Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F406 I2 R1
|
14 |
182.2 |
9069404 |
93.8% |
8507100 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
1,995,398 |
IS5 (–) +4 bp |
intergenic (‑39/‑417) |
uvrY ← / → yecF |
response regulator in two‑component regulatory system with BarA/DUF2594 family protein |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
1995398 = | 18 (0.100) | 112 (0.620) |
74/198 |
2.2 |
85.7% |
intergenic (‑39/‑420) |
uvrY/yecF |
response regulator in two‑component regulatory system with BarA/DUF2594 family protein |
| ? | NC_000913 |
= 2290113 |
NA (NA) | noncoding (1/1195 nt) |
IS5 |
repeat region |
| * |
? |
NC_000913 |
= 1995401 | 18 (0.100) | 135 (0.750) |
81/198 |
1.5 |
87.8% |
intergenic (‑42/‑417) |
uvrY/yecF |
response regulator in two‑component regulatory system with BarA/DUF2594 family protein |
| ? | NC_000913 |
2101749 = |
NA (NA) | noncoding (1195/1195 nt) |
IS5 |
repeat region |
Only 100 of 112 total aligned reads displayed.
GGACAATCGAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1995494‑1995398
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC < NC_000913/2290113‑2290025
GGACAATCGAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGA < 2:4294028/100‑1
GACAATCGAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAA > 1:4320265/1‑100
ACAATCGAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAG > 2:2386429/1‑100
CAATCGAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCTCTAATATACGAATGACTAAGGAAGG > 2:4328384/1‑100
CAATCGAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATAACTAAGGAAGG > 2:4003234/1‑100
AATCGAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGT > 2:2827927/1‑100
TCGAATTGAAAAAAAAGAAAAAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGC < 2:836354/100‑1
GAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGc > 2:1052926/1‑99
GAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGA > 2:2050933/1‑100
GAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGA < 1:2169994/100‑1
ATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAAC > 2:1381840/1‑100
TTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACA > 2:3489268/1‑100
TTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACA < 2:1616488/100‑1
TGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAA > 2:2466016/1‑100
GACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGTCTAAGGAAGGTGCGAACAAG < 1:3561906/100‑1
GACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAG < 1:3832802/100‑1
GACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAG > 1:2667050/1‑100
GACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAG < 1:1835411/100‑1
CAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTC > 1:4480922/1‑100
CAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTC < 2:3909282/100‑1
CAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTC > 1:53327/1‑100
AAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCC < 1:2075314/100‑1
AAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCC < 1:3667815/100‑1
AAACGAGAGCAAAATCGAATACCTACCATTTTTAACGTTTCACAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCT < 1:3984557/100‑1
AAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCT < 1:1135416/100‑1
CGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGAT > 1:2005762/1‑100
CGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGAT > 1:1984640/1‑100
AGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATAT > 1:552705/1‑100
GAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATG < 2:350312/100‑1
GAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATG > 2:3008859/1‑100
AGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGA < 2:541877/100‑1
GAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAG > 1:3799033/1‑100
GAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAG > 2:478147/1‑100
AAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGA < 1:3945309/100‑1
AAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGA < 1:3095735/100‑1
AAAAATCGAATACCCACCATTTTTAACGTTTAAAAGAAGAAAAAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGA < 2:1242214/100‑1
AAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATC > 1:495370/1‑100
AAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATC > 1:1417560/1‑100
ATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT > 2:858735/1‑100
ATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCAT > 2:4260061/1‑100
CGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGn < 2:4002178/100‑2
CGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGT < 1:1973613/100‑1
GAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTT < 2:1484596/100‑1
GAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTT < 1:3596749/100‑1
GAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTT < 1:2962044/100‑1
GAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTT < 2:1958305/100‑1
ATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTG > 2:3652288/1‑100
CCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAATTCCCTGATATGAGATCATGTTTGTCA > 2:2660857/1‑100
CCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA > 1:3190189/1‑100
CCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA < 2:2066844/100‑1
CCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCA > 1:6989/1‑100
CCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGAGAGAACAAGTCCCTGATATGAGATCATGTTCGTCAT > 2:2744218/1‑100
CACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATC < 2:2638188/100‑1
CATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGG < 2:1863287/100‑1
TTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAG < 1:622974/100‑1
TTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGC < 1:3922136/100‑1
TTTTAACGATTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCTAACAAGTACCTGATATGAGATCATCTTTTTCATCTGGAGC > 2:1331504/1‑100
TTTAACGTTTCCAACTTGCAATAAAAACCGCTAATATACGAATCACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCC < 2:471093/100‑1
TTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACCAAGGAAGGTGCGAACAAGTCCCTCATATGAGATCATGCTTGTCATCTGGAGCCA > 2:846966/1‑100
TAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACGAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCAT < 1:3146192/100‑1
AACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAAAAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATA > 2:1172009/1‑100
ACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAG < 2:1153412/100‑1
GTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAA > 1:1200882/1‑100
GTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAA > 1:809986/1‑100
GTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAA > 1:4109039/1‑100
TTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAAC > 2:2200331/1‑100
TTCAAAGTTGCAATAAAAACCGCTAATATACGAATGGCTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACA < 1:1235232/100‑1
CAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGG > 2:1781664/1‑100
AAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGT < 1:22385/100‑1
AAGTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGT < 1:3731575/100‑1
GTTGCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTC < 2:233633/100‑1
GCAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATC > 2:2545908/1‑100
CAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACACGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACATGGTTCATCA < 2:2627662/100‑1
CAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCA > 1:4063605/1‑100
CAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCA < 2:1089443/100‑1
CAATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGAACATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCA > 1:1718609/1‑100
ATAAAAACCTCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATG < 2:3882418/100‑1
ATAAAAACCGCTAATATACGAATGAGTAGGGAAGGTGAGCACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACCGGGTTCATCATG < 2:3902092/100‑1
ATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATG > 1:1468075/1‑100
ATAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATG < 2:2739267/100‑1
ATAAAAACCGCTAATATACGAATGACTAAGGAAGGTACGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATG > 2:1873014/1‑100
TAAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGA > 2:4250735/1‑100
AAAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAG > 2:710617/1‑100
AAAACCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTCATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGT > 2:540465/1‑100
CCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATC < 2:4238924/100‑1
CCGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATC < 1:2497423/100‑1
CGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCA < 2:3188953/100‑1
CGCTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCA < 2:4397762/100‑1
CTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAAC < 1:480837/100‑1
CTAATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAAC > 1:3345349/1‑100
AATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTT > 1:2476927/1‑100
ATATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTA < 2:3245130/100‑1
TATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTAC > 2:2852546/1‑100
ATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACn < 1:3626782/100‑2
ATACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACC < 2:2949181/100‑1
TACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCT > 1:1518919/1‑100
TACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCT > 1:4094561/1‑100
TACGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCT > 1:1177959/1‑100
CGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC < 1:986309/100‑1
CGAATGACTAAGGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC > 2:1161446/1‑100
GGACAATCGAATTGACAAAAACGAGAGAAAAATCGAATACCCACCATTTTTAACGTTTCAAAGTTGCAATAAAAACCGCTAATATACGAATGACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1995494‑1995398
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGAAGGTGCGAACAAGTCCCTGATATGAGATCATGTTTGTCATCTGGAGCCATAGAACAGGGTTCATCATGAGTCATCAACTTACCTTC < NC_000913/2290113‑2290025
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
