Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A10 F28 I1 R1
|
126 |
72.5 |
2472046 |
99.4% |
2457213 |
138.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,467,427 |
A→G |
pseudogene (2036/2518 nt) |
ydbA → |
putative outer membrane protein, N‑terminal fragment |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,467,427 | 0 | A | G | 100.0%
| 433.1
/ NA
| 116 | pseudogene (2036/2518 nt) | ydbA | putative outer membrane protein, N‑terminal fragment |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (51/65); total (51/65) |
Only 100 of 116 total aligned reads displayed.
AGATCTTAATGGCAACAATAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGATAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCAGAG > NC_000913/1467290‑1467562
|
tAATGGCAACAATAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCg > 2:468854/1‑140 (MQ=255)
aaTGGCAACAATAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGc > 1:900819/1‑140 (MQ=255)
caacaaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCTATGCGAATAGAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACa > 2:1103750/1‑140 (MQ=255)
caacaaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACa > 2:142180/1‑140 (MQ=255)
caacaaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACa > 2:216289/1‑140 (MQ=255)
caacaaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACa > 1:685452/1‑140 (MQ=255)
aacaaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACaa > 1:351669/1‑140 (MQ=255)
aacaaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACaa > 1:535868/1‑140 (MQ=255)
acaaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAAt > 1:270643/1‑140 (MQ=255)
acaaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAAt < 1:1164582/140‑1 (MQ=255)
acaaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAAt < 2:413567/140‑1 (MQ=255)
caaTAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATg < 2:699934/140‑1 (MQ=255)
tAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATgcgg < 2:270643/140‑1 (MQ=255)
aCAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATgcggcg < 1:787071/140‑1 (MQ=255)
aCAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATgcggcg < 2:390170/140‑1 (MQ=255)
gTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGaa < 2:810395/138‑1 (MQ=255)
gTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAata < 1:468854/140‑1 (MQ=255)
gTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAata > 1:581454/1‑140 (MQ=255)
tGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATgcgg < 1:535696/132‑1 (MQ=255)
tGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATgcgg > 2:535696/1‑132 (MQ=255)
tGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAatat > 1:581977/1‑140 (MQ=255)
tGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAatat > 2:497896/1‑140 (MQ=255)
cTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATttctt < 2:1058338/140‑1 (MQ=255)
cTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATttctt < 2:900819/140‑1 (MQ=255)
cTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATttctt > 2:1179709/1‑140 (MQ=255)
gcggcAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGa > 1:1200479/1‑140 (MQ=255)
cggcAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGat < 1:578483/140‑1 (MQ=255)
cggcAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGat < 1:808336/140‑1 (MQ=255)
cggcAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGat < 2:351669/140‑1 (MQ=255)
cggcAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGat < 1:259937/140‑1 (MQ=255)
cggcAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGat < 2:535868/140‑1 (MQ=255)
cggcAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCAat < 1:79172/140‑1 (MQ=255)
ggcAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGatc < 2:1200479/140‑1 (MQ=255)
ggcAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGatc < 1:122252/140‑1 (MQ=255)
gATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGt < 2:1199554/140‑1 (MQ=255)
aTCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGatc > 2:215329/1‑132 (MQ=255)
aTCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGatc < 1:215329/132‑1 (MQ=255)
aTCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGt > 2:188644/1‑139 (MQ=255)
aTCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGt < 1:188644/139‑1 (MQ=255)
aGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCa < 1:942045/140‑1 (MQ=255)
ggTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATc > 2:785670/1‑136 (MQ=255)
ggTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATc < 1:785670/136‑1 (MQ=255)
gTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTAt < 2:970720/134‑1 (MQ=255)
gTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTAt > 1:970720/1‑134 (MQ=255)
gTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGt > 1:192789/1‑140 (MQ=255)
gTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGt > 2:79800/1‑140 (MQ=255)
gTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGt > 2:160104/1‑140 (MQ=255)
gTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGt > 1:56800/1‑140 (MQ=255)
gTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGt > 2:128054/1‑140 (MQ=255)
gCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACg < 2:609552/140‑1 (MQ=255)
cAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACgg < 1:657936/140‑1 (MQ=255)
aGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGc < 1:79800/140‑1 (MQ=255)
aGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGc < 1:752979/140‑1 (MQ=255)
aGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGc < 2:380894/140‑1 (MQ=255)
gAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCa < 2:338819/140‑1 (MQ=255)
gAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCa < 1:128054/140‑1 (MQ=255)
aaGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACg > 2:815507/1‑135 (MQ=255)
aaGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACg < 1:815507/135‑1 (MQ=255)
actggCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGataa > 2:798245/4‑140 (MQ=255)
aCGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGataa > 1:943868/1‑140 (MQ=255)
gCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAAc > 1:459292/1‑140 (MQ=255)
cGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGc < 2:1066395/140‑1 (MQ=255)
gTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCt < 1:798245/140‑1 (MQ=255)
cTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCtggat < 2:56800/140‑1 (MQ=255)
ggCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCtggatgg > 1:1066762/1‑140 (MQ=255)
ggCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCtggatgg > 2:58572/1‑140 (MQ=255)
gCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGtt < 2:581454/140‑1 (MQ=255)
gCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGtt < 2:943868/140‑1 (MQ=255)
cGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTa < 1:216289/140‑1 (MQ=255)
tACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACtg < 1:1179709/140‑1 (MQ=255)
tACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACtg < 2:459292/140‑1 (MQ=255)
gTGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACtgttgt < 1:467637/140‑1 (MQ=255)
tGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGtt < 2:701324/130‑1 (MQ=255)
tGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGtt > 1:701324/1‑130 (MQ=255)
tGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAAc < 2:947624/133‑1 (MQ=255)
tGAATATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTa > 2:79442/1‑140 (MQ=255)
aaTATCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATc > 2:406026/1‑140 (MQ=255)
atatCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCtggatgga > 1:465229/1‑122 (MQ=255)
atatCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGtt > 1:824135/1‑127 (MQ=255)
atatCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAAc > 1:830467/1‑130 (MQ=255)
atatCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAAc < 2:830467/130‑1 (MQ=255)
atCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGa > 2:167751/1‑140 (MQ=255)
tCACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGAc < 1:406026/140‑1 (MQ=255)
cACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACtgtt > 2:1691/1‑130 (MQ=255)
cACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACtgtt < 1:1691/130‑1 (MQ=255)
cACTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACa < 2:640154/140‑1 (MQ=255)
aCTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGTCGCTGGATGGAAAGTTAAc < 2:289797/125‑1 (MQ=255)
aCTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAAc > 1:289797/1‑125 (MQ=255)
aCTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAg < 1:160104/140‑1 (MQ=255)
cTGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGt < 2:52453/140‑1 (MQ=255)
tGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACtg > 2:311847/1‑125 (MQ=255)
tGGTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACtg < 1:311847/125‑1 (MQ=255)
gTAACGTTCTGGTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAg > 1:559526/1‑140 (MQ=255)
ggTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACt > 1:73468/1‑136 (MQ=255)
ggTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTtctc > 1:678239/1‑140 (MQ=255)
gTTGATAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCg > 2:898435/1‑140 (MQ=255)
aTAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCag < 2:685452/140‑1 (MQ=255)
aTAAGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCag > 1:1034994/1‑140 (MQ=255)
aaGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCagag < 1:375958/140‑1 (MQ=255)
aaGGGTAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCagag > 1:338781/1‑140 (MQ=255)
|
AGATCTTAATGGCAACAATAACAGCGTGACGCTGGCGGCAAAAGATCTAAAAGTGGTCGGGCAGAAAGCGACGGGCATAAACGTTTCTGGCGATGCGAATACAGTGAATATCACTGGTAACGTTCTGGTTGATAAGGATAAAACCGCAGACAATGCGGCGGAATATTTCTTCGATCCATCCGTGGGTATCAACGTTTACGGCAGTGATAATAACGTGACGCTGGATGGAAAGTTAACTGTTGTATCAGACAGTGAGGTTACTTCTCGTCAGAG > NC_000913/1467290‑1467562
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
