Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A23 F66 I1 R1 33 61.7 2789148 95.4% 2660847 127.5

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA BS168_reference_genome 1,685,128 C→G R490G (CGC→GGC)  topA → DNA topoisomerase I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*BS168_reference_genome1,685,1280CG96.7% 221.1 / ‑3.0 61R490G (CGC→GGC) topADNA topoisomerase I
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (34/25);  total (36/25)
Fisher's exact test for biased strand distribution p-value = 5.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

AAAGATATAGAACCTGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGCGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGGAGAGAGATCTTGATC  >  BS168_reference_genome/1684993‑1685263
                                                                                                                                       |                                                                                                                                       
aaaGATATAGAACCTGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAgcggggcg                                                                                                                                      >  4:203330/1‑139 (MQ=255)
  aGATATAGAACCTGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCCCATAAGCTCCGACACGTGATACTATTCAgccgggcggc                                                                                                                                    >  2:134947/1‑139 (MQ=255)
  aGATATAGAACCTGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAgcggggcggc                                                                                                                                    >  3:101875/1‑139 (MQ=255)
       taGAACCTGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGATGACCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGGCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACg                                                                                                                                <  5:91117/138‑1 (MQ=255)
           aCCTGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCa                                                                                                                           <  1:232484/139‑1 (MQ=255)
           aCCTGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCGTGTTAAAACCCTTGAAGAACGCGGGATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCa                                                                                                                           <  5:59191/139‑1 (MQ=255)
              tGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGATCCGACACTTGATACTATTCAGCGGGGAGGCTACGTGGCATTg                                                                                                                        >  6:91117/1‑139 (MQ=255)
               gAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTg                                                                                                                        >  8:285111/1‑138 (MQ=255)
               gAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTAGAAGAACGCGGTATCGGCCGTCCATCAACCTAGGCTCCGACACTTGATACTATTCAGCGGGGCGGCGACGTGGCATTg                                                                                                                        >  6:59191/1‑138 (MQ=255)
                     caTTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGataat                                                                                                                  >  5:317371/1‑138 (MQ=255)
                      aTTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGAtaataa                                                                                                                <  6:317371/139‑1 (MQ=255)
                          tACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGt                                                                                                            >  4:165354/1‑139 (MQ=255)
                               aGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGt                                                                                                       >  6:324203/1‑139 (MQ=255)
                                 ccgccTCCGCGATATACTGAGGCCCGGCTTGTTTAAACCCTTGAAGAAAGCGGTATCGGCCGTCCATCCACATATTCTCCGACACTTGATACTATTCATCGGGGCGGCTACGTGGCATTGGATTATAAACGTTTCGtta                                                                                                     >  5:201455/1‑138 (MQ=255)
                                    ccTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGa                                                                                                  <  3:219628/139‑1 (MQ=255)
                                     cTCCGCGATATACTGAGGCCCGGCTTGTTAAACCCCTTCAAGAACGCGGTATCGGCCGTCCATCCACATCTGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGAc                                                                                                 <  8:20070/139‑1 (MQ=255)
                                     cTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGAc                                                                                                 <  3:203330/139‑1 (MQ=255)
                                     cTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGGATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGAc                                                                                                 <  1:145407/139‑1 (MQ=255)
                                               taCTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGt                                                                                       >  1:148012/1‑139 (MQ=255)
                                                    aGGCCCGGCTTGTTAAAACCCTTGAAGCACGCGGTATCGGCCGTCCCTCCCCATCTGCGCCGCCACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTGTCGTTCCGCGTGCATTGGGTCAGAt                                                                                  >  3:46192/1‑139 (MQ=255)
                                                    aGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGt                                                                                       >  1:1113/1‑134 (MQ=255)
                                                    aGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGt                                                                                       >  4:333032/1‑134 (MQ=255)
                                                    aGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGAt                                                                                  <  3:165354/139‑1 (MQ=255)
                                                    aGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGAt                                                                                  <  3:333032/139‑1 (MQ=255)
                                                    aGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGCGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGt                                                                                       >  6:143974/1‑134 (MQ=255)
                                                    aGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTAGTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGt                                                                                       >  7:238189/1‑134 (MQ=255)
                                                    aGGCCCGGCTTGGTAAAACCCTTGAAGACCGCCGTATCGGCAGTCCATCCACATATGCTCCGACACTTGATACTAATCAGCGGGGCGGCTACGAGGCAATGGAAAATAAACGTTTCGTTCCGACTGAATTAGGTCatat                                                                                  <  8:331416/139‑1 (MQ=255)
                                                       cccGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGCCACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGt                                                                               >  1:132809/1‑139 (MQ=255)
                                                         cGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGCTCGTTc                                                                             >  7:170846/1‑139 (MQ=255)
                                                         cGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGAt                                                                                  <  3:349349/134‑1 (MQ=255)
                                                         cGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGAt                                                                                  >  4:349349/1‑134 (MQ=255)
                                                         cGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTc                                                                             >  7:166227/1‑139 (MQ=255)
                                                           gCTTGTTAAAACCCTTGAAGAACTCGGTATCGTCCGACCATCCACATATGCTCCGACACTTGATAATATTCAGCGGGGCGGCTACTTGGCAATGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTctt                                                                           >  6:295106/1‑139 (MQ=255)
                                                                ttAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTcttgact                                                                       <  4:242683/138‑1 (MQ=255)
                                                                ttAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTcttgact                                                                       <  1:134947/138‑1 (MQ=255)
                                                                       ccTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATg                                                               <  1:148211/139‑1 (MQ=255)
                                                                                 cgcgGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTcttgact                                                                       <  5:234770/121‑1 (MQ=255)
                                                                                 cgcgGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTcttgact                                                                       >  6:234770/1‑121 (MQ=255)
                                                                                 cgcgGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTcc                                                     >  6:235419/1‑139 (MQ=255)
                                                                                 cgcgGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGGGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGTGGTTTTcc                                                     >  2:152122/1‑139 (MQ=255)
                                                                                      tATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCt                                                   >  1:314185/1‑136 (MQ=255)
                                                                                        tCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGAt                                              <  8:170846/139‑1 (MQ=255)
                                                                                        tCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGAt                                              <  8:166227/139‑1 (MQ=255)
                                                                                                ccatccaCATAAGCTCCGAAACTTGATACTAGTCAGCGGGGCGGCTACGTGGCATTTGATAATAAACGTTTCGTTACCACTGAATTAGGTGAGCTCGTTCTTGACTTTATCAAGCAGTTTATCCCAGACATCATTTACg                                      >  2:271413/1‑139 (MQ=255)
                                                                                                           tGCTCCGACACTTGATACTATTCAGCGGGGCGTCTAAGTGGCATTTGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTAc                            <  6:201455/138‑1 (MQ=255)
                                                                                                             cTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAAt                                                                                            <  1:182490/72‑1 (MQ=255)
                                                                                                             cTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAAt                                                                                            >  2:182490/1‑72 (MQ=255)
                                                                                                             cTCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGc                         >  8:342865/1‑139 (MQ=255)
                                                                                                              tCCGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCCTTAACGTTGAGTTTACAGc                         >  6:236162/1‑138 (MQ=255)
                                                                                                                cGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGCTCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCt                        <  6:246437/137‑1 (MQ=255)
                                                                                                                cGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTcttgact                                                                       <  2:242884/90‑1 (MQ=255)
                                                                                                                cGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTcttgact                                                                       >  1:242884/1‑90 (MQ=255)
                                                                                                                cGACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCt                        <  2:148012/137‑1 (MQ=255)
                                                                                                                cGACACTTGATACTATTCAGCGGCGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTa                       >  8:5065/1‑138 (MQ=255)
                                                                                                                 gACACTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTaa                      >  3:86619/1‑138 (MQ=255)
                                                                                                                  acacTTGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTaaaa                    >  4:86323/1‑139 (MQ=255)
                                                                                                                      ttGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATgg                 >  8:193646/1‑138 (MQ=255)
                                                                                                                      tagATACTATTCAGCGCGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATg                  >  4:273806/3‑137 (MQ=255)
                                                                                                                       tGATACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATg                  >  8:34881/1‑136 (MQ=255)
                                                                                                                         aTACTATTCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGgaga              <  4:101875/138‑1 (MQ=255)
                                                                                                                               ttCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGGAGAGAGATCt       >  7:120028/1‑139 (MQ=255)
                                                                                                                               ttCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGGAGAGAGATCt       >  2:92244/1‑139 (MQ=255)
                                                                                                                               ttCAGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGGAGAGAGATCt       >  3:234235/1‑139 (MQ=255)
                                                                                                                                  aGCGGGGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGGAGAGAGATCTTGa    <  1:92244/139‑1 (MQ=255)
                                                                                                                                   gcggggcggcTACGTTGCATTGGATAATAAACTTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGATAAAATGGAGAGAGATCTTGAt   <  1:271413/139‑1 (MQ=255)
                                                                                                                                    cggggcggcTACGTGGCATTGGATAATAACCGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTGGCGTTTACAGCTATAATGGAGAGAGATCTTGagc  >  5:12161/1‑137 (MQ=255)
                                                                                                                                    cggggcggcTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTATCGTTGAGTTTACAGCTAAAATGGAGAGAGATCTTGATc  <  8:238189/139‑1 (MQ=255)
                                                                                                                                    cggggcggcTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGGAGAGAGATCTTGAt   >  4:197773/1‑138 (MQ=255)
                                                                                                                                       |                                                                                                                                       
AAAGATATAGAACCTGAGCAGCATTTTACCCAGCCGCCTCCGCGATATACTGAGGCCCGGCTTGTTAAAACCCTTGAAGAACGCGGTATCGGCCGTCCATCCACATATGCTCCGACACTTGATACTATTCAGCGGCGCGGCTACGTGGCATTGGATAATAAACGTTTCGTTCCGACTGAATTAGGTCAGATCGTTCTTGACTTGATCATGGAGTTTTTCCCTGAGATCATTAACGTTGAGTTTACAGCTAAAATGGAGAGAGATCTTGATC  >  BS168_reference_genome/1684993‑1685263

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

N/A