Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F13 I1 R1 108 324.7 15372274 99.7% 15326157 98.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,285,709 T→C V445A (GTG→GCG)  yejM → putative cardiolipin transport protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,285,7090TC100.0% 1176.4 / NA 282V445A (GTG→GCG) yejMputative cardiolipin transport protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (148/134);  total (148/134)

Only 100 of 293 total aligned reads displayed.

TGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGG  >  NC_000913/2285611‑2285806
                                                                                                  |                                                                                                 
tGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGa                                                                                                 >  2:3725652/1‑101 (MQ=255)
tGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGa                                                                                                 >  1:3725650/1‑101 (MQ=255)
     ggAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATc                                                                                            >  2:3725657/1‑101 (MQ=255)
      gAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCa                                                                                           >  1:3725658/1‑101 (MQ=255)
       aaaTATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCAc                                                                                          <  1:3725139/101‑1 (MQ=255)
       aaaTATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCAc                                                                                          >  1:3725662/1‑101 (MQ=255)
          tataGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGc                                                                                       <  2:3725191/101‑1 (MQ=255)
          tataGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGc                                                                                       >  2:3725666/1‑101 (MQ=255)
           ataGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGcc                                                                                      <  2:3725313/101‑1 (MQ=255)
           ataGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGcc                                                                                      >  1:3725667/1‑101 (MQ=255)
             aGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCgg                                                                                    <  1:3725270/101‑1 (MQ=255)
              gCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTg                                                                                        <  2:3725282/96‑1 (MQ=255)
               ccGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTc                                                                                  <  2:3725178/101‑1 (MQ=255)
                cGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCg                                                                                 >  2:3725671/1‑101 (MQ=255)
                 gggCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCgg                                                                                >  1:3725673/1‑101 (MQ=255)
                   gcggcAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCgggg                                                                              <  2:3724829/101‑1 (MQ=255)
                   gcggcAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCgggg                                                                              >  2:3725677/1‑101 (MQ=255)
                      gcaggcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCgggg                                                                              <  1:3725239/98‑1 (MQ=255)
                      gcaggcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTAt                                                                           <  1:3725416/101‑1 (MQ=255)
                      gcaggcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTAt                                                                           <  1:3725102/101‑1 (MQ=255)
                      gcaggcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTAt                                                                           >  1:3725681/1‑101 (MQ=255)
                       caggcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTAtt                                                                          <  2:3725223/101‑1 (MQ=255)
                       caggcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTAtt                                                                          <  1:3724890/101‑1 (MQ=255)
                       caggcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTAtt                                                                          >  2:3725682/1‑101 (MQ=255)
                          gcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCa                                                                       <  1:3725403/101‑1 (MQ=255)
                          gcaATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCa                                                                       >  2:3725687/1‑101 (MQ=255)
                           caATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCAc                                                                      >  2:3725690/1‑101 (MQ=255)
                           caATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCAc                                                                      >  1:3725691/1‑101 (MQ=255)
                            aaTGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACt                                                                     <  2:3725605/101‑1 (MQ=255)
                             aTGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTg                                                                    >  2:3725694/1‑101 (MQ=255)
                             aTGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTg                                                                    <  2:3725327/101‑1 (MQ=255)
                                tCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGc                                                                 >  1:3725699/1‑101 (MQ=255)
                                tCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGc                                                                 <  2:3725112/101‑1 (MQ=255)
                                 cGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCg                                                                >  1:3725702/1‑101 (MQ=255)
                                   aTGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGaa                                                              >  2:3725705/1‑101 (MQ=255)
                                   aTGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGaa                                                              <  2:3725081/101‑1 (MQ=255)
                                   aTGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATGCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGaa                                                              >  1:3725704/1‑101 (MQ=255)
                                    tGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAag                                                             <  1:3725189/101‑1 (MQ=255)
                                    tGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAag                                                             >  2:3725708/1‑101 (MQ=255)
                                     gACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAaga                                                            >  2:3725711/1‑101 (MQ=255)
                                      aCCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAagag                                                           <  2:3725208/101‑1 (MQ=255)
                                       ccAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGc                                                                 >  1:3725714/1‑94 (MQ=255)
                                        cAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAagag                                                           <  2:3724973/99‑1 (MQ=255)
                                        cAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGga                                                         <  1:3725172/101‑1 (MQ=255)
                                        cAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGga                                                         <  2:3725240/101‑1 (MQ=255)
                                         aGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTa                                                                            >  1:3725717/1‑81 (MQ=255)
                                         aGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGgaa                                                        <  1:3725217/101‑1 (MQ=255)
                                          gATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGgaag                                                       <  1:3725257/101‑1 (MQ=255)
                                           aTCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGgaaga                                                      >  1:3725721/1‑101 (MQ=255)
                                             cAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGaaa                                                    >  2:3725723/1‑101 (MQ=255)
                                              aaCCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAAc                                                   <  2:3725099/101‑1 (MQ=255)
                                               aCCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAAcc                                                  >  1:3725729/1‑101 (MQ=255)
                                               aCCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAAcc                                                  >  2:3725728/1‑101 (MQ=255)
                                                ccGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCt                                                 <  1:3725361/101‑1 (MQ=255)
                                                 cgcgTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCtt                                                <  2:3725148/101‑1 (MQ=255)
                                                  gcgTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCttt                                               >  1:3725734/1‑101 (MQ=255)
                                                  gcgTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGA‑‑GAAGAGGAAGAAACCTTTGa                                             <  2:3725142/101‑1 (MQ=255)
                                                    gTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGa                                             >  1:3725737/1‑101 (MQ=255)
                                                    gTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGa                                             <  1:3725429/101‑1 (MQ=255)
                                                    gTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGa                                             <  1:3725224/101‑1 (MQ=255)
                                                     tGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGAc                                            <  2:3725232/101‑1 (MQ=255)
                                                       cTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTg                                          >  2:3725739/1‑101 (MQ=255)
                                                       cTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTg                                          <  1:3725199/101‑1 (MQ=255)
                                                        tCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGTTCGGGGTATTCCACTGAGCGAAGAGGAAGAAAcc                                                  >  1:3725742/1‑92 (MQ=255)
                                                        tCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTgg                                         <  2:3725324/101‑1 (MQ=255)
                                                         cAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGt                                                                             >  1:3725746/1‑64 (MQ=255)
                                                         cAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGt                                        <  2:3725160/101‑1 (MQ=255)
                                                          aaTGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTc                                       >  2:3725748/1‑101 (MQ=255)
                                                           aTGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACt                                           <  2:3725261/96‑1 (MQ=255)
                                                             gCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCa                                    <  2:3725268/101‑1 (MQ=255)
                                                              cACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCAc                                   >  2:3725753/1‑101 (MQ=255)
                                                              cACTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCAc                                   >  1:3725752/1‑101 (MQ=255)
                                                               aCTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACg                                  <  1:3725314/101‑1 (MQ=255)
                                                                cTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACgg                                 <  2:3725457/101‑1 (MQ=255)
                                                                cTGCGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACgg                                 >  1:3725756/1‑101 (MQ=255)
                                                                   cGTGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCa                              >  1:3725761/1‑101 (MQ=255)
                                                                     tGATTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATc                            >  2:3725763/1‑101 (MQ=255)
                                                                       aTTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTg                          <  1:3725456/101‑1 (MQ=255)
                                                                       aTTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTg                          >  1:3725765/1‑101 (MQ=255)
                                                                       aTTCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTg                          <  2:3725342/101‑1 (MQ=255)
                                                                         tCTGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCa                        <  1:3725349/101‑1 (MQ=255)
                                                                           tGGCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAgg                      >  1:3725769/1‑101 (MQ=255)
                                                                            ggCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGt                     >  1:3725771/1‑101 (MQ=255)
                                                                            ggCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGt                     <  1:3725294/101‑1 (MQ=255)
                                                                             gCAAACTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTg                    >  2:3725773/1‑101 (MQ=255)
                                                                               aaaCTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGcc                  >  1:3725777/1‑101 (MQ=255)
                                                                                 aCTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCAt                >  1:3725781/1‑101 (MQ=255)
                                                                                  cTGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCAtt               <  2:3725038/101‑1 (MQ=255)
                                                                                   tGGACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTa              <  2:3725392/101‑1 (MQ=255)
                                                                                    ggACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAg             >  1:3725784/1‑101 (MQ=255)
                                                                                    ggACAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAg             >  2:3725785/1‑101 (MQ=255)
                                                                                       cAATACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGa          >  1:3725790/1‑101 (MQ=255)
                                                                                        aaTACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGAt         <  2:3725251/101‑1 (MQ=255)
                                                                                        aaTACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGAt         >  1:3725793/1‑101 (MQ=255)
                                                                                        aaTACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGAt         >  2:3725794/1‑101 (MQ=255)
                                                                                          tACGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTc       <  1:3724740/101‑1 (MQ=255)
                                                                                           aCGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCa      >  2:3725797/1‑101 (MQ=255)
                                                                                            cGGTGGCGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCAc     <  2:3725020/101‑1 (MQ=255)
                                                                                             ggtggcGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACt    >  2:3725800/1‑101 (MQ=255)
                                                                                               tggcgATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTgg  >  2:3725804/1‑101 (MQ=255)
                                                                                                  |                                                                                                 
TGCACGGAAATATAGCCGGGCGGCAGGCAATGTCGATGACCAGATCAACCGCGTGCTCAATGCACTGCGTGATTCTGGCAAACTGGACAATACGGTGGTGATTATCACTGCCGGTCGGGGTATTCCACTGAGCGAAGAGGAAGAAACCTTTGACTGGTCCCACGGTCATCTGCAGGTGCCATTAGTGATTCACTGG  >  NC_000913/2285611‑2285806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A