Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F403 I2 R1
|
11 |
175.4 |
8765285 |
94.0% |
8239367 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC |
NC_000913 |
4,189,493 |
Δ17 bp |
coding (4144‑4160/4224 nt) |
rpoC → |
RNA polymerase, beta prime subunit |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
= 4189492 | 9 (0.050) | 194 (1.120) |
113/196 |
0.0 |
96.1% |
coding (4143/4224 nt) |
rpoC |
RNA polymerase, beta prime subunit |
| ? | NC_000913 |
4189510 = |
7 (0.040) | coding (4161/4224 nt) |
rpoC |
RNA polymerase, beta prime subunit |
Only 100 of 199 total aligned reads displayed.
AGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4189393‑4189492
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCG > NC_000913/4189510‑4189608
AGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCA > 2:138545/1‑100
GAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAA > 1:1206912/1‑100
GAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAA > 1:2612813/1‑100
GAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGA > 1:1051404/1‑100
GAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGA < 1:3870845/100‑1
GAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGA > 1:3246766/1‑100
GAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGA > 1:2846465/1‑100
GAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGA > 2:3121670/1‑100
ACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACG < 1:1590575/100‑1
CGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGC > 1:454594/1‑100
GTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCA < 2:1857554/100‑1
GTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCA > 2:2369093/1‑100
GTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCC < 2:3570916/100‑1
GTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCC < 2:2254797/100‑1
GTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCC < 1:1898309/100‑1
CGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTG < 1:2785405/100‑1
CGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTG > 1:4368913/1‑100
GTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGG > 2:2160405/1‑100
TCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGC < 2:790608/100‑1
TCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGC < 2:2243022/100‑1
CTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCA > 2:2301341/1‑100
CTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCA < 1:1577752/100‑1
TGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAG > 2:3147951/1‑100
TGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAG < 1:1637788/100‑1
GATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGA < 1:2587596/100‑1
GATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGA > 2:3889455/1‑100
ATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGTAGAA > 2:6800/1‑100
TCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAAC < 2:490338/100‑1
TCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAAC < 2:1321101/100‑1
CCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCAGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTG > 1:4098089/1‑100
GGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCT < 1:1414022/100‑1
GGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCT > 1:682444/1‑100
GCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTG < 2:1806515/100‑1
AGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGAATCTGCCAGCCTGGCAGAACTGCTGAA < 1:2191520/100‑1
GGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAAC < 1:780217/100‑1
GGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAAC < 1:481916/100‑1
TACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGC > 2:2420568/1‑100
ACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCA > 2:1437116/1‑100
ACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCA < 2:583138/100‑1
ACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCA > 1:86629/1‑100
ACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCA > 1:2127499/1‑100
CGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGG < 2:2999566/100‑1
CGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGG < 2:4285493/100‑1
GGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGT > 1:703062/1‑100
GGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGT > 2:1570192/1‑100
GTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTC < 2:3777774/100‑1
tatGCGTACCACCAGGATCGTATGCGACGCCGTGCTTCGGGTGAAGCTCCGGCTGCAAGACGCCTCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTG > 2:2441137/4‑100
TACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTG < 2:3396094/100‑1
ACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGG < 1:2581231/100‑1
CGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGG < 1:956700/100‑1
CGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGG < 1:2655118/100‑1
CGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCG > 1:1696846/1‑100
TACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGT < 2:2429561/100‑1
ACCACCAGGATCGTATGCGTCGCCGCGCTGCGGGTGAAGCTCCGGCTGCAAGGCGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTT < 2:2728895/100‑1
CCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTC < 1:1240486/100‑1
CACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCT > 1:1878087/1‑100
CAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGAT < 2:226295/100‑1
AGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATA < 2:1725008/100‑1
AGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATA < 2:328842/100‑1
GGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAA > 2:2939404/1‑100
GGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAA < 1:2950351/100‑1
GATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAAC < 1:1224875/100‑1
ATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACG < 2:1988412/100‑1
ATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACG > 2:559822/1‑100
CGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAG > 2:2865510/1‑100
CGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAG < 1:565580/100‑1
GTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGT > 1:474025/1‑100
GTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGT < 2:107725/100‑1
GTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGACTGGCAGAACTGCTGAACGCGGGTCTGGGCGGATCTGATAACGAGT > 2:725584/1‑100
ATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAA > 1:2426571/1‑100
TGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAAT > 2:618827/1‑100
TGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAAT < 2:2637462/100‑1
GCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTCAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATC > 2:3651528/1‑100
CGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGGCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCG > 1:3909848/1‑100
TCGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTT < 1:3538832/100‑1
CGCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTA < 1:774955/100‑1
GCCGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAA > 2:3513329/1‑100
CGTGCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATC < 1:1385302/100‑1
GCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGC > 2:955233/1‑100
GCTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGC > 1:2238516/1‑100
CTGCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCA < 1:530637/100‑1
GCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAA > 2:439640/1‑100
GCGGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAA < 1:1460842/100‑1
GGGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATA > 1:1435249/1‑100
GGTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAA < 2:816300/100‑1
GTGAAGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAAC < 1:4173662/100‑1
AGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAA > 1:1016691/1‑100
AGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAA < 2:4239010/100‑1
AGCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAA > 2:3095090/1‑100
GCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAGTAACGTAAA > 1:2876641/1‑100
GCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAA > 1:655181/1‑100
GCTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAA < 1:2372103/100‑1
CTCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAA < 1:2294423/100‑1
TCCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAA > 2:2751517/1‑100
CCGGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGAAAAAAACAAAAAAAC < 2:2096940/100‑1
GGCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCC < 1:3414878/100‑1
GGCTGCAAGACGCATCTGCCAGCCCGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAAGCCGCAAATAACGTAAAAACCC > 1:4119650/1‑100
GCTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCG < 2:4106848/100‑1
CTGCAAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGC > 1:2095679/1‑100
AAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCG > 1:2064092/1‑100
AGAGAACGTTATCGTGGGTCGTCTGATCCCGGCAGGTACCGGTTACGCGTACCACCAGGATCGTATGCGTCGCCGTGCTGCGGGTGAAGCTCCGGCTGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4189393‑4189492
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGACGCATCTGCCAGCCTGGCAGAACTGCTGAACGCAGGTCTGGGCGGTTCTGATAACGAGTAATCGTTAATCCGCAAATAACGTAAAAACCCGCTTCG > NC_000913/4189510‑4189608
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
