Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I1 R1
|
28 |
562.2 |
19051950 |
96.7% |
18423235 |
140.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,071,056 |
T→C |
pseudogene (271/426 nt) |
yeeP → |
CP4‑44 prophage; putative GTP‑binding protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,071,056 | 0 | T | C | 99.6%
| 2231.6
/ ‑4.5
| 526 | pseudogene (271/426 nt) | yeeP | CP4‑44 prophage; putative GTP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base C (269/255); total (270/256) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 531 total aligned reads displayed.
CCCGTACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTATGGAACTGGAT > NC_000913/2070909‑2071201
|
ccGTACATCCGGTTGTGGCCGGATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGcctc < 2:3958052/150‑1 (MQ=255)
cGTACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCa < 1:3957744/150‑1 (MQ=255)
gTACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAg > 1:3958464/1‑150 (MQ=255)
tACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAgg > 1:3958469/1‑150 (MQ=255)
cATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGcc > 1:3958474/1‑150 (MQ=255)
aTCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGccc < 1:3957771/150‑1 (MQ=255)
ggTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTg > 1:3958485/1‑149 (MQ=255)
tgtgGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGGGa > 2:3958490/1‑147 (MQ=255)
tgGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGt < 2:3957955/150‑1 (MQ=255)
gTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTAcc > 1:3958501/1‑150 (MQ=255)
tCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGccc > 2:3958505/1‑133 (MQ=255)
cGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACcggtg > 1:3958509/1‑150 (MQ=255)
ggCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACcggtgc < 1:3958170/150‑1 (MQ=255)
cccGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACcggtgcgg > 2:3958514/1‑150 (MQ=255)
cGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACcggtgcggtg < 2:3957928/150‑1 (MQ=255)
cGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACcggtgcggtg > 1:3958522/1‑150 (MQ=255)
cACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGa < 2:3958123/150‑1 (MQ=255)
aCCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGa < 1:3957939/149‑1 (MQ=255)
ccGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGAcc > 1:3958529/1‑150 (MQ=255)
ccGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGAcc > 2:3958528/1‑150 (MQ=255)
cGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCg < 1:3957978/150‑1 (MQ=255)
tGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGata > 2:3958539/1‑150 (MQ=255)
tGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGata > 1:3958540/1‑150 (MQ=255)
ggAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGatat < 1:3957920/149‑1 (MQ=255)
gAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATAttt < 2:3958110/150‑1 (MQ=255)
gAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATAttt > 1:3958547/1‑150 (MQ=255)
gAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCAAGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAAc < 2:3957699/121‑1 (MQ=255)
ggATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGacac > 2:3958553/1‑150 (MQ=255)
gATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACAcg < 1:3957946/150‑1 (MQ=255)
tACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACAcggc > 1:3958562/1‑150 (MQ=255)
gCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACAcggcg > 1:3958567/1‑148 (MQ=255)
cTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGCCCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGttt > 2:3958570/1‑114 (MQ=255)
cTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGgag < 1:3958080/150‑1 (MQ=255)
tGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGGAGGACGAGCGGCGCACGGAATCCGTCCGGCCTCAGGCCCGt > 2:3958576/1‑104 (MQ=255)
tGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGga > 1:3958575/1‑148 (MQ=255)
ggTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATAttt < 2:3957766/136‑1 (MQ=255)
gTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGgaga < 1:3957878/148‑1 (MQ=255)
gTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGgaga < 2:3957815/148‑1 (MQ=255)
tCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCg < 2:3957803/150‑1 (MQ=255)
aGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGt < 2:3957838/149‑1 (MQ=255)
aGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGt < 1:3958058/149‑1 (MQ=255)
aGTGCGCTCATGACAGCGCTTCCCGACCAGGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACAcggcg < 2:3957974/141‑1 (MQ=255)
tGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTg < 1:3957530/150‑1 (MQ=255)
gcgcTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCCCGGAATCTGTCCGGCCTCAGGCCCg > 2:3958588/1‑95 (MQ=255)
gcgcTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTg > 1:3958589/1‑149 (MQ=255)
cgcTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCt < 2:3958008/147‑1 (MQ=255)
cgcTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGt < 2:3958343/149‑1 (MQ=255)
cTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTAtt > 1:3958599/1‑150 (MQ=255)
tCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTAtt < 2:3958033/149‑1 (MQ=255)
cATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACAcggc > 2:3958602/1‑132 (MQ=255)
aTGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGcc > 1:3958606/1‑150 (MQ=255)
tGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCct < 1:3957694/150‑1 (MQ=255)
ggACAGCGCTTCCCGACCATGCCGCCAGGCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGatat < 2:3957860/119‑1 (MQ=255)
aGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTTCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGt > 2:3958613/1‑150 (MQ=255)
aGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGt < 1:3958223/150‑1 (MQ=255)
aGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGt < 1:3957837/150‑1 (MQ=255)
gcgcTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGtt > 1:3958619/1‑150 (MQ=255)
gcTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGCGAGc < 2:3958068/130‑1 (MQ=255)
gcTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGNGCGTCTGTATTGCCTCTGTTg > 2:3958624/1‑149 (MQ=255)
cTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTgca < 1:3958013/150‑1 (MQ=255)
cTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTgca > 1:3958627/1‑150 (MQ=255)
cccGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTgcac < 2:3958464/148‑1 (MQ=255)
ccGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTgcacgca < 2:3958088/150‑1 (MQ=255)
ccGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCCGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTgcacgc < 1:3958031/149‑1 (MQ=255)
cGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTgcacgcac > 1:3958637/1‑150 (MQ=255)
cGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTgcacg > 2:3958636/1‑147 (MQ=255)
ccATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGt > 2:3958645/1‑150 (MQ=255)
cATGCCGCCAGGCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGtt < 1:3958135/150‑1 (MQ=255)
gccgccAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGttgt > 1:3958652/1‑147 (MQ=255)
gccAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGt > 1:3958659/1‑150 (MQ=255)
cAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGTCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCt < 2:3957872/116‑1 (MQ=255)
cAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGc < 1:3958326/150‑1 (MQ=255)
cAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTATCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGTCACGGCGGAGAGCGTCTGTAGTGCCTGTGTTGCACGCACGGTTCTGCGTGc > 1:3958664/1‑150 (MQ=255)
aGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGc > 2:3958665/1‑149 (MQ=255)
gTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGccg < 2:3958156/150‑1 (MQ=255)
gTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGCAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATNTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGccg < 1:3958184/150‑1 (MQ=255)
ccccTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTNTCCGGCCTCAGGCCCGTGAACAGTTTATCGCTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCt < 2:3957395/140‑1 (MQ=255)
ccccTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGccgtc > 1:3958672/1‑150 (MQ=255)
cccTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTTCGGTGGACCGGATATTTGACACGGCTgag < 2:3957904/104‑1 (MQ=255)
ccTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGc > 2:3958676/1‑140 (MQ=255)
atgaCCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGa < 2:3958178/149‑1 (MQ=255)
gaCCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGNGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGacac > 2:3958683/1‑150 (MQ=255)
aCCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACg > 1:3958688/1‑150 (MQ=255)
cGACTGCAGGACGAGCTGCGCACGGAATATGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTgcacg > 2:3958693/1‑119 (MQ=255)
aCTGCAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACggtggt > 1:3958698/1‑150 (MQ=255)
cAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGtct < 1:3957997/148‑1 (MQ=255)
cAGGACGAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTctct > 1:3958704/1‑150 (MQ=255)
gAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGcc > 1:3958715/1‑150 (MQ=255)
gAGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGcc > 2:3958712/1‑150 (MQ=255)
aGCTGCGCACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGccc < 1:3958279/150‑1 (MQ=255)
gcACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCgg > 1:3958724/1‑150 (MQ=255)
gcACGGAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCg > 2:3958724/1‑149 (MQ=255)
aCGGAATCTGGCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGt < 2:3958232/149‑1 (MQ=255)
ggAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGccgtccg > 2:3958733/1‑117 (MQ=255)
ggAATCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTATg > 1:3958733/1‑150 (MQ=255)
aaTCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTATGGa < 2:3958018/150‑1 (MQ=255)
aTCTGTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTATGGaa < 1:3958108/150‑1 (MQ=255)
gTCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTATGGAACTg > 1:3958745/1‑149 (MQ=255)
tCCGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTATGGAAc < 1:3958354/146‑1 (MQ=255)
cGGCCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTAt < 2:3958255/139‑1 (MQ=255)
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CCCGTACATCCGGTTGTGGCCGTATCGGCCCGCACCGGCTGGGAACTGGATACGCTGGTCAGTGCGCTCATGACAGCGCTTCCCGACCATGCCGCCAGTCCCCTGATGACCCGACTGCAGGACGAGCTGCGCACGGAATCTGTCCGGTCTCAGGCCCGTGAACAGTTTACCGGTGCGGTGGACCGGATATTTGACACGGCGGAGAGCGTCTGTATTGCCTCTGTTGCACGCACGGTTCTGCGTGCCGTCCGTGACACGGTGGTCTCTGTTGCCCGTGCGGTATGGAACTGGAT > NC_000913/2070909‑2071201
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
