Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F13 I1 R1
|
20 |
580.9 |
19806870 |
98.8% |
19569187 |
140.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,533,333 |
A→G |
T309A (ACC→GCC) |
cysK → |
O‑acetylserine sulfhydrylase A |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,533,333 | 0 | A | G | 99.8%
| 2251.3
/ ‑4.0
| 537 | T309A (ACC→GCC) | cysK | O‑acetylserine sulfhydrylase A |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (252/283); total (254/283) |
| Fisher's exact test for biased strand distribution p-value = 4.72e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.69e-01 |
Only 100 of 537 total aligned reads displayed.
CGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCACCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTGGCATTGATTCAGCCTGTCG > NC_000913/2533186‑2533479
|
cgtcgtCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGcc < 1:5218159/150‑1 (MQ=255)
gtcgtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACACGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCg > 2:5218971/1‑150 (MQ=255)
gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCa < 1:5218666/149‑1 (MQ=255)
gtcTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCAt > 1:5218977/1‑150 (MQ=255)
tGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGt > 2:5218982/1‑150 (MQ=255)
aTGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGttt > 1:5218991/1‑150 (MQ=255)
aTGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGttt < 2:5218638/150‑1 (MQ=255)
aTGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGtt < 2:5218371/149‑1 (MQ=255)
aTGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGt < 1:5218438/148‑1 (MQ=255)
gaagaagaaGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGcc < 1:5217846/150‑1 (MQ=255)
gaagaagaaGGTATTCTTGCAGGTATCTCGTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGc < 1:5218322/149‑1 (MQ=255)
aagaagaagGTATTCTTGCAGTTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGc < 1:5218393/148‑1 (MQ=255)
aagaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGAtc < 1:5218589/150‑1 (MQ=255)
agaagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTg > 2:5219006/1‑143 (MQ=255)
aagGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATctct > 1:5219013/1‑150 (MQ=255)
aTTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACt > 2:5219016/1‑150 (MQ=255)
ttCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACt < 1:5219004/149‑1 (MQ=255)
tGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTgcg > 2:5219027/1‑146 (MQ=255)
gCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTgaga < 1:5218618/148‑1 (MQ=255)
cAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTgaga > 1:5219033/1‑147 (MQ=255)
cAGATATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGNTGAAATCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGagaaa < 2:5218601/149‑1 (MQ=255)
ggTATCTCTGCTGGAGCAGCAGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAATAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGAGCTCTTCAc > 2:5219036/1‑140 (MQ=255)
gTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAAt < 2:5218399/150‑1 (MQ=255)
ctctTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGc > 1:5219045/1‑149 (MQ=255)
ttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCaa > 1:5219055/1‑148 (MQ=255)
ttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCa < 1:5218454/147‑1 (MQ=255)
ttctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCa < 1:5218681/147‑1 (MQ=255)
ctGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACa < 2:5218785/148‑1 (MQ=255)
agcagcTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATg < 2:5218555/150‑1 (MQ=255)
cagcTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATg > 2:5219060/1‑148 (MQ=255)
agcTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGc > 1:5219066/1‑148 (MQ=255)
agcTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCa < 1:5218791/150‑1 (MQ=255)
gcTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAg < 1:5218528/150‑1 (MQ=255)
ttGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCt < 2:5218439/148‑1 (MQ=255)
ttGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCt < 2:5218716/148‑1 (MQ=255)
gCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGt > 2:5219069/1‑149 (MQ=255)
ccGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGtt < 2:5218667/149‑1 (MQ=255)
cggcgTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTaaaa < 1:5218857/150‑1 (MQ=255)
cggcgTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTaaa > 1:5219074/1‑149 (MQ=255)
cggcgTGAAAACTACAAGAAGACGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTg < 2:5218821/144‑1 (MQ=255)
cgTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATg > 1:5219083/1‑150 (MQ=255)
cgTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATg > 2:5219083/1‑150 (MQ=255)
cgTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAAGATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATg < 2:5218323/150‑1 (MQ=255)
gTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGc < 1:5218717/150‑1 (MQ=255)
gTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTGATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCa < 2:5218217/135‑1 (MQ=255)
ttGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCg < 1:5218809/150‑1 (MQ=255)
tGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCg > 1:5219095/1‑149 (MQ=255)
gAAACAACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGt > 2:5219099/1‑149 (MQ=255)
aaaCTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTaa < 1:5218233/150‑1 (MQ=255)
aaaCTACAACAAGATGAAAGATTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTa > 2:5219105/1‑149 (MQ=255)
aaCTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTaa > 1:5219108/1‑149 (MQ=255)
cAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTa < 1:5218751/143‑1 (MQ=255)
cAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAg > 1:5219116/1‑149 (MQ=255)
aagaagATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCa < 1:5218697/150‑1 (MQ=255)
agaagaTGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCAc < 1:5218354/150‑1 (MQ=255)
aagaTGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCAc > 1:5219124/1‑148 (MQ=255)
aagaTGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCt > 2:5219120/1‑150 (MQ=255)
aTGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCtttt < 2:5218994/150‑1 (MQ=255)
gAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCtttt > 2:5219130/1‑148 (MQ=255)
aaaGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTa < 2:5218926/149‑1 (MQ=255)
aaaGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTa < 2:5218464/149‑1 (MQ=255)
aaaGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTa < 1:5218774/149‑1 (MQ=255)
aaaGCTTGACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAg < 2:5218700/150‑1 (MQ=255)
aaGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAgg > 1:5219138/1‑150 (MQ=255)
tttACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCt > 2:5219142/1‑150 (MQ=255)
tACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCttt > 1:5219148/1‑150 (MQ=255)
aCCAACAAGAATATTGTGGTTANTCTACCATCATCGGATGAGCGTTATTTAAGCGCCGCATTCTTTGACGATCTCTTCGCTGATAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAAt < 2:5218505/120‑1 (MQ=255)
ccAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCttttt < 1:5218829/150‑1 (MQ=255)
caacaaGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCtttttt > 1:5219156/1‑150 (MQ=255)
aacaaGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCtt < 2:5218534/134‑1 (MQ=255)
acaaGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTtgt < 1:5218480/150‑1 (MQ=255)
acaaGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTtgt > 2:5219157/1‑150 (MQ=255)
gAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGcc > 1:5219168/1‑150 (MQ=255)
aaTATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGcc > 2:5219173/1‑149 (MQ=255)
aaTATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCt > 1:5219174/1‑150 (MQ=255)
gtgGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGt < 1:5218733/109‑1 (MQ=255)
tgGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCa < 2:5218777/149‑1 (MQ=255)
gTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTgg > 2:5219179/1‑138 (MQ=255)
ttATTCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACt < 1:5218598/150‑1 (MQ=255)
ttCTACCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTc > 1:5219188/1‑150 (MQ=255)
aCCATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGccc > 2:5219192/1‑150 (MQ=255)
ccATCATCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGccc < 1:5218901/149‑1 (MQ=255)
catcatCGTGTGAGCGTTATTTACGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCcct < 1:5218644/150‑1 (MQ=255)
catcatCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCcct > 1:5219199/1‑150 (MQ=255)
catcatCGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACGGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGt < 2:5218584/96‑1 (MQ=255)
atcatcGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCcctc > 2:5219200/1‑150 (MQ=255)
catcGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCg > 2:5219208/1‑142 (MQ=255)
atcGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAAATGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCttt < 2:5218266/106‑1 (MQ=255)
tcGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTgg < 1:5218568/150‑1 (MQ=255)
cGGGTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTgg < 2:5218868/149‑1 (MQ=255)
gggTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTGGc < 1:5218504/149‑1 (MQ=255)
gggTGAGCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTGGCa > 1:5219214/1‑150 (MQ=255)
tGAGCGTTATTTAAGCGCCGCAATGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACttt < 2:5218741/133‑1 (MQ=255)
gCGTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTGGCATTGAtt > 1:5219221/1‑150 (MQ=255)
gCGTTATTTAAGCGACGCATTGTTTGCCGATCTCTTCa > 2:5219222/1‑38 (MQ=255)
gTTATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTGGCATTGATTCa < 2:5218648/150‑1 (MQ=255)
tATTTAAGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTGGCCTTGATTCAGc > 1:5219233/1‑150 (MQ=255)
tATTTAAGCGCCGAATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAAc > 2:5219232/1‑123 (MQ=255)
aaGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTGGCATTGATTCAGCCTGt < 1:5219021/149‑1 (MQ=255)
aGCGCCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTGGCATTGATTCAGCCTGTCg < 2:5219050/150‑1 (MQ=255)
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CGTCGTCTGATGGAAGAAGAAGGTATTCTTGCAGGTATCTCTTCTGGAGCAGCTGTTGCCGCGGCGTTGAAACTACAAGAAGATGAAAGCTTTACCAACAAGAATATTGTGGTTATTCTACCATCATCGGGTGAGCGTTATTTAAGCACCGCATTGTTTGCCGATCTCTTCACTGAGAAAGAATTGCAACAGTAATGCCAGCTTGTTAAAAATGCGTAAAAAAGCACCTTTTTAGGTGCTTTTTTGTGGCCTGCTTCAAACTTTCGCCCCTCCTGGCATTGATTCAGCCTGTCG > NC_000913/2533186‑2533479
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
