Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F13 I1 R1
|
116 |
362.0 |
17214306 |
99.7% |
17162663 |
98.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,859,878 |
(T)6→5 |
coding (119/657 nt) |
pphB → |
phosphoprotein phosphatase 2 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,859,873 | 0 | T | . | 98.4%
| 1551.0
/ 16.1
| 303 | coding (114/657 nt) | pphB | phosphoprotein phosphatase 2 |
| Reads supporting (aligned to +/- strand): ref base T (3/2); new base . (190/108); total (193/110) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 321 total aligned reads displayed.
GCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGG > NC_000913/2859773‑2859969
|
cTATCAAAAAATCAATGCCCATAACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCtt > 2:5159930/1‑101 (MQ=255)
aTCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCtttt < 1:5158905/101‑1 (MQ=255)
aTCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCtttt > 1:5159933/1‑101 (MQ=255)
tCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCttttt < 2:5159508/101‑1 (MQ=255)
aaaTCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTcccca > 2:5159937/1‑100 (MQ=255)
aTCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCaaa < 2:5159574/101‑1 (MQ=255)
aTCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCaaa > 2:5159940/1‑101 (MQ=255)
cAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAAt < 2:5159207/101‑1 (MQ=255)
cAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAAt < 2:5159486/101‑1 (MQ=255)
cAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAAt > 2:5159944/1‑101 (MQ=255)
aTGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCg < 2:5159458/101‑1 (MQ=255)
gCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGac > 2:5159948/1‑101 (MQ=255)
cccATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGact > 1:5159949/1‑101 (MQ=255)
ccATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGactt < 1:5159467/101‑1 (MQ=255)
cATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGactta > 2:5159953/1‑101 (MQ=255)
cATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGactta < 2:5159275/101‑1 (MQ=255)
cACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGacttactt > 2:5159958/1‑101 (MQ=255)
aCTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGActtactta > 1:5159962/1‑101 (MQ=255)
aCTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGActtactta > 2:5159961/1‑101 (MQ=255)
cTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTAt < 2:5159693/101‑1 (MQ=255)
cTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTAt > 2:5159967/1‑101 (MQ=255)
aTCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTAttt > 1:5159973/1‑101 (MQ=255)
aTCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTAttt < 2:5159847/101‑1 (MQ=255)
aTCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTAttt > 2:5159972/1‑101 (MQ=255)
cGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCt > 2:5159977/1‑101 (MQ=255)
gCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTg < 1:5159255/101‑1 (MQ=255)
ccATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGt < 1:5159328/101‑1 (MQ=255)
ccATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGt > 1:5159980/1‑101 (MQ=255)
cATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTc < 1:5159566/101‑1 (MQ=255)
cATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTc > 1:5159983/1‑101 (MQ=255)
cATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTc < 2:5159568/101‑1 (MQ=255)
cATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTc > 2:5159985/1‑101 (MQ=255)
atatatGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCg < 2:5159534/101‑1 (MQ=255)
tatatGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCgg > 2:5159989/1‑101 (MQ=255)
tatGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCg > 1:5159993/1‑101 (MQ=255)
atGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGa > 2:5159995/1‑101 (MQ=255)
gggTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGata > 1:5159999/1‑101 (MQ=255)
gggTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGata < 2:5159498/101‑1 (MQ=255)
ggTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGataa > 2:5160001/1‑101 (MQ=255)
gTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGataat < 2:5159423/101‑1 (MQ=255)
gTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGataat > 2:5160005/1‑101 (MQ=255)
gTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATAtt > 1:5160010/1‑101 (MQ=255)
gTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATAtt > 2:5160012/1‑101 (MQ=255)
tGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATAtt > 2:5160016/1‑99 (MQ=255)
ggTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGAt > 1:5160017/1‑101 (MQ=255)
ggTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGAt < 1:5159493/101‑1 (MQ=255)
ggTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGAt < 2:5159405/101‑1 (MQ=255)
gATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGt > 1:5160022/1‑101 (MQ=255)
atatTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTg < 2:5159464/101‑1 (MQ=255)
atatTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTg < 2:5159343/101‑1 (MQ=255)
atatTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTg < 1:5159315/101‑1 (MQ=255)
tatTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTgg < 2:5159560/101‑1 (MQ=255)
atTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGa > 1:5160026/1‑101 (MQ=255)
ttCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGAc < 2:5159727/101‑1 (MQ=255)
tCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGAcc < 1:5159351/101‑1 (MQ=255)
tCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGAcc > 2:5160028/1‑101 (MQ=255)
cATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCg < 2:5159515/101‑1 (MQ=255)
aTGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCgg < 2:5159550/101‑1 (MQ=255)
aTGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCgg > 1:5160033/1‑101 (MQ=255)
aTGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCgg > 2:5160034/1‑101 (MQ=255)
ggTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGgag > 2:5160037/1‑101 (MQ=255)
tGAATATCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGagag > 2:5160042/1‑101 (MQ=255)
atatCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCt < 2:5159450/101‑1 (MQ=255)
atatCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCt > 1:5160045/1‑101 (MQ=255)
atatCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCt > 2:5160046/1‑101 (MQ=255)
atCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGagag > 1:5160055/1‑96 (MQ=255)
atCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTg > 2:5160051/1‑101 (MQ=255)
atCAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTg < 1:5159649/101‑1 (MQ=255)
cAGTTATTACAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGACTTGAc > 2:5160056/1‑101 (MQ=255)
ttattaCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTc > 2:5160061/1‑101 (MQ=255)
ttattaCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTc > 1:5160062/1‑101 (MQ=255)
tattaCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTcc < 1:5159522/101‑1 (MQ=255)
tattaCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTcc < 1:5159792/101‑1 (MQ=255)
tattaCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTcc > 2:5160065/1‑101 (MQ=255)
tattaCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTcc < 2:5159521/101‑1 (MQ=255)
attaCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCt < 2:5159588/101‑1 (MQ=255)
attaCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCt < 2:5159319/101‑1 (MQ=255)
ttaAAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTg > 2:5160070/1‑101 (MQ=255)
taCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTgc > 1:5160072/1‑101 (MQ=255)
aCAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTgcg > 2:5160076/1‑101 (MQ=255)
cAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGActtcctta < 2:5159397/48‑1 (MQ=255)
cAATCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTgcgc > 2:5160079/1‑101 (MQ=255)
aaTCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGcc > 1:5160082/1‑101 (MQ=255)
aTCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCg > 2:5160087/1‑55 (MQ=255)
aTCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTg < 2:5159619/88‑1 (MQ=255)
tCCCGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGcc > 1:5160088/1‑99 (MQ=255)
ccGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCt > 2:5160093/1‑101 (MQ=255)
cGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTa > 2:5160096/1‑101 (MQ=255)
cGCTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTa > 1:5160098/1‑101 (MQ=255)
cTTACATCAACTCTC‑TTTTTCCCCAAAATCGacttac < 1:5159427/37‑1 (MQ=38)
cTTACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTaaa > 1:5160103/1‑101 (MQ=255)
ttACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaac > 1:5160108/1‑101 (MQ=255)
ttACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaac > 2:5160104/1‑101 (MQ=255)
tACATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaacc > 2:5160111/1‑101 (MQ=255)
cATCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaaccaa > 1:5160116/1‑101 (MQ=255)
aTCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaaccaac > 1:5160122/1‑101 (MQ=255)
aTCAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAaaccaac > 2:5160117/1‑101 (MQ=255)
cAACTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAAccc > 1:5160125/1‑101 (MQ=255)
aaCTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCt > 2:5160128/1‑101 (MQ=255)
aCTCTC‑TTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTg > 1:5160131/1‑101 (MQ=255)
|
GCTATCAAAAAATCAATGCCCATCACTATCGCCATATATGGGTCGTTGGTGATATTCATGGTGAATATCAGTTATTACAATCCCGCTTACATCAACTCTCTTTTTTCCCCAAAATCGACTTACTTATTTCTGTCGGCGATAATATTGATCGTGGACCGGAGAGTCTTGACGTCCTGCGCCTGCTAAACCAACCCTGG > NC_000913/2859773‑2859969
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
