Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F13 I1 R1
|
114 |
305.6 |
14428468 |
99.7% |
14385182 |
98.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,613,731 |
T→C |
L611S (TTA→TCA) |
hyfR → |
DNA‑binding transcriptional activator HyfR |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,613,731 | 0 | T | C | 97.8%
| 1096.1
/ 8.7
| 273 | L611S (TTA→TCA) | hyfR | DNA‑binding transcriptional activator HyfR |
| Reads supporting (aligned to +/- strand): ref base T (3/3); new base C (136/131); total (139/134) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.26e-01 |
Only 100 of 274 total aligned reads displayed.
TCGTGGTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTTACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCGTGGCGCA > NC_000913/2613633‑2613831
|
tGGTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTTACTGc > 2:3963908/1‑101 (MQ=255)
tGGTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGc < 2:3963461/101‑1 (MQ=255)
ggTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCa > 1:3963909/1‑101 (MQ=255)
ggTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCa < 1:3963633/101‑1 (MQ=255)
gTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCAc < 1:3963463/101‑1 (MQ=255)
aaCAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCAccc > 1:3963913/1‑101 (MQ=255)
gTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCcgacg > 2:3963917/1‑101 (MQ=255)
tCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCcgacga < 1:3963606/101‑1 (MQ=255)
cTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCgacgac > 1:3963920/1‑101 (MQ=255)
cTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCgacgac < 1:3963493/101‑1 (MQ=255)
gAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGc < 1:3963514/101‑1 (MQ=255)
gAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGc < 2:3963496/101‑1 (MQ=255)
aaTTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCcgacga < 1:3963395/97‑1 (MQ=255)
aaTTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGcc > 2:3963926/1‑101 (MQ=255)
aaTTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGcc > 1:3963924/1‑101 (MQ=255)
aTTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCa > 2:3963928/1‑101 (MQ=255)
tttACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCag > 1:3963931/1‑101 (MQ=255)
tACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCagag > 1:3963935/1‑101 (MQ=255)
aCATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAgaga < 2:3963538/101‑1 (MQ=255)
aCATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAgaga > 2:3963937/1‑101 (MQ=255)
aTCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAAt < 2:3963568/101‑1 (MQ=255)
aTCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAAt > 2:3963940/1‑101 (MQ=255)
tCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATg < 2:3963450/101‑1 (MQ=255)
tCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATg < 1:3963503/101‑1 (MQ=255)
cTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAAt < 2:3963502/99‑1 (MQ=255)
tAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGAc < 2:3963657/101‑1 (MQ=255)
tAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGAc > 1:3963944/1‑101 (MQ=255)
aaTGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACga > 2:3963947/1‑101 (MQ=255)
aTGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaa < 1:3963726/101‑1 (MQ=255)
aTGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaa > 1:3963948/1‑101 (MQ=255)
gTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaaga > 1:3963951/1‑101 (MQ=255)
tCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaa < 2:3963520/101‑1 (MQ=255)
tCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaa < 2:3963555/101‑1 (MQ=255)
tCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaa < 2:3963601/101‑1 (MQ=255)
tCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaa > 2:3963956/1‑101 (MQ=255)
ccGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaag < 2:3963323/101‑1 (MQ=255)
ccGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaag > 2:3963959/1‑101 (MQ=255)
cGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaaga < 1:3963592/101‑1 (MQ=255)
cGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaaga > 1:3963960/1‑101 (MQ=255)
gACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaagaa < 1:3963685/101‑1 (MQ=255)
cAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACg < 1:3963831/101‑1 (MQ=255)
cAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACg > 2:3963965/1‑101 (MQ=255)
cAAAGCCGGTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACg > 1:3963966/1‑101 (MQ=255)
aaaGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGt < 1:3963650/101‑1 (MQ=255)
gCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAAc > 1:3963968/1‑96 (MQ=255)
gCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAg < 1:3963583/101‑1 (MQ=255)
ccGTTTACTGCCGACGCTAAATGAAGATTAAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAgc < 2:3963695/101‑1 (MQ=255)
cGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAgcg > 1:3963972/1‑101 (MQ=255)
gTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAgcgc > 2:3963976/1‑101 (MQ=255)
gTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAgcgc < 2:3963709/101‑1 (MQ=255)
gTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAgcgc < 2:3963559/101‑1 (MQ=255)
gTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAgcgc < 1:3963622/101‑1 (MQ=255)
tttACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACgaagaaga > 2:3963978/1‑90 (MQ=255)
ttACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCAt < 1:3963678/101‑1 (MQ=255)
cTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGt > 2:3963981/1‑101 (MQ=255)
tGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGtt > 1:3963983/1‑101 (MQ=255)
tGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGtt < 2:3963749/101‑1 (MQ=255)
tGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGtt > 2:3963985/1‑101 (MQ=255)
ccGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCa < 1:3963546/101‑1 (MQ=255)
cGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAg < 1:3963440/101‑1 (MQ=255)
aCGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGt > 1:3963991/1‑101 (MQ=255)
aCGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGt > 2:3963990/1‑101 (MQ=255)
cGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTa > 2:3963993/1‑101 (MQ=255)
cGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTa < 2:3963693/101‑1 (MQ=255)
cTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTAtt > 2:3963999/1‑101 (MQ=255)
cTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTAtt < 2:3963575/101‑1 (MQ=255)
cTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTAtt > 1:3963997/1‑101 (MQ=255)
tAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTTACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTg > 2:3964005/1‑101 (MQ=255)
tAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTa < 1:3963528/98‑1 (MQ=255)
tAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTg < 2:3963394/101‑1 (MQ=255)
tAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTg > 1:3964002/1‑101 (MQ=255)
aaaTGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGc < 2:3963672/101‑1 (MQ=255)
aaTGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCg > 1:3964010/1‑101 (MQ=255)
aaTGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCg < 2:3963584/101‑1 (MQ=255)
aaTGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCg > 2:3964009/1‑101 (MQ=255)
aTGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCga > 2:3964012/1‑101 (MQ=255)
aaGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGaa > 1:3964016/1‑101 (MQ=255)
aaGATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGaa > 2:3964018/1‑101 (MQ=255)
gATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAAc > 1:3964021/1‑101 (MQ=255)
gATTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAAc < 1:3963094/101‑1 (MQ=255)
aTTCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAAcc > 2:3964024/1‑101 (MQ=255)
ttCGGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCa < 2:3963615/101‑1 (MQ=255)
ttCAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCa < 1:3963561/101‑1 (MQ=255)
cAGCGCTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAAt > 2:3964027/1‑101 (MQ=255)
gcgcTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCa < 2:3963473/73‑1 (MQ=255)
cgcTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGc < 1:3963459/101‑1 (MQ=255)
cTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCAt < 1:3963664/101‑1 (MQ=255)
cTTCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCAt < 2:3963578/101‑1 (MQ=255)
ttCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCAtt > 1:3964029/1‑101 (MQ=255)
tCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCAttg > 2:3964031/1‑101 (MQ=255)
tCGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCAttg < 2:3963594/101‑1 (MQ=255)
cGCAGTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCAttgt < 1:3963614/101‑1 (MQ=255)
gTTCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGcc > 1:3964035/1‑101 (MQ=255)
ttCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCg > 2:3964037/1‑101 (MQ=255)
ttCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCg < 2:3963839/101‑1 (MQ=255)
tCAATGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCgg < 2:3963635/101‑1 (MQ=255)
aaTGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGc < 1:3963765/101‑1 (MQ=255)
aTGGCGCAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGcc > 1:3964041/1‑101 (MQ=255)
gcgcAGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCg > 1:3964044/1‑101 (MQ=255)
aGTCACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCGTGgc > 2:3964046/1‑101 (MQ=255)
|
TCGTGGTAACAGTCTGAATTTACATCTAAATGTCCGACAAAGCCGTTTACTGCCGACGCTAAATGAAGATTCAGCGCTTCGCAGTTCAATGGCGCAGTTACTGCACCCGACGACGCCAGAGAATGACGAAGAAGAACGTCAGCGCATTGTTCAGGTATTGCGAGAAACCAATGGCATTGTTGCCGGGCCCCGTGGCGCA > NC_000913/2613633‑2613831
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
