Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F13 I1 R1
|
28 |
562.2 |
19051950 |
96.7% |
18423235 |
140.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,488,684 |
T→C |
Y632H (TAT→CAT) |
yhfK → |
putative transporter YhfK |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,488,684 | 0 | T | C | 99.5%
| 2581.6
/ ‑4.8
| 616 | Y632H (TAT→CAT) | yhfK | putative transporter YhfK |
| Reads supporting (aligned to +/- strand): ref base T (0/3); new base C (312/300); total (312/304) |
| Fisher's exact test for biased strand distribution p-value = 1.19e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 616 total aligned reads displayed.
TGGGTAACGCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGTATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTTCGTCGATGGC > NC_000913/3488537‑3488829
|
tgGGTAACGCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCAt < 1:6817127/150‑1 (MQ=255)
tgGGTAACGCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCAt < 1:6817340/150‑1 (MQ=255)
ggTAACGCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGa < 2:6817452/150‑1 (MQ=255)
tAACGCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGAc > 2:6817839/1‑149 (MQ=255)
gCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAAcc < 1:6817593/150‑1 (MQ=255)
cacaGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTCACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCg > 2:6817853/1‑150 (MQ=255)
caGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCgg > 1:6817859/1‑149 (MQ=255)
gCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCgg > 2:6817864/1‑147 (MQ=255)
gCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTAAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGTAt < 2:6817210/137‑1 (MQ=255)
gCCAGATTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCgg > 1:2243749/1‑147 (MQ=255)
cAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGt > 1:6817872/1‑150 (MQ=255)
tttATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCt > 2:6817880/1‑150 (MQ=255)
tATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTg < 1:6817455/149‑1 (MQ=255)
aTTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACCAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTgg > 2:6817889/1‑149 (MQ=255)
ttgttgAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGc < 1:6817491/149‑1 (MQ=255)
tgttgAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGa > 1:6817894/1‑150 (MQ=255)
cATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGTGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATg < 2:6817396/121‑1 (MQ=255)
cATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCaa < 1:6816839/149‑1 (MQ=255)
cATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCAGTCAGCGTTGTCAGCAGCGACTGGAGCGTGACGAACCgggga > 2:6817902/1‑131 (MQ=255)
tatTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAatat > 1:6817911/1‑150 (MQ=255)
aaTGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATg > 2:6817919/1‑150 (MQ=255)
tGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGa > 1:6817926/1‑150 (MQ=255)
ccATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGAt < 2:6817420/149‑1 (MQ=255)
ccATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATg < 1:6817321/150‑1 (MQ=255)
cATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATg > 1:6817934/1‑149 (MQ=255)
cATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATg < 2:6817311/149‑1 (MQ=255)
tGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATgcgc > 2:6817936/1‑150 (MQ=255)
ccACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATg > 2:6817944/1‑129 (MQ=255)
aCGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCgg < 2:6817576/148‑1 (MQ=255)
aCGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCg > 1:6817953/1‑147 (MQ=255)
aCGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGgag < 1:6817543/150‑1 (MQ=255)
cGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCg > 2:6817959/1‑146 (MQ=255)
gCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGAt > 1:6817965/1‑150 (MQ=255)
cTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATg < 1:6816958/150‑1 (MQ=255)
tGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGAATGGAGCATGACGAACCGGGTCGTTCTGGCGATGCCaa > 2:6817970/1‑127 (MQ=255)
gcgGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAAACGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATgc > 2:6817978/1‑135 (MQ=255)
gggAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCAt < 1:6817053/92‑1 (MQ=255)
ggAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCg < 2:6817332/100‑1 (MQ=255)
ggAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCa > 1:6817984/1‑150 (MQ=255)
acacCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGa < 1:6817382/150‑1 (MQ=255)
acCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAACCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGGAGTTCTGGCGATGCCAATATCATg < 2:6816993/122‑1 (MQ=255)
cGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCa > 2:6817991/1‑143 (MQ=255)
cGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGgc < 1:6817561/150‑1 (MQ=255)
ggCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATg < 2:6817484/133‑1 (MQ=255)
ggCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGgcg < 2:6817254/149‑1 (MQ=255)
aTTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCgg > 1:6817999/1‑149 (MQ=255)
cACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGCTGTCAGCAGCGACGGGAGCATGACGAACCGGGGAGTTCTGGCGATGCCAATATCATGGATgcgc > 2:6818004/1‑117 (MQ=255)
aCCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTAc < 1:6817414/150‑1 (MQ=255)
aCCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTAc < 2:6817629/150‑1 (MQ=255)
cTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGc > 1:6818009/1‑150 (MQ=255)
aaCTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTg > 2:6818015/1‑149 (MQ=255)
tGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGag > 1:6818024/1‑149 (MQ=255)
cacaAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCCGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGCGATGCAGCCGCACGAAGGCGCGGCAGGTACg > 2:6818026/1‑140 (MQ=255)
caAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCAt > 1:6818035/1‑150 (MQ=255)
aaGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCTATGCCAATATCATGGATGCGCCggc > 2:6818037/1‑105 (MQ=255)
aaGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCAtt < 1:6817469/150‑1 (MQ=255)
agagTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCAttt < 2:6817500/150‑1 (MQ=255)
gagTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTa < 2:6817751/150‑1 (MQ=255)
agTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTa > 2:6818047/1‑149 (MQ=255)
agTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTa < 2:6817431/149‑1 (MQ=255)
aTTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGc > 1:6818052/1‑150 (MQ=255)
agaGTCTTGTGAAACCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGga < 2:6816747/94‑1 (MQ=255)
aCAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCggg < 1:6817652/149‑1 (MQ=255)
aCAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGt > 2:6818059/1‑150 (MQ=255)
aGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTa < 1:6817358/150‑1 (MQ=255)
aGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTa < 1:6817437/150‑1 (MQ=255)
gTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTAt < 1:6817616/150‑1 (MQ=255)
gTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATACCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTAt < 1:6817396/150‑1 (MQ=255)
tCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCg > 2:6818065/1‑143 (MQ=255)
tCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTAtt < 1:6817739/150‑1 (MQ=255)
tCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTAtt < 2:6817700/150‑1 (MQ=255)
cTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTg > 1:6818068/1‑150 (MQ=255)
gtgAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAGCCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTg < 2:6817539/147‑1 (MQ=255)
gtgAAATCGCCATTCAGCATTGACAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCAGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCgg > 2:6818074/1‑140 (MQ=255)
tgAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTc < 1:6817216/149‑1 (MQ=255)
tgAAAGCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTgg < 1:6817180/147‑1 (MQ=255)
aTCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCt > 1:6818087/1‑149 (MQ=255)
aTCGCCATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCt > 2:6818084/1‑149 (MQ=255)
gcgaTTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGCTGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAgcagca < 2:6817281/119‑1 (MQ=255)
ccATTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAaca > 2:6818095/1‑150 (MQ=255)
aTTCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAacac > 1:6818102/1‑149 (MQ=255)
ttCAGCGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAacac > 2:6818106/1‑148 (MQ=255)
aGCGTTGTCAGCAGCGACTGGAGCATGACGAACGGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCt < 2:6817069/106‑1 (MQ=255)
cGTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAata < 1:6817290/55‑1 (MQ=255)
gTTGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGcaca > 2:6818113/1‑150 (MQ=255)
ttGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTc < 2:6817368/131‑1 (MQ=255)
gtGTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGAGGCCAATATCATGGATGCGCCgg < 2:6817173/67‑1 (MQ=255)
gTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACAcc < 1:6817712/149‑1 (MQ=255)
gTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACAcc < 1:6817263/149‑1 (MQ=255)
gTCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACAcc < 1:6817519/149‑1 (MQ=255)
tCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCAt > 1:6818122/1‑150 (MQ=255)
tCAGCAGCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCAt < 2:6817523/150‑1 (MQ=255)
cagcagCGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCCtt > 2:6818124/1‑150 (MQ=255)
cagcGACTGGAGCATGACGAACCGGGTAGTTCTGGCGGTGCCAATGTCATGGATgcgcag > 2:6818134/1‑58 (MQ=255)
cagcGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTtcg > 1:6818134/1‑150 (MQ=255)
cGACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGNAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTtcgtcg < 1:6817845/150‑1 (MQ=255)
gACTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTTCGTCGa > 2:6818144/1‑150 (MQ=255)
aCTGTAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTTCGTCGat > 1:6818153/1‑150 (MQ=255)
aCTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGNTATTGGTCATATGAACACCATGCACACCATTTCGTCGat > 2:6818152/1‑150 (MQ=255)
cTGGAGCATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTTCGTCGatg < 1:6817902/150‑1 (MQ=255)
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TGGGTAACGCACAGCCAGTTTATTGTTGAGCATATTAATGCCATGACCACGCTGGCGCGGGAACACCGGGCATTGCCACCTGAACTGGCACAAGAGTATTTACAGTCTTGTGAAATCGCCATTCAGCGTTGTCAGCAGCGACTGGAGTATGACGAACCGGGTAGTTCTGGCGATGCCAATATCATGGATGCGCCGGAGATGCAGCCGCACGAAGGCGCGGCAGGTACGCTGGAGCAGCATTTACAGCGGGTTATTGGTCATCTGAACACCATGCACACCATTTCGTCGATGGC > NC_000913/3488537‑3488829
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
