Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F406 I2 R1
|
14 |
182.2 |
9069404 |
93.8% |
8507100 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
1,293,008 |
IS1 (+) +9 bp |
intergenic (‑86/‑511) |
hns ← / → tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 1050545 | NA (NA) | 168 (0.930) |
96/198 |
0.5 |
97.5% |
noncoding (768/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
1293008 = |
4 (0.020) | intergenic (‑86/‑519) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| * |
? |
NC_000913 |
= 1293016 | 4 (0.020) | 171 (0.950) |
98/198 |
0.4 |
97.5% |
intergenic (‑94/‑511) |
hns/tdk |
global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase |
| ? | NC_000913 |
= 1979270 |
NA (NA) | noncoding (1/768 nt) |
IS1 |
repeat region |
Only 100 of 168 total aligned reads displayed.
CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1050447‑1050545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGA > NC_000913/1293008‑1293106
nGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCA > 1:4002943/2‑100
CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCA < 2:746193/100‑1
GGAAGTCGCTGTCGTTCCCAAAATCGGTGGAGCTGCATGACAAAGTCGTCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCCTTACCAc < 2:1022022/100‑2
GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTCGGAGTCATTACCAGG < 2:3408970/100‑1
GTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAAT < 1:535526/100‑1
TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATT < 1:1721664/100‑1
TCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATT > 1:4077699/1‑100
TCGCTGTCGTTCCCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATT < 1:2415236/100‑1
TCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAAT < 2:1516102/100‑1
TCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAAT < 2:1680915/100‑1
GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTG < 1:2654682/100‑1
TTCTCAAAATCGGTGGAGCTGCATGACAACGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGTGTCATTACCAGGAATTCAAAATTGT < 2:1266173/100‑1
TCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTT > 1:1704005/1‑100
CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTC < 1:706025/100‑1
CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTC < 1:3698771/100‑1
CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTT < 2:2282960/100‑1
CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTT > 1:3465305/1‑100
CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTT > 1:1633484/1‑100
AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTT < 2:2917619/100‑1
AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTCTCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTA < 2:3167021/100‑1
TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTT < 1:3374701/100‑1
GGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTG > 1:1948418/1‑100
GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGT > 1:3856297/1‑100
GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGC < 2:2303831/100‑1
GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGC < 1:1002651/100‑1
GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGC > 1:942726/1‑100
GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCC < 2:2182139/100‑1
AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCG < 1:3790035/100‑1
GCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGC > 1:3831619/1‑100
CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCC < 1:6453/100‑1
CTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCC > 1:4161751/1‑100
TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCA > 1:3136231/1‑100
TGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCA > 1:832856/1‑100
CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGTAATTCAAAATTGTTCTTTATTTTGTGCCGCCAAT < 1:2060654/100‑1
TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGTAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAA < 2:4209280/100‑1
TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAA < 2:779928/100‑1
TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAA > 2:2625938/1‑100
GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAA < 1:341041/100‑1
GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAA > 1:4863/1‑100
ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAAT > 2:2590931/1‑100
CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATA > 1:3100016/1‑100
CAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATA > 2:3481924/1‑100
TCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCCATAAATATCTTT < 2:4325335/100‑1
CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTT > 1:1291246/1‑100
ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTC < 1:2739868/100‑1
ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTC > 1:775300/1‑100
TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCA < 2:2905675/100‑1
TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCA < 1:2512447/100‑1
CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCAT > 2:2194440/1‑100
GGGCATTATCAGAACATAAAACACTATCAATAAGATGGAGTCATTACCAGGAAGTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATA > 2:4137361/1‑100
GCATTATCTGAACATAAAACACTATCAATAACTTGGAGTCATTACCAGGAATTCAAAATTATTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAA < 2:349541/100‑1
ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAAT < 2:3289678/100‑1
TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATCACCAGGAATACAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATT > 2:862507/1‑100
TATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATTTCTTTTCATAAAATTA < 1:1450882/100‑1
ATCTTAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAG > 2:1554062/1‑100
ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAG > 2:2354050/1‑100
ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAG < 2:3376080/100‑1
ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAG > 2:3208907/1‑100
ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAG > 1:1055466/1‑100
TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGC < 2:3999158/100‑1
GAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAG < 2:2189727/100‑1
GAACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAG < 1:393103/100‑1
ACATAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAA > 2:2476751/1‑100
TAAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAG < 1:1719522/100‑1
AAAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGA < 1:3601022/100‑1
AAACACTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAC > 1:1541219/1‑100
CTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGC > 2:1318340/1‑100
CTATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGC > 1:750604/1‑100
TATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCA < 1:1607583/100‑1
ATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAT < 1:3202992/100‑1
ATCAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCAT > 1:4435319/1‑100
CAATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATAT > 1:2995052/1‑100
AATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATA > 1:2022702/1‑100
AATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATA > 1:2766679/1‑100
ATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATCTCTTTTCATAAAATTAGCTAGAAAAGACGCGGCATATAG > 1:4274255/1‑100
ATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAG > 1:3327707/1‑100
ATAAGTTGGAGTCATTACCAGGAATTCAAAATTGTTATTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAG > 2:394220/1‑100
AGTTGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCC < 2:770723/100‑1
TGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT < 1:2878639/100‑1
TGGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTAT < 1:965710/100‑1
GGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATT < 2:498047/100‑1
GGAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATT < 1:1660143/100‑1
GAGTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTT < 2:1795103/100‑1
GTCATTAGCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTAC > 2:623095/1‑100
GTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTAC < 1:3271669/100‑1
GTCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCAGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGACCTATTTAC > 1:3988104/1‑100
TCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAATAGACGCGGCATATAGCCCTATTTACA < 2:3217549/100‑1
TCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACA < 2:4107493/100‑1
TCATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACA > 2:272301/1‑100
CATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC > 2:1911421/1‑100
CATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACAC > 1:1468596/1‑100
ATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTCTTTACACC < 2:1874398/100‑1
ATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC < 2:1456873/100‑1
ATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC > 1:1676039/1‑100
ATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC < 2:3878907/100‑1
ATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACC > 2:520833/1‑100
ATTACCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGAAGCGGCATATAGCACTATTTACACC > 1:2727069/1‑100
CCAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATG < 2:2843451/100‑1
CAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGA > 1:1636572/1‑100
CAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGA > 1:2107857/1‑100
CGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1050447‑1050545
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGA > NC_000913/1293008‑1293106
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
