Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F13 I1 R1
|
17 |
935.6 |
30504812 |
99.2% |
30260773 |
142.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,590,867 |
T→C |
Y437C (TAC→TGC) |
hipA ← |
serine/threonine kinase HipA |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,590,867 | 0 | T | C | 100.0%
| 3050.7
/ NA
| 736 | Y437C (TAC→TGC) | hipA | serine/threonine kinase HipA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (403/333); total (403/333) |
Only 100 of 736 total aligned reads displayed.
AGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGTATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAGGATTTCATG > NC_000913/1590721‑1591012
|
gAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATtc > 1:4991380/1‑150 (MQ=255)
aaaGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATtctc < 1:4990835/150‑1 (MQ=255)
aaGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCg > 1:4991392/1‑150 (MQ=255)
aaGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCg < 1:4990795/150‑1 (MQ=255)
gCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGc > 2:4991393/1‑150 (MQ=255)
cTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTa < 1:4990491/150‑1 (MQ=255)
ttCGCATCACTCAGCCATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTCGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTaa > 2:4991406/1‑150 (MQ=255)
tCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAAc > 1:4991409/1‑150 (MQ=255)
aTCACGCAGACATGATTTAACATGATATACATTATGCGCACCAATATGAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGt < 2:4991112/149‑1 (MQ=255)
tCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTc > 2:4991422/1‑149 (MQ=255)
tCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTc > 1:4991421/1‑149 (MQ=255)
aCTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCAt < 1:4990904/150‑1 (MQ=255)
aCTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCAt < 1:4990045/150‑1 (MQ=255)
cTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATg < 2:4990437/150‑1 (MQ=255)
tCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATg < 1:4990637/149‑1 (MQ=255)
cAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGc > 2:4991443/1‑149 (MQ=255)
aGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGc < 1:4990604/148‑1 (MQ=255)
gACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAAc < 1:4991446/150‑1 (MQ=255)
cATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCt > 2:4991456/1‑150 (MQ=255)
aTGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTc < 1:4990961/150‑1 (MQ=255)
gATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCaa > 1:4991464/1‑150 (MQ=255)
aTTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCaa < 1:4990939/149‑1 (MQ=255)
tttAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAaca > 2:4991471/1‑150 (MQ=255)
tAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAAcaca > 1:4991479/1‑150 (MQ=255)
aaCATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACAt > 2:4991486/1‑150 (MQ=255)
cATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTg < 2:4990959/150‑1 (MQ=255)
ataataTACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGc > 1:4991500/1‑150 (MQ=255)
ataataTACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGc > 2:4991498/1‑150 (MQ=255)
ataataTACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGc < 1:4990917/150‑1 (MQ=255)
aataTACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCtt > 1:4991512/1‑150 (MQ=255)
aataTACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCtt > 2:4991514/1‑150 (MQ=255)
tataCATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTc < 2:4990667/150‑1 (MQ=255)
taCATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTa < 2:4990532/117‑1 (MQ=255)
taCATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCa < 1:4990563/149‑1 (MQ=255)
taCATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCa < 2:4990585/149‑1 (MQ=255)
taCATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCa < 1:4991232/149‑1 (MQ=255)
cATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACt > 1:4991529/1‑150 (MQ=255)
aTTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTg < 1:4991337/150‑1 (MQ=255)
ttATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGc > 2:4991534/1‑150 (MQ=255)
gcgcACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCg < 2:4990761/148‑1 (MQ=255)
gcACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTcac > 1:4991542/1‑150 (MQ=255)
cACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTcac > 1:4991551/1‑149 (MQ=255)
ccAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTcaccac > 2:4991553/1‑150 (MQ=255)
ccAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTcaccac < 2:4991044/150‑1 (MQ=255)
aaTATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGt > 1:4991563/1‑150 (MQ=255)
ataAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTtct > 2:4991569/1‑150 (MQ=255)
aaaCCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGCCCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTcc > 1:4991580/1‑150 (MQ=255)
aaCCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTtctc < 2:4990793/148‑1 (MQ=255)
ccAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCtt < 2:4990995/123‑1 (MQ=255)
cAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGa > 2:4991588/1‑149 (MQ=255)
aaGGAAGAATCCAGTGGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCACATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACNTTCTCCGGaaa < 1:4990869/150‑1 (MQ=255)
aaGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGaa > 2:4991599/1‑149 (MQ=255)
aGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGaaaa > 1:4991602/1‑150 (MQ=255)
gaagaaTCCAGTCGTTGGCGGTCATGCTTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTc < 2:4990925/120‑1 (MQ=255)
gaaTCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGcc > 2:4991613/1‑124 (MQ=255)
aaTCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACTAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTc < 1:4991032/150‑1 (MQ=255)
aTCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCg < 1:4990733/150‑1 (MQ=255)
aTCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCg > 1:4991617/1‑150 (MQ=255)
cAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGt < 2:4991074/149‑1 (MQ=255)
cAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGt < 1:4991015/149‑1 (MQ=255)
cAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGt > 1:4991625/1‑149 (MQ=255)
aGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTaa > 2:4991631/1‑150 (MQ=255)
tCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAAt > 1:4991640/1‑149 (MQ=255)
gTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGa < 1:4990992/149‑1 (MQ=255)
ttGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAg > 2:4991651/1‑150 (MQ=255)
ggCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTc > 1:4991656/1‑150 (MQ=255)
cGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCt > 2:4991660/1‑149 (MQ=255)
ggTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAacac < 2:4990873/92‑1 (MQ=255)
aTGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGt > 1:4991671/1‑150 (MQ=255)
tGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGt > 2:4991676/1‑149 (MQ=255)
aTTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTAt > 1:4991683/1‑150 (MQ=255)
aTGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGtg > 2:4991693/1‑150 (MQ=255)
gCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGtgc > 1:4991699/1‑149 (MQ=255)
cTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGtgct < 1:4991162/149‑1 (MQ=255)
tCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGtgctgc > 2:4991704/1‑150 (MQ=255)
tCATTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGtgctg < 2:4990847/149‑1 (MQ=255)
aTTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTgctgct < 1:4990399/149‑1 (MQ=255)
aTTAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTgctgct < 1:4991432/149‑1 (MQ=255)
tAACAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTgg > 1:4991712/1‑149 (MQ=255)
cAATGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTATTCACGTTATCCAGTGCTGCTGGAAt > 2:4991718/1‑149 (MQ=255)
aTGACCAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGt < 2:4990717/136‑1 (MQ=255)
tGACCAAAGCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCAtt > 1:4991727/1‑150 (MQ=255)
ccAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTACCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCt < 2:4991149/149‑1 (MQ=255)
cAAACCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTgctgct < 2:4991208/137‑1 (MQ=255)
aaaCCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAAt < 2:4990980/141‑1 (MQ=255)
aaCCCCATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCa < 1:4991075/150‑1 (MQ=255)
cccgATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTAACGTTATCCAGTGCTGCTGGAATCATTGTGGCa > 2:4991740/1‑148 (MQ=255)
ccccATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCa > 1:4991739/1‑148 (MQ=255)
cccATATCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTg < 2:4991020/144‑1 (MQ=255)
tatCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCTGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCAc > 2:4991756/1‑150 (MQ=255)
tatCTCACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCAc > 1:4991753/1‑150 (MQ=255)
tctcACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACt > 2:4991765/1‑149 (MQ=255)
cACTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAg > 1:4991774/1‑149 (MQ=255)
aCTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAgg < 2:4991324/149‑1 (MQ=255)
cTTACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCa > 2:4991783/1‑113 (MQ=255)
ttACTACCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAGGAtt > 1:4991784/1‑150 (MQ=255)
actacCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAGGAttt < 1:4991062/149‑1 (MQ=255)
ctacCGCAATCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAGGATTTCa > 1:4991795/1‑150 (MQ=255)
tacCGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCTGTAATGAAGTCTTCACGTTATCCa < 2:4990891/108‑1 (MQ=255)
ccGCATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAGGATTTCAt < 1:4991120/148‑1 (MQ=255)
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AGAAAAGCACTTCGCATCACTCAGACATGATTTAACATAATATACATTATGCGCACCAATATAAACCAAGGAAGAATCCAGTCGTTGGCGGTCATGATTGTCATGCTCATTAACAATGACCAAACCCCATATCTCACTTACTACCGTATTCTCGGCTTAACCGTCCATGCAACCTCAACACATTGCTTTCAACTGCCGTCACCACGTTCTCCGGAAAATCTGTCGGTAATGAAGTCTTCACGTTATCCAGTGCTGCTGGAATCATTCTGGCAAAGTCACTCAGGATTTCATG > NC_000913/1590721‑1591012
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
