Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A10 F28 I1 R1 126 72.5 2472046 99.4% 2457213 138.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,649,857 T→C V308A (GTA→GCA)  arsB → arsenite/antimonite:H(+) antiporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,649,8570TC100.0% 293.7 / NA 81V308A (GTA→GCA) arsBarsenite/antimonite:H(+) antiporter
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/40);  total (41/40)

GCTAAACGCGGTCATGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTGATGGCAGCAC  >  NC_000913/3649721‑3649989
                                                                                                                                        |                                                                                                                                    
gCTAAACGCGGTCATGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACt                                                                                                                                   >  1:101149/1‑140 (MQ=255)
 cTAAACGCGGTCATGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTc                                                                                                                                  >  1:485761/1‑140 (MQ=255)
     aCGCGGTCATGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACg                                                                                                                              <  1:1036358/140‑1 (MQ=255)
           tCATGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCCGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTgg                                                                                                                        <  1:513683/140‑1 (MQ=255)
              tGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCgg                                                                                                                     >  1:257587/1‑140 (MQ=255)
                cGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGAt                                                                                                                   <  2:719311/140‑1 (MQ=255)
                 gATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATa                                                                                                                  >  1:122291/1‑140 (MQ=255)
                   ttAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAAc                                                                                                                <  1:946992/140‑1 (MQ=255)
                     cctACGGGTAAAGTCCTGCGCGGGGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTCTGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCGGATAACgg                                                                                                              >  2:77729/3‑140 (MQ=255)
                     aaTACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACgg                                                                                                              >  1:728340/1‑140 (MQ=255)
                     aaTACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACgg                                                                                                              <  2:122291/140‑1 (MQ=255)
                          gggTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCT‑GCGGATAACGGCCtgtg                                                                                                        <  2:174586/140‑1 (MQ=255)
                           ggTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCtgtg                                                                                                        >  2:167577/1‑140 (MQ=255)
                            gTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTgg                                                                                                       >  1:119412/1‑140 (MQ=255)
                            gTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTgg                                                                                                       >  1:824798/1‑140 (MQ=255)
                            gTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTgg                                                                                                       >  2:1191331/1‑140 (MQ=255)
                               aaGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGcc                                                                                                    >  1:28277/1‑140 (MQ=255)
                                aGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCcg                                                                                                   >  2:700557/1‑140 (MQ=255)
                                aGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCcg                                                                                                   <  1:597621/140‑1 (MQ=255)
                                   ccTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGa                                                                                                <  2:119412/140‑1 (MQ=255)
                                     tGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACg                                                                                              >  2:799189/1‑140 (MQ=255)
                                      gcgcGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGc                                                                                             >  2:249866/1‑140 (MQ=255)
                                      gcgcGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGc                                                                                             >  1:481304/1‑140 (MQ=255)
                                      gcgcGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGc                                                                                             >  2:1096987/1‑140 (MQ=255)
                                       cgcgGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGcc                                                                                            >  1:599539/1‑139 (MQ=255)
                                           gTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGc                                                                                        >  1:527509/1‑140 (MQ=255)
                                            tGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCa                                                                                       >  2:65080/1‑140 (MQ=255)
                                              cccccTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGcccc                                                                                     >  1:1044380/1‑140 (MQ=255)
                                                 ccTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGa                                                                                  <  2:599539/140‑1 (MQ=255)
                                                   tGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGAtt                                                                                >  1:1233118/1‑140 (MQ=255)
                                                   tGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGAtt                                                                                >  1:656718/1‑140 (MQ=255)
                                                      cAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCt                                                                             >  1:412769/1‑140 (MQ=255)
                                                      cAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTCTGGGCCGCGACGCTCGGCACCGGATTCCt                                                                             >  2:441891/1‑140 (MQ=255)
                                                        gATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCa                                                                           >  2:948140/1‑140 (MQ=255)
                                                        gATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCa                                                                           <  2:41031/140‑1 (MQ=255)
                                                             tCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCa                                                                           <  2:771933/135‑1 (MQ=255)
                                                             tCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCa                                                                           >  1:771933/1‑135 (MQ=255)
                                                             tCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGcc                                                                      <  1:396848/140‑1 (MQ=255)
                                                             tCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGcc                                                                      <  2:426185/140‑1 (MQ=255)
                                                              cATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCt                                                                     <  1:1096987/140‑1 (MQ=255)
                                                               aTCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCtt                                                                    >  1:487912/1‑140 (MQ=255)
                                                               aTCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCtt                                                                    >  1:243326/1‑140 (MQ=255)
                                                                tcttctCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTc                                                                   <  2:485761/140‑1 (MQ=255)
                                                                tcttctCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTc                                                                   <  2:243326/140‑1 (MQ=255)
                                                                tcttctCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTc                                                                   <  2:487912/140‑1 (MQ=255)
                                                                  ttctCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCct                                                                 <  2:527509/140‑1 (MQ=255)
                                                                  ttctCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCct                                                                 <  2:1233118/140‑1 (MQ=255)
                                                                   tctcGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGcc                                                                      <  2:1113470/134‑1 (MQ=255)
                                                                   tctcGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGcc                                                                      >  1:1113470/1‑134 (MQ=255)
                                                                    ctcgctcgGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCctct                                                               >  1:1137022/1‑140 (MQ=255)
                                                                       gctcgGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCtctt                                                            <  2:101149/140‑1 (MQ=255)
                                                                       gctcgGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCtctt                                                            <  2:28277/140‑1 (MQ=255)
                                                                          cgGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCta                                                         <  1:249866/140‑1 (MQ=255)
                                                                              aTGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTCTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCtattat                                                     <  1:441891/140‑1 (MQ=255)
                                                                                          gtTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGcc                                         >  2:1051092/1‑140 (MQ=255)
                                                                                           tttATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAAc                                                 >  1:21936/1‑131 (MQ=255)
                                                                                           tttATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAAc                                                 <  2:21936/131‑1 (MQ=255)
                                                                                           tttATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAACATGCCg                                        >  2:272440/1‑140 (MQ=255)
                                                                                            ttATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGa                                       <  1:700557/140‑1 (MQ=255)
                                                                                            ttATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGa                                       <  2:257587/140‑1 (MQ=255)
                                                                                            ttATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAACATGCCGa                                       <  1:272440/140‑1 (MQ=255)
                                                                                             tATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCtattat                                                     <  1:411499/125‑1 (MQ=255)
                                                                                             tATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCtattat                                                     >  2:411499/1‑125 (MQ=255)
                                                                                             tATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGAc                                      >  1:747905/1‑140 (MQ=255)
                                                                                                   cTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACt                                <  1:167577/140‑1 (MQ=255)
                                                                                                      cgcAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGt                             >  1:591498/1‑140 (MQ=255)
                                                                                                      cgcAATGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGt                             >  2:1195705/1‑140 (MQ=255)
                                                                                                           tGCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGgcg                        >  1:828837/1‑140 (MQ=255)
                                                                                                            gCCGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGgcgc                       <  1:743650/140‑1 (MQ=255)
                                                                                                             ccGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGcgcg                      <  2:1044380/140‑1 (MQ=255)
                                                                                                             ccGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGcgcg                      <  1:1191331/140‑1 (MQ=255)
                                                                                                             ccGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGcgcg                      <  2:747905/140‑1 (MQ=255)
                                                                                                             ccGGATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGcgcg                      <  2:412769/140‑1 (MQ=255)
                                                                                                               ggATTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGtt                    <  2:602356/140‑1 (MQ=255)
                                                                                                                 aTTAACGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGt                  <  1:799189/140‑1 (MQ=255)
                                                                                                                     aCGGAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCAt              >  1:249037/1‑140 (MQ=255)
                                                                                                                       ggAATATCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTg            >  1:498141/1‑140 (MQ=255)
                                                                                                                           tatCTTTCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTGATgg        >  2:1118931/1‑140 (MQ=255)
                                                                                                                                 tCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTGATGGCAGCAc  <  2:656718/140‑1 (MQ=255)
                                                                                                                                 tCTGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTGATGGCAGCAc  <  2:239942/140‑1 (MQ=255)
                                                                                                                                   tGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTGATgg        <  2:740460/132‑1 (MQ=255)
                                                                                                                                   tGGCGCACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTGATgg        >  1:740460/1‑132 (MQ=255)
                                                                                                                                        |                                                                                                                                    
GCTAAACGCGGTCATGCGATTAATACGGGTAAAGTCCTGCGCGGTGCCCCCTGGCAGATTGTCATCTTCTCGCTCGGCATGTATCTGGTGGTTTATGGCCTGCGCAATGCCGGATTAACGGAATATCTTTCTGGCGTACTCAACGTGCTGGCGGATAACGGCCTGTGGGCCGCGACGCTCGGCACCGGATTCCTCACCGCCTTCCTCTCTTCTATTATGAACAATATGCCGACGGTACTGGTTGGCGCGTTGTCCATTGATGGCAGCAC  >  NC_000913/3649721‑3649989

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A