Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A2 F13 I1 R1
|
114 |
305.6 |
14428468 |
99.7% |
14385182 |
98.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,637,938 |
T→C |
T239A (ACC→GCC) |
bamB ← |
outer membrane protein assembly factor BamB |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,637,938 | 0 | T | C | 96.9%
| 1121.9
/ 15.9
| 287 | T239A (ACC→GCC) | bamB | outer membrane protein assembly factor BamB |
| Reads supporting (aligned to +/- strand): ref base T (2/7); new base C (123/155); total (125/162) |
| Fisher's exact test for biased strand distribution p-value = 3.07e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.22e-01 |
Only 100 of 287 total aligned reads displayed.
GATCAAGCGCCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGTAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCACGACGGCC > NC_000913/2637839‑2638035
|
gATCAAGCGCCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGTa < 1:3999939/101‑1 (MQ=255)
aTCAAGCGCCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAg < 2:4000164/101‑1 (MQ=255)
aTCAAGCGCCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAg < 2:3999961/101‑1 (MQ=255)
tCAAGCGCCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGa > 1:4000464/1‑101 (MQ=255)
tCAAGCGCCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGa < 1:3999741/101‑1 (MQ=255)
aGCGCCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAAcc < 2:4000088/101‑1 (MQ=255)
aGCGCCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAAc > 2:4000468/1‑100 (MQ=255)
cgcCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCgg > 1:4000472/1‑101 (MQ=255)
gcCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGt < 2:4000059/101‑1 (MQ=255)
gcCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGt > 2:4000476/1‑101 (MQ=255)
gcCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGt > 2:4000473/1‑101 (MQ=255)
gcCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGt < 1:4000066/101‑1 (MQ=255)
gcCGTCAGATTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGt < 2:3999978/101‑1 (MQ=255)
ccGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTc < 1:3999864/101‑1 (MQ=255)
ccGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTc < 1:3999952/101‑1 (MQ=255)
cGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCg > 1:4000479/1‑101 (MQ=255)
gTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGc < 2:4000006/101‑1 (MQ=255)
gTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGc > 2:4000484/1‑101 (MQ=255)
tCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGcc > 1:4000487/1‑101 (MQ=255)
ggTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTgg > 2:4000489/1‑101 (MQ=255)
ttACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGa > 1:4000494/1‑101 (MQ=255)
tACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGaa > 2:4000495/1‑101 (MQ=255)
ccATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAAt < 1:4000101/101‑1 (MQ=255)
aTTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATAc > 1:4000501/1‑101 (MQ=255)
aTTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATAc < 1:3999903/101‑1 (MQ=255)
aTTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATAc > 2:4000500/1‑101 (MQ=255)
ataGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACgct < 1:3999976/101‑1 (MQ=255)
taGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACgctg < 1:4000050/101‑1 (MQ=255)
ggCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCg > 2:4000506/1‑83 (MQ=255)
ggCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACgctgct < 1:4000443/101‑1 (MQ=255)
ccAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCtgctgc > 1:4000507/1‑101 (MQ=255)
cgcgAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCaaa > 1:4000511/1‑101 (MQ=255)
gcgAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAat > 2:4000514/1‑101 (MQ=255)
gAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAatca > 2:4000518/1‑101 (MQ=255)
aaaaCAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAatcat > 2:4000523/1‑101 (MQ=255)
aaaaCAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAatcat > 1:4000520/1‑101 (MQ=255)
aaaCAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAatcatc > 1:4000526/1‑101 (MQ=255)
aacaacGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCt < 1:3999820/101‑1 (MQ=255)
aacaacGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCt < 2:3999914/101‑1 (MQ=255)
acaacGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTg > 2:4000528/1‑101 (MQ=255)
acGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGcc > 2:4000531/1‑101 (MQ=255)
cGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATa < 1:3999918/77‑1 (MQ=255)
cGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGccc < 1:4000133/101‑1 (MQ=255)
cGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGccc < 2:3999943/101‑1 (MQ=255)
gCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCt > 2:4000535/1‑101 (MQ=255)
gCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCt > 1:4000537/1‑101 (MQ=255)
gCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCt < 2:4000022/101‑1 (MQ=255)
gTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGtt > 1:4000542/1‑101 (MQ=255)
ttAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTc > 2:4000544/1‑101 (MQ=255)
ttAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTc < 2:4000032/101‑1 (MQ=255)
ttAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTc < 1:3999997/101‑1 (MQ=255)
aacaacGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCa > 1:4000547/1‑101 (MQ=255)
aacaacGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCa < 2:4000081/101‑1 (MQ=255)
caacGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATc < 1:4000210/101‑1 (MQ=255)
aacGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCgg > 2:4000552/1‑53 (MQ=255)
aacGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCa < 2:4000182/101‑1 (MQ=255)
acgacgGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAg < 2:4000117/101‑1 (MQ=255)
cgacgGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCa < 1:4000112/99‑1 (MQ=255)
cgacgGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGc > 1:4000556/1‑101 (MQ=255)
cgacgGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGc > 2:4000554/1‑101 (MQ=255)
cgacgGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGc < 1:4000257/101‑1 (MQ=255)
acgGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGTAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCAc < 1:3999964/101‑1 (MQ=255)
cgGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACt > 2:4000559/1‑101 (MQ=255)
cgGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACt < 1:4000085/101‑1 (MQ=255)
gggAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGTAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTg < 1:4000178/101‑1 (MQ=255)
gAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTgcg < 1:4000227/101‑1 (MQ=255)
tCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTg < 1:4000144/101‑1 (MQ=255)
tCGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTg < 1:4000169/101‑1 (MQ=255)
cGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGa > 1:4000562/1‑101 (MQ=255)
cGTGTCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGa > 1:4000564/1‑101 (MQ=255)
tgtCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGAcg > 2:4000567/1‑101 (MQ=255)
gtCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGAcgc < 2:4000104/101‑1 (MQ=255)
gtCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGAcgc > 1:4000570/1‑101 (MQ=255)
gtCAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGAcgc < 2:4000122/101‑1 (MQ=255)
cAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGa > 2:4000572/1‑101 (MQ=255)
cAACATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGa < 1:4000221/101‑1 (MQ=255)
aaCATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGAc < 2:4000446/101‑1 (MQ=255)
aaCATCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGAc < 2:3999991/101‑1 (MQ=255)
tCGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCAtt < 2:4000270/101‑1 (MQ=255)
cGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTa < 1:4000183/101‑1 (MQ=255)
cGCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTa < 1:4000129/101‑1 (MQ=255)
gCTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTAt < 1:4000153/101‑1 (MQ=255)
cTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATc < 2:4000053/101‑1 (MQ=255)
cTCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATc > 1:4000577/1‑101 (MQ=255)
tCAGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTACTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCg > 2:4000578/1‑101 (MQ=255)
aGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGcc < 1:4000189/101‑1 (MQ=255)
aGACGGTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGcc < 2:3999840/101‑1 (MQ=255)
ggTCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGcccccc > 2:4000583/1‑101 (MQ=255)
tCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCac < 1:4000077/101‑1 (MQ=255)
tCAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCac < 1:4000017/101‑1 (MQ=255)
cAATTTCGGTAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCacg < 2:4000146/101‑1 (MQ=255)
cAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCacg < 1:4000367/101‑1 (MQ=255)
cAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCacg < 2:4000246/101‑1 (MQ=255)
cAATTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCacg < 2:4000073/101‑1 (MQ=255)
aaTTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAatc > 2:4000588/1‑46 (MQ=255)
aaTTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCacga > 1:4000585/1‑101 (MQ=255)
aTTTCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCacgac < 2:4000334/101‑1 (MQ=255)
tttCGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCacgacg < 2:4000220/101‑1 (MQ=255)
cGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCGCACGACGGcc < 1:4000038/101‑1 (MQ=255)
cGGCAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCACGACGGcc > 1:4000591/1‑101 (MQ=255)
|
GATCAAGCGCCGTCAGGTTACCATTATAGGCCAGCGCGAAAACAACGCCGTTAACAACGACGGGAGTCGTGTCAACATCGCTCAGACGGTCAATTTCGGTAGAACCGGTCGCCTGGGAAATACGCTGCTGCCAAATCATCTGGCCCTGTTCCATCAGCACTGCGCTGACGCGACCATTATCGCCCCCCACGACGGCC > NC_000913/2637839‑2638035
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
