Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A7 F60 I1 R1 26 145.4 4915572 98.9% 4861500 138.8

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 4,377,110 Δ5 bp coding (236‑240/318 nt) gdx → guanidinium exporter

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 4377110 4377114 5 155 [0] [0] 156 gdx guanidinium exporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 43771090 (0.000)154 (1.070) 70/274 0.4 100% coding (235/318 nt) gdx guanidinium exporter
?NC_000913 4377115 = 0 (0.000)coding (241/318 nt) gdx guanidinium exporter

GATK/CNVnator alignment

N/A