    >  1:1039924/1‑140 (MQ=255)
                                               ggTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTgg                                                                                    <  2:489337/140‑1 (MQ=255)
                                                     tATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGc                                                                              >  2:1050182/1‑140 (MQ=255)
                                                          aagaaTCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCaa                                                                         >  2:592250/1‑140 (MQ=255)
                                                          aagaaTCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCaa                                                                         >  1:1028013/1‑140 (MQ=255)
                                                          aagaaTCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCaa                                                                         <  1:778598/140‑1 (MQ=255)
                                                               tCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGc                                                                    <  1:142889/140‑1 (MQ=255)
                                                               tCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGc                                                                    <  1:1020886/140‑1 (MQ=255)
                                                               tCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGc                                                                    >  1:969469/1‑140 (MQ=255)
                                                                 tGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCgg                                                                  <  1:1020660/140‑1 (MQ=255)
                                                                 tGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCgg                                                                  <  1:581587/140‑1 (MQ=255)
                                                                 tGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCgg                                                                  >  1:104742/1‑140 (MQ=255)
                                                                  gcggtgCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGa                                                                 >  1:636382/1‑140 (MQ=255)
                                                                  gcggcgCTGGCAGCAGGCCTTCCCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATCGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGa                                                                 <  2:945917/140‑1 (MQ=255)
                                                                   cggcgCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTTATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGat                                                                >  2:920853/1‑140 (MQ=255)
                                                                   cggcgCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGat                                                                >  1:710215/1‑140 (MQ=255)
                                                                    ggcgCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGata                                                               >  2:265296/1‑140 (MQ=255)
                                                                     gcgcTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGatat                                                              <  1:955465/140‑1 (MQ=255)
                                                                     gcgcTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGatat                                                              <  2:1046351/140‑1 (MQ=255)
                                                                       gcTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGc                                                                    <  2:542386/132‑1 (MQ=255)
                                                                       gcTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGc                                                                    >  1:542386/1‑132 (MQ=255)
                                                                        cTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGa                                                           <  1:920853/140‑1 (MQ=255)
                                                                        cTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGa                                                           <  2:300509/140‑1 (MQ=255)
                                                                         tGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGAt                                                          <  2:490457/140‑1 (MQ=255)
                                                                         tGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGAt                                                          <  2:636382/140‑1 (MQ=255)
                                                                              gcagGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCAt                                                     <  2:710215/140‑1 (MQ=255)
                                                                               cagGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCAtt                                                    <  2:969469/140‑1 (MQ=255)
                                                                                      tACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGAt                                                          >  2:502192/1‑127 (MQ=255)
                                                                                      tACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGAt                                                          <  1:502192/127‑1 (MQ=255)
                                                                                       aCCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTaa                                            >  1:818065/1‑140 (MQ=255)
                                                                                            ccTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGGTATTGATCTCATTGAGGCTAATGAAg                                       >  1:799994/1‑140 (MQ=255)
                                                                                             cTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGc                                      <  1:624909/140‑1 (MQ=255)
                                                                                             cTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGc                                      <  1:806636/140‑1 (MQ=255)
                                                                                             cTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGc                                      <  1:265296/140‑1 (MQ=255)
                                                                                              tGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCa                                     >  1:534819/1‑140 (MQ=255)
                                                                                                 cTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCAttt                                  >  1:235437/1‑140 (MQ=255)
                                                                                                     cATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAAt                                           <  2:680060/127‑1 (MQ=255)
                                                                                                     cATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAAt                                           >  1:680060/1‑127 (MQ=255)
                                                                                                     cATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTtgctg                              >  2:761722/1‑140 (MQ=255)
                                                                                                     cATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTtgctg                              >  2:186614/1‑140 (MQ=255)
                                                                                                                aTGCCAGCTGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGATGCTAATGAAGCATTTGCTGCACAGTTCCtt                   >  2:114242/1‑140 (MQ=255)
                                                                                                                aTGCCAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCtt                   >  2:465818/1‑140 (MQ=255)
                                                                                                                    cAGCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCg               <  1:465818/140‑1 (MQ=255)
                                                                                                                      gCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGtt             <  1:1050182/140‑1 (MQ=255)
                                                                                                                      gCGGTGGCGTGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGtt             >  2:27967/1‑140 (MQ=255)
                                                                                                                       cGGTGGCGTGCCCCCTGCACTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTg            >  1:1015409/1‑140 (MQ=255)
                                                                                                                               tGCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTACACAGTTCCTTGCCGTTGGGAAAAAc    >  1:543899/1‑140 (MQ=255)
                                                                                                                                gCCCCCTGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAAcc   <  2:966178/140‑1 (MQ=255)
                                                                                                                                 ccccctGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGGTATTGATCTCATTGAGGCTAATGAAGCAATTGCTGCACAGGTCCTTTCCGGTGGGGAAAAccc  >  2:97210/1‑139 (MQ=255)
                                                                                                                                      |                                                                                                                                      
GTCACCGCTGGGAACGCGTCTGGTATTAACGACGGTGCTGCCGCTCTGGTGATTATGGAAGAATCTGCGGCGCTGGCAGCAGGCCTTACCCCCCTGGCTCGCATTAAAAGTTATGCCAGCGGTGGCGTGCCCCCCGCATTGATGGGTATGGGGCCAGTACCTGCCACGCAAAAAGCGTTACAACTGGCGGGGCTGCAACTGGCGGATATTGATCTCATTGAGGCTAATGAAGCATTTGCTGCACAGTTCCTTGCCGTTGGGAAAAACCT  >  NC_000913/2326832‑2327100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A