Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F13 I1 R1
|
15 |
2083.3 |
68373553 |
99.6% |
68100058 |
141.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,034,793 |
C→T |
H514Y (CAC→TAC) |
hyaB → |
hydrogenase 1 large subunit |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,034,793 | 0 | C | T | 99.5%
| 7970.0
/ 6.9
| 1843 | H514Y (CAC→TAC) | hyaB | hydrogenase 1 large subunit |
| Reads supporting (aligned to +/- strand): ref base C (4/6); new base T (913/916); total (920/923) |
| Fisher's exact test for biased strand distribution p-value = 7.53e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 1844 total aligned reads displayed.
AGTTGCAGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGATCCCCGAGCAACC > NC_000913/1034647‑1034941
|
gTTGCAGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTg > 1:7591886/1‑150 (MQ=255)
cAGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGgcc > 2:7591910/1‑150 (MQ=255)
aGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGgccg > 1:7591921/1‑150 (MQ=255)
aGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGgccg < 1:7589973/150‑1 (MQ=255)
tttCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCAt > 1:7591957/1‑150 (MQ=255)
cttcGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTc < 1:7590475/149‑1 (MQ=255)
cttcGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTc > 1:7591987/1‑149 (MQ=255)
cGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGa > 2:7592008/1‑150 (MQ=255)
aCAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATg > 1:7592025/1‑150 (MQ=255)
aaGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGc < 1:7591237/150‑1 (MQ=255)
aaGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCAACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATgg > 2:7592056/1‑149 (MQ=255)
aGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGc > 1:7592067/1‑149 (MQ=255)
gatgaCCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGAt > 1:7592102/1‑150 (MQ=255)
atgaCCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGGGGGGGGCGTTAGGCTACTg > 2:7592114/1‑125 (MQ=255)
atgaCCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGa < 1:7590620/148‑1 (MQ=255)
cAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGAtct < 2:7590126/150‑1 (MQ=255)
aaCCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGAtctc > 1:7592143/1‑150 (MQ=255)
ggAAAAACGGCAATCTCGCCACGGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTa < 2:7591247/147‑1 (MQ=255)
gAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTAc > 2:7592174/1‑148 (MQ=255)
aaaaaCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATGGATCTCTACCa > 1:7592184/1‑149 (MQ=255)
aaaaCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGt < 1:7590541/150‑1 (MQ=255)
aaCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGc > 1:7592216/1‑150 (MQ=255)
aCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCg < 2:7589811/150‑1 (MQ=255)
aCGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGACGGCAAg > 2:7592227/1‑131 (MQ=255)
aaTCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTCGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgtgctg > 2:7592260/1‑150 (MQ=255)
aaTCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgtggtg > 1:7592259/1‑150 (MQ=255)
aaTCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgtggtg < 1:7590178/150‑1 (MQ=255)
aTCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGc < 2:7590768/150‑1 (MQ=255)
tcGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGCTTGATCTCTACCAGTGCGTGGTGCCGa > 2:7592293/1‑150 (MQ=255)
gCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGcc < 2:7590424/146‑1 (MQ=255)
gCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGcc < 2:7591146/146‑1 (MQ=255)
gCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGacc < 1:7589406/150‑1 (MQ=255)
gCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGac > 1:7592305/1‑149 (MQ=255)
cACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGGCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGGGcc > 2:7592332/1‑144 (MQ=255)
cACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGaccac < 1:7590354/150‑1 (MQ=255)
aCTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGaccac > 1:7592341/1‑149 (MQ=255)
cTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCgtggt < 2:7589951/139‑1 (MQ=255)
cTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTg < 1:7590670/148‑1 (MQ=255)
cTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGa < 1:7589891/150‑1 (MQ=255)
ttCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGaa > 2:7592369/1‑150 (MQ=255)
ccACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAAc < 1:7590930/149‑1 (MQ=255)
ccACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACg > 1:7592390/1‑150 (MQ=255)
cACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGc < 1:7591456/150‑1 (MQ=255)
aCGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGaa > 2:7592406/1‑146 (MQ=255)
caaaaTGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCGAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGcc < 1:7590289/149‑1 (MQ=255)
aaaaTGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGccc > 1:7592435/1‑150 (MQ=255)
aaaaTGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGccc < 2:7590600/150‑1 (MQ=255)
aaaaTGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGccc < 1:7590990/150‑1 (MQ=255)
aaaTGGGAACCTGCAACCTGGCCGACAGAGTGGCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGccc > 2:7592450/1‑149 (MQ=255)
aaaTGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCcg < 2:7590949/150‑1 (MQ=255)
aaaTGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCcg < 2:7590710/150‑1 (MQ=255)
tGGGAGCCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGAtctc < 2:7590272/108‑1 (MQ=255)
tGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCcgcgc > 1:7592468/1‑150 (MQ=255)
gAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGAt < 1:7589702/150‑1 (MQ=255)
aaCCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATc > 2:7592489/1‑150 (MQ=255)
aaCCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATc < 1:7591610/150‑1 (MQ=255)
cTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTCGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGac > 1:7592520/1‑121 (MQ=255)
cTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGGGCGGGGTGCCGACCACCTGGAACGCCAg > 2:7592517/1‑136 (MQ=255)
cAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCaa < 1:7590801/148‑1 (MQ=255)
aaCCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGcc > 2:7592554/1‑114 (MQ=255)
aCCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAgg > 1:7592558/1‑149 (MQ=255)
tGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAggg > 1:7592585/1‑147 (MQ=255)
gCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGccg > 2:7592605/1‑146 (MQ=255)
gCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGa < 1:7590083/149‑1 (MQ=255)
gCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGAt < 1:7587655/150‑1 (MQ=255)
gCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTGAGGCTACTGGGCCGCCATTCGCGGTGGCAAGATTGATCTCTACCAGTGCGTGGTGCCg < 2:7590048/109‑1 (MQ=255)
ccGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGAtt < 1:7590740/150‑1 (MQ=255)
gACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTgg > 1:7592626/1‑150 (MQ=255)
gACAGAGTGCCGTGGTGTCGGGTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTgg < 2:7590901/150‑1 (MQ=255)
aCAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCa > 2:7592645/1‑143 (MQ=255)
agagTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGgc > 1:7592660/1‑148 (MQ=255)
agTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTgg < 2:7590642/145‑1 (MQ=255)
agTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCtt < 1:7591202/150‑1 (MQ=255)
gCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGGCCACCTGGAACGCCAGc > 2:7592684/1‑116 (MQ=255)
ccGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGa < 1:7591037/150‑1 (MQ=255)
cGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGaa < 2:7591051/150‑1 (MQ=255)
gtggtgTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAg > 1:7592699/1‑150 (MQ=255)
tgtCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTgg > 2:7592726/1‑135 (MQ=255)
cGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCt > 1:7592737/1‑150 (MQ=255)
gTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCtga < 1:7591100/150‑1 (MQ=255)
ttACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAgcg > 2:7592760/1‑140 (MQ=255)
tACCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCtgatg < 2:7591542/148‑1 (MQ=255)
aCCGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGCGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGCGCAg > 1:7592772/1‑120 (MQ=255)
cGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAacac < 1:7590425/150‑1 (MQ=255)
cGAAGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATGCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGccc < 2:7589113/99‑1 (MQ=255)
aGCGCCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCa > 1:7592799/1‑149 (MQ=255)
gcgcCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTgg < 2:7589542/119‑1 (MQ=255)
gcgcCGCGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCaaa < 1:7591326/150‑1 (MQ=255)
cgccgcGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCaaaa > 2:7592804/1‑150 (MQ=255)
ccgcGCGGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATg < 2:7590375/150‑1 (MQ=255)
cgcgcgGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGTTTATGAAGCGGCGCTAATAAAAAAAAAAATgg < 2:7590817/150‑1 (MQ=255)
cgcgcgGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATgg < 2:7590190/150‑1 (MQ=255)
cgcgGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGc > 1:7592831/1‑149 (MQ=255)
cgGGGCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGAt > 2:7592845/1‑150 (MQ=255)
ggCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGATccc < 2:7590527/150‑1 (MQ=255)
ggCGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGATccc < 1:7590872/150‑1 (MQ=255)
cGTTAGGCTACTGGGCCGCCATTCGCGGTGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGATcccc < 2:7591717/149‑1 (MQ=255)
cGTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCTACCACCTGGAACGCCAGCCCGCGCGATCCCCAAGGGCa > 2:7592871/1‑100 (MQ=255)
gTTAGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGATcccc > 1:7592879/1‑148 (MQ=255)
aGGCTACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGATCCCCGAGc < 2:7591386/149‑1 (MQ=255)
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AGTTGCAGTATTTCTTCGACAAGCTGATGACCAACCTGAAAAACGGCAATCTCGCCACTGCTTCCACGGAAAAATGGGAACCTGCAACCTGGCCGACAGAGTGCCGTGGTGTCGGTTTTACCGAAGCGCCGCGCGGGGCGTTAGGCCACTGGGCCGCCATTCGCGATGGCAAGATTGATCTCTACCAGTGCGTGGTGCCGACCACCTGGAACGCCAGCCCGCGCGATCCCAAAGGGCAGATTGGCGCTTATGAAGCGGCGCTGATGAACACCAAAATGGCGATCCCCGAGCAACC > NC_000913/1034647‑1034941
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
