Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A21 F66 I1 R1 35 99.0 4347662 95.6% 4156364 127.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA BS168_reference_genome 1,684,043 T→C I128T (ATC→ACC)  topA → DNA topoisomerase I

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*BS168_reference_genome1,684,0430TC100.0% 262.5 / NA 69I128T (ATC→ACC) topADNA topoisomerase I
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (41/28);  total (41/28)

AAGGGGAAGCGATTGCATGGCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGATCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTGCAATCCGTTGCCCTCCG  >  BS168_reference_genome/1683917‑1684178
                                                                                                                              |                                                                                                                                       
aaGGGGAAGCGATTGCATGGCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGAttt                                                                                                                             <  8:30982/139‑1 (MQ=255)
  ggggAAGCGATTGCATGGCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAg                                                                                                                           <  1:152103/139‑1 (MQ=255)
  ggggAAGCGATTGCATGGCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAg                                                                                                                           <  3:93258/139‑1 (MQ=255)
  ggggAAGCGATTGCATGGCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGGGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAg                                                                                                                           <  7:338034/139‑1 (MQ=255)
        gCGATTGCATGTCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGCCGCTATTAAGGAATCGTTTAAGCATACACGCATGACCAATATTGATTTAGTGGAtt                                                                                                                     >  8:382834/1‑138 (MQ=255)
             tGCATGGCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGCCGCTATTAAGGAATCGTTTAAGCCTCCCCGCATGACCAATATGGATTTAGTGGATGCACAg                                                                                                                >  1:129836/1‑139 (MQ=255)
              gCATGGCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAg                                                                                                                <  8:2079/138‑1 (MQ=255)
               cATGGCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGc                                                                                                               >  4:426699/1‑138 (MQ=255)
                        tGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGAc                                                                                                      <  8:316076/138‑1 (MQ=255)
                         ggCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACg                                                                                                     >  2:405529/1‑138 (MQ=255)
                              acaGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTAAAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAAAAAGGATTTAGTGGATGCACCTCAATCGAGACGTAttt                                                                                                >  4:497875/1‑138 (MQ=255)
                                aGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTAttt                                                                                                >  1:174879/1‑136 (MQ=255)
                                  tCTTGATTTAGATCTCAACTCAGACTGCAGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATAGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCAACGCAAGCGAGACGTATTTTAgcc                                                                                           >  3:90968/1‑137 (MQ=255)
                                   cTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGa                                                                                            >  6:167703/1‑137 (MQ=255)
                                    ttGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAg                                                                                         >  6:265193/1‑139 (MQ=255)
                                           aGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGt                                                                                   <  8:64143/138‑1 (MQ=255)
                                            gATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGAttt                                                                                                                             >  1:515703/1‑95 (MQ=255)
                                            gATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGAttt                                                                                                                             <  2:515703/95‑1 (MQ=255)
                                            gATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTATTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCg                                                                                 >  2:539517/1‑139 (MQ=255)
                                            gATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGAc                                                                                                      <  7:167130/118‑1 (MQ=255)
                                            gATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGAc                                                                                                      >  8:167130/1‑118 (MQ=255)
                                            gATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCg                                                                                 >  3:62824/1‑139 (MQ=255)
                                            gATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCg                                                                                 <  5:284565/139‑1 (MQ=255)
                                            gATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCAATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGAAGTTTAGCCAGGCTTGTCg                                                                                 >  4:399613/1‑139 (MQ=255)
                                            gATCTCAACTCAGACTGCCGTGTGGTGTTTAAACAAATTACAAAAGACGCGATTAAGGAATAGTTTAAGCATACCCGCATGACCACTATTGATTTAGTGGATGAACAGCAAGCGCGACCTATTTTATCAAGGCGTGTCg                                                                                 >  5:47789/1‑139 (MQ=255)
                                                       aGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAAt                                                                       <  5:167703/138‑1 (MQ=255)
                                                         aCTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGa                                                                                            <  3:188287/115‑1 (MQ=255)
                                                         aCTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGa                                                                                            >  4:188287/1‑115 (MQ=255)
                                                         aCTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCAAGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAg                                                                    >  5:354113/1‑139 (MQ=255)
                                                                       tttAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATgg                                                       >  7:378799/1‑138 (MQ=255)
                                                                       tttAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGAAATAAAATCACTCCAATCTTATgg                                                       >  1:229395/1‑138 (MQ=255)
                                                                       tttAACGAAAATACAAAAGACGCGATTAACGAATCGTTTAAGCAACCCCCCATGACCAATATGGATTTAGTGGATGCACAGCAACCGAGACGTATATTATACAGGCTAGTCGGAAATAAAATCAGTCCAAACTTAttg                                                       >  8:371121/1‑136 (MQ=255)
                                                                            cGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGaaaaaa                                                 <  4:236682/139‑1 (MQ=255)
                                                                               aaTTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGt                                               >  1:495449/1‑138 (MQ=255)
                                                                                 ttACAAAAGACGCTATTAAGTAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGAc                                                                                                      <  3:51732/81‑1 (MQ=255)
                                                                                 ttACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGAc                                                                                                      >  4:51732/1‑81 (MQ=255)
                                                                                 ttACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCa                                             >  4:379577/1‑138 (MQ=255)
                                                                                 ttACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCa                                             >  6:312502/1‑138 (MQ=255)
                                                                                 ttACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCa                                             >  5:138968/1‑138 (MQ=255)
                                                                                     aaaaGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCaaaaaa                                        <  2:174879/139‑1 (MQ=255)
                                                                                          aCGCTATTAAGGAATCGTTTAAGCATCCCCGCCTGACCAATATGGATTTAGTGTATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCt                                   <  7:382834/139‑1 (MQ=255)
                                                                                          aCGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCt                                   <  5:312502/139‑1 (MQ=255)
                                                                                          aCGCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCt                                   <  6:507548/139‑1 (MQ=255)
                                                                                            gCTATTAAGGAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCt                                   >  6:299933/1‑137 (MQ=255)
                                                                                                     gAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGAc                        <  7:371431/139‑1 (MQ=255)
                                                                                                     gAATCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGAc                        <  7:371121/139‑1 (MQ=255)
                                                                                                        tCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACa                                                                                          <  4:85727/70‑1 (MQ=255)
                                                                                                        tCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACa                                                                                          >  3:85727/1‑70 (MQ=255)
                                                                                                        tCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATTAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGAcgcg                     >  2:468464/1‑139 (MQ=255)
                                                                                                        tCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGAcgcg                     >  8:57940/1‑139 (MQ=255)
                                                                                                        tCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGAcgcg                     >  3:170052/1‑139 (MQ=255)
                                                                                                        tCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGAcgcg                     >  6:352348/1‑139 (MQ=255)
                                                                                                        tCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGAcgcg                     >  5:315850/1‑139 (MQ=255)
                                                                                                        tCGTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGAcgcg                     >  7:249077/1‑139 (MQ=255)
                                                                                                          gTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGt                    <  6:47789/138‑1 (MQ=255)
                                                                                                          gTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTg                   >  8:255407/1‑139 (MQ=255)
                                                                                                          gTTTAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTg                   <  5:265193/139‑1 (MQ=255)
                                                                                                             tAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGAc                                                                                                      <  3:329168/53‑1 (MQ=255)
                                                                                                             tAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGAc                                                                                                      >  4:329168/1‑53 (MQ=255)
                                                                                                             tAAGCATCCCCGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTGCaa                >  1:179076/1‑139 (MQ=255)
                                                                                                                    ccccGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCg                                                                                 <  4:328048/67‑1 (MQ=255)
                                                                                                                    ccccGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCg                                                                                 >  3:328048/1‑67 (MQ=255)
                                                                                                                    ccccGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTGCAATCCGTTg         >  7:54648/1‑139 (MQ=255)
                                                                                                                    ccccGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTGCAATCCGTTg         >  3:221785/1‑139 (MQ=255)
                                                                                                                     cccGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGa                                                                                            >  6:342078/1‑55 (MQ=255)
                                                                                                                     cccGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGa                                                                                            <  5:342078/55‑1 (MQ=255)
                                                                                                                     cccGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTGCAATCCGTTGc        >  8:147554/1‑139 (MQ=255)
                                                                                                                      ccGCATGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTGCAATCCGTTGcc       <  3:426699/139‑1 (MQ=255)
                                                                                                                           tGACCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATTAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTGCAATCCGTTGCCCTCCg  <  1:468464/139‑1 (MQ=255)
                                                                                                                              |                                                                                                                                       
AAGGGGAAGCGATTGCATGGCATTTGGCACACAGTCTTGATTTAGATCTCAACTCAGACTGCCGTGTGGTGTTTAACGAAATTACAAAAGACGCTATTAAGGAATCGTTTAAGCATCCCCGCATGATCAATATGGATTTAGTGGATGCACAGCAAGCGAGACGTATTTTAGACAGGCTTGTCGGATATAAAATCAGTCCAATCTTATGGAAAAAAGTCAAAAAAGGGCTTAGCGCAGGACGCGTGCAATCCGTTGCCCTCCG  >  BS168_reference_genome/1683917‑1684178

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A