Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A5 F28 I1 R1	108	95.2	3177646	99.2%	3152224	139.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,626,876	T→C	T169A (ACC→GCC)	dcp ←	peptidyl‑dipeptidase Dcp

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,626,876	0	T	C	100.0%	222.0 / NA	59	T169A (ACC→GCC)	dcp	peptidyl‑dipeptidase Dcp
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (25/34); total (25/34)

TCCAGACCTTTCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGTCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCAAGCCCCAGGGATTC  >  NC_000913/1626740‑1627011

tCCAGACCTTTCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAg                                                                                                                                      >  1:1510291/1‑140 (MQ=255)

     aCCTTTCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCg                                                                                                                                 >  1:1241971/1‑140 (MQ=255)

     aCCTTTCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCg                                                                                                                                 >  2:499825/1‑140 (MQ=255)

      ccTTTCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGc                                                                                                                                <  1:730725/140‑1 (MQ=255)

      ccTTTCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGc                                                                                                                                <  1:1549601/140‑1 (MQ=255)

       cTTTCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCa                                                                                                                               >  2:1224656/1‑140 (MQ=255)

        tttCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAg                                                                                                                              <  1:195878/140‑1 (MQ=255)

        tttCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAg                                                                                                                              <  2:549614/140‑1 (MQ=255)

           ctcGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCtt                                                                                                                           <  1:1446389/140‑1 (MQ=255)

             cgcgAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCt                                                                                                                         <  1:1570391/140‑1 (MQ=255)

                    cgccTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCa                                                                                                                  <  1:1008635/140‑1 (MQ=255)

                    cgccTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCa                                                                                                                  <  2:262946/140‑1 (MQ=255)

                               ccAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAAt                                                                                                       <  2:1510291/140‑1 (MQ=255)

                                   cgcAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTg                                                                                                   <  1:1283889/140‑1 (MQ=255)

                                    gcAATCTCTTGCTCACTCATTCCTGCCAGCTGTGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTCTTAATTTTGc                                                                                                  >  2:1135445/1‑140 (MQ=255)

                                         ctctTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTAt                                                                                             <  1:165118/140‑1 (MQ=255)

                                             tGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGc                                                                                         >  1:520130/1‑140 (MQ=255)

                                             tGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGc                                                                                         >  2:1254866/1‑140 (MQ=255)

                                                    tcaTTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCa                                                                                  >  1:1503505/1‑140 (MQ=255)

                                                       ttCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGt                                                                               <  2:124148/140‑1 (MQ=255)

                                                             ccAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCt                                                                         <  1:469084/140‑1 (MQ=255)

                                                              cAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTc                                                                        >  1:1284003/1‑140 (MQ=255)

                                                              cAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTc                                                                        >  2:567242/1‑140 (MQ=255)

                                                                gCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCg                                                                      >  1:62671/1‑140 (MQ=255)

                                                                  tGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGc                                                                    <  2:1306020/140‑1 (MQ=255)

                                                                  tGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGc                                                                    >  2:647738/1‑140 (MQ=255)

                                                                      cgATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAgg                                                                >  2:1317529/1‑140 (MQ=255)

                                                                          atCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACaa                                                            >  1:234373/1‑140 (MQ=255)

                                                                                 acaGCCAGTCCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCGGCGGCAAGGACATACCGTtg                                                     <  2:919699/140‑1 (MQ=255)

                                                                                     ccAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTtgatga                                                 <  1:482390/140‑1 (MQ=255)

                                                                                      cAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGaa                                                >  2:1426190/1‑140 (MQ=255)

                                                                                      cAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGaa                                                <  2:1212804/140‑1 (MQ=255)

                                                                                       aGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTTCTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAAt                                               <  1:1011088/140‑1 (MQ=255)

                                                                                       aGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAAt                                               <  1:1431028/140‑1 (MQ=255)

                                                                                         aCCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCa                                             >  2:281449/1‑140 (MQ=255)

                                                                                          ccgccgGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCAc                                            <  1:251613/140‑1 (MQ=255)

                                                                                            gccgGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCt                                          <  1:976401/140‑1 (MQ=255)

                                                                                             ccgGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTc                                         >  1:459936/1‑140 (MQ=255)

                                                                                             ccgGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTc                                         >  1:1411792/1‑140 (MQ=255)

                                                                                             ccgGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTc                                         >  1:23516/1‑140 (MQ=255)

                                                                                             ccgGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTc                                         >  2:890112/1‑140 (MQ=255)

                                                                                                   ttatttGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTTGCTCCCGCCAGGACAAAACGTTGGTGGATCACCCccacccg                                   >  2:111484/1‑138 (MQ=255)

                                                                                                       ttGCTGCCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCgg                               <  1:825903/140‑1 (MQ=255)

                                                                                                           tgcCAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCggatgg                           >  1:32596/1‑140 (MQ=255)

                                                                                                              cAGTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGAtt                        <  1:822515/140‑1 (MQ=255)

                                                                                                                gTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCa                      <  1:206100/140‑1 (MQ=255)

                                                                                                                gTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCa                      <  1:1205537/140‑1 (MQ=255)

                                                                                                                gTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCa                      >  1:1183511/1‑140 (MQ=255)

                                                                                                                gTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCa                      <  1:1425832/140‑1 (MQ=255)

                                                                                                                gTAATCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCa                      <  2:1064728/140‑1 (MQ=255)

                                                                                                                   aTCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTa                   <  1:176667/140‑1 (MQ=255)

                                                                                                                    tCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTAt                  <  1:111484/140‑1 (MQ=255)

                                                                                                                    tCGCTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTAt                  <  1:1317529/140‑1 (MQ=255)

                                                                                                                       cTGGTTAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCaa               >  2:139220/1‑140 (MQ=255)

                                                                                                                           ttAAACTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCAAGccc           <  2:1241971/140‑1 (MQ=255)

                                                                                                                             aaaCTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCAAGCCCCa         <  2:1503505/140‑1 (MQ=255)

                                                                                                                             aaaCTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCAAGCCCCa         <  2:520130/140‑1 (MQ=255)

                                                                                                                             aaaCTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCAAGCCCCa         <  2:234373/140‑1 (MQ=255)

                                                                                                                               aCTGGCTGGCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCAAGCCCCAgg       <  2:1284003/140‑1 (MQ=255)

                                                                                                                                    ctggCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCAAGCCCCAGGGATTc  >  2:805226/1‑140 (MQ=255)

                                                                                                                                    ctggCCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCAAGCCCCAGGGATTc  >  2:993976/1‑140 (MQ=255)

TCCAGACCTTTCTCGCGAGCCGCCTCTGCCGCCAGCGCAATCTCTTGCTCACTCATTCCTGCCAGCTGCGCGATATCGTTCACAACCAGACCGCCGGATTTATTTGCTGCCAGTAATCGCTGGTTAAACTGGCTGGTCAGGGTCGCAGCTTCTGTATTCAGTACTTTTAATTTTGCTTTATCAGCTTGCGCAAGTTTGGCTCCGGCAAGGACAAAACGTTGATGAATCACCTCCACCAGGCGGATGGATTCACTATCAAGCCCCAGGGATTC  >  NC_000913/1626740‑1627011

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A