Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F412 I2 R1
|
70 |
105.0 |
5244496 |
94.3% |
4945559 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
255,855 |
A→T |
intergenic (‑139/‑122) |
pepD ← / → gpt |
aminoacyl‑histidine dipeptidase (peptidase D)/xanthine phosphoribosyltransferase; xanthine‑guanine phosphoribosyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 255,855 | 0 | A | T | 98.2%
| 369.0
/ ‑2.1
| 109 | intergenic (‑139/‑122) | pepD/gpt | aminoacyl‑histidine dipeptidase (peptidase D)/xanthine phosphoribosyltransferase; xanthine‑guanine phosphoribosyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base T (47/59); total (48/61) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01 |
Only 100 of 112 total aligned reads displayed.
CACAGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGT > NC_000913/255760‑255951
|
cacaGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTtaaaa > 1:2279804/1‑100 (MQ=255)
cacaGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTtaaaa < 2:2053506/100‑1 (MQ=255)
aGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGAc < 1:1537744/100‑1 (MQ=255)
gggTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGAcg > 2:1458368/1‑100 (MQ=255)
gggTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGAcg > 2:1323431/1‑100 (MQ=255)
gTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGAcg‑cg > 1:400085/1‑100 (MQ=255)
gTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGAcg‑cg > 2:1381100/1‑100 (MQ=255)
gTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGAcg‑cg < 2:2019241/100‑1 (MQ=255)
gTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGAcg‑cg < 1:2330639/100‑1 (MQ=255)
gTTAGCAGAAAATGTTGGCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGAcg‑cg < 1:1736794/100‑1 (MQ=255)
ttAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑Cgg > 2:2409522/1‑100 (MQ=255)
aGCAGAACATGTTGTCATCACAAGACAGGCTTGCGAGATATGTTAGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGAc < 1:2430653/100‑1 (MQ=255)
gCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACt < 1:485346/100‑1 (MQ=255)
cAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTc < 2:192628/100‑1 (MQ=255)
aGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCa < 1:1092596/100‑1 (MQ=255)
aaTGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCAtgtg < 2:368684/100‑1 (MQ=255)
aaTGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCAtgtg < 1:68088/100‑1 (MQ=255)
aaTGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCAtgtg < 1:95241/100‑1 (MQ=255)
aTGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGa < 2:2577081/100‑1 (MQ=255)
tgttgtCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGaa < 1:1246071/100‑1 (MQ=255)
gttgtCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGaaa > 1:1770818/1‑100 (MQ=255)
ttgtCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAAt < 1:2586585/100‑1 (MQ=255)
tgtCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATa > 2:533820/1‑100 (MQ=255)
gtCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATAc > 2:1951917/1‑100 (MQ=255)
cAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTg < 2:1236666/100‑1 (MQ=255)
aaCACAAGACATGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTgg < 2:1705242/100‑1 (MQ=255)
acacAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGt > 1:464116/1‑100 (MQ=255)
acacAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATCTGAAATACTGGt < 1:2273397/100‑1 (MQ=255)
caAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGtttt > 1:39064/1‑100 (MQ=255)
aaGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGttttt < 1:406245/100‑1 (MQ=255)
aaGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGttttt < 1:334182/100‑1 (MQ=255)
aaGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGttttt < 2:1013848/100‑1 (MQ=255)
aaGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGttttt < 1:1554414/100‑1 (MQ=255)
aGACAGGCTTGTGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTa > 2:1099973/1‑100 (MQ=255)
ggCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTgcg > 2:1330201/1‑100 (MQ=255)
ggCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTgcg > 2:34076/1‑100 (MQ=255)
ggCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTgcg > 2:963490/1‑100 (MQ=255)
gCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTgcgc > 1:1577621/1‑100 (MQ=255)
cTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGcc < 1:1475765/100‑1 (MQ=255)
cTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGcc < 2:2296206/100‑1 (MQ=255)
cTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGcc < 1:331143/100‑1 (MQ=255)
cTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTAAGAGAGAGGCAGTGCGTTAAGAGCCGACGCAC‑AAAGTGGAATACTGCTTTTTAGTgaggc < 2:2592022/100‑5 (MQ=255)
cTTGCGAGATATGTTTCAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGcc < 1:2172046/100‑1 (MQ=255)
ttGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACG‑CGGACTCCTGTGAAATACTGGTTTTTAGTGCGCCa > 1:2515574/1‑100 (MQ=255)
tGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAg < 1:739452/100‑1 (MQ=255)
tGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAg < 1:2614795/100‑1 (MQ=255)
gCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGa < 2:1397567/100‑1 (MQ=255)
gagaTATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGAtc < 1:2627557/100‑1 (MQ=255)
gaTCTGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGAtctc > 1:1202338/1‑100 (MQ=255)
atatGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATctct < 2:830006/100‑1 (MQ=255)
tatGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCTTTAAAATACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCTGATCTCta < 2:480259/100‑1 (MQ=255)
atGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCtat < 1:1181008/100‑1 (MQ=255)
atGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCtat < 1:218339/100‑1 (MQ=255)
tGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCtata > 1:1500261/1‑100 (MQ=255)
tGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCtata > 1:1500198/1‑100 (MQ=255)
tGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCtata > 1:1158066/1‑100 (MQ=255)
tGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGGTTTTAGTGCGCCAGATCTCtata > 2:1770347/1‑100 (MQ=255)
gTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATaa < 1:1342622/100‑1 (MQ=255)
gTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATaa > 1:1647907/1‑100 (MQ=255)
gTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATaa > 1:927298/1‑100 (MQ=255)
tttGAGAATTCCGCTTTAACCCACGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTTGTTTTTAGTGCGACAGATCTCTATAAt < 2:685990/100‑1 (MQ=255)
ttGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTGTTTAGTGCGCCAGATCTCTATAAtc > 1:120613/1‑100 (MQ=255)
tGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAAtct < 2:1833578/100‑1 (MQ=255)
aaTACCACTTTAACCAGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTcgcg < 1:74105/100‑1 (MQ=255)
aTACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCgcgc < 2:1418422/100‑1 (MQ=255)
cACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCTTGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAAcc < 1:2381351/100‑1 (MQ=255)
cACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAAcc > 2:1278550/1‑100 (MQ=255)
cACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGGGAAAGAGTGGTGTTTAGTGCGCCAGATCTCTATAATCTCTCGCAAcc > 2:898806/1‑100 (MQ=255)
aCTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTGGCGCAAACt > 1:2234410/1‑100 (MQ=255)
aCTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCt > 1:1401155/1‑100 (MQ=255)
aCTTTATCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCt < 1:1747369/100‑1 (MQ=255)
aTCCCGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTAtttt > 2:483635/1‑100 (MQ=255)
aTCCCGCGTCAGGGAAAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAACTACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTAttct > 2:2525355/1‑98 (MQ=255)
cccGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTcc > 1:1435725/1‑100 (MQ=255)
cccGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTcc > 2:389529/1‑100 (MQ=255)
cccGCGTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTcc > 1:1965616/1‑100 (MQ=255)
gcgTCTGGGAGAGGCAGTGCGTGAAAAGACT‑CGGACTCATGTGATTTACTTGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACTTATTTACCCCt < 2:331763/100‑1 (MQ=255)
gcgTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCt > 1:473350/1‑100 (MQ=255)
gcgTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCt < 1:1478814/100‑1 (MQ=255)
gcgTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCt < 2:1914417/100‑1 (MQ=255)
cgTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTc < 2:328859/100‑1 (MQ=255)
cgTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTc < 1:2187107/100‑1 (MQ=255)
cgTCAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTc < 1:2187030/100‑1 (MQ=255)
cAGGGGGAGGGAGTGCGTTAAAAGACC‑CGTACTCATGTGCGATACTGGTATGTATCCCGCCAGATCTCTATAGTCTCCCGCAACCTATCTTCCCCTCGaa > 2:2003100/1‑100 (MQ=255)
cAGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGaa > 2:960614/1‑100 (MQ=255)
aGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAac < 1:1120926/100‑1 (MQ=255)
aGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAac < 2:1386628/100‑1 (MQ=255)
aGGGAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAac < 2:420324/100‑1 (MQ=255)
gggAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAaca > 2:135299/1‑100 (MQ=255)
ggAGAGGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAacac > 1:232675/1‑100 (MQ=255)
gagGCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACttt < 1:914068/100‑1 (MQ=255)
ggCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTCCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACttttt > 1:506144/1‑100 (MQ=255)
ggCAGTGCGGTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCACCTCGAACACttttt > 1:1943367/1‑100 (MQ=255)
gCAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTa < 2:1583263/100‑1 (MQ=255)
cAGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTaa < 2:780093/100‑1 (MQ=255)
aGTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAg < 2:412272/100‑1 (MQ=255)
gTGCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGc > 1:1817108/1‑100 (MQ=255)
gCGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCg < 2:2376353/100‑1 (MQ=255)
cGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTTCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGt < 2:2145650/100‑1 (MQ=255)
cGTTAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGt > 1:1693101/1‑100 (MQ=255)
|
CACAGGGTTAGCAGAAAATGTTGTCAACACAAGACAGGCTTGCGAGATATGTTTGAGAATACCACTTTATCCCGCGTCAGGGAGAGGCAGTGCGTAAAAAGACG‑CGGACTCATGTGAAATACTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGT > NC_000913/255760‑255951
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
