Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F380 I3 R1
|
13 |
150.7 |
7817698 |
91.1% |
7121922 |
99.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
3,968,900 |
IS5 (–) +4 bp |
coding (985‑988/1104 nt) |
wecA → |
UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
2288919 = | NA (NA) | 107 (0.720) |
72/196 |
1.3 |
100% |
noncoding (1195/1195 nt) |
IS5 |
repeat region |
| ? | NC_000913 |
= 3968903 |
0 (0.000) | coding (988/1104 nt) |
wecA |
UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase |
| * |
? |
NC_000913 |
= 3653230 | NA (NA) | 169 (1.130) |
93/196 |
0.2 |
100% |
noncoding (1/1195 nt) |
IS5 |
repeat region |
| ? | NC_000913 |
3968900 = |
0 (0.000) | coding (985/1104 nt) |
wecA |
UDP‑GlcNAc:undecaprenylphosphate GlcNAc‑1‑phosphate transferase |
Only 100 of 107 total aligned reads displayed.
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289007‑2288919
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAATC < NC_000913/3968903‑3968806
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAA < 2:227025/99‑1
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAA < 1:3000280/99‑1
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAA < 2:530740/99‑1
ATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAG > 1:2304110/1‑99
TTTACGGGAGAAAAAATCGTCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGGATTTCTCCGCTTATTCGCACCTTCCCTAGCAAAAAGA < 1:3512975/99‑1
TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGGTTATTCGCACCTTCCCTAGCAAAAAGA > 2:1428987/1‑99
TTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGA < 2:1050539/99‑1
TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAG < 1:2028147/99‑1
TTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAG > 2:1899180/1‑99
TACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGC < 2:923515/99‑1
CGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCAC < 1:588408/99‑1
GGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCA > 1:3053921/1‑99
GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAG > 1:1397073/1‑99
GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAG > 1:3321816/1‑99
GAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAAATTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAG > 2:3736442/1‑99
AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGC < 2:1361773/99‑1
AGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGC < 2:3711779/99‑1
AAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATG < 1:3804820/99‑1
AAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATG < 2:695344/99‑1
AAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGAC > 1:1249927/1‑99
AATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACC < 2:2747557/99‑1
ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCC < 1:95422/99‑1
ATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTACCTAGCAAAAAGAGCACCAGCATGACCC > 2:3794811/1‑99
CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCC > 2:2963733/1‑99
CTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCC < 2:1996594/99‑1
TCAAACATGAAGAAATGAACTGACTGAGTCAGCCGAGAAGCATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGAATGACCCACTCCG > 2:783592/1‑99
TCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCG > 1:2612593/1‑99
CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGG > 2:3668698/1‑99
CAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGG < 1:2811805/99‑1
AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAGAAAGAGCACCAGCATGACCCACTCCGGG > 1:3605870/1‑99
AAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGG > 1:1178151/1‑99
AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGA < 1:848011/99‑1
AACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGA < 1:682649/99‑1
CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACA > 1:3022034/1‑99
CATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACA > 2:463832/1‑99
TGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAA > 2:2198792/1‑99
GAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAA < 1:3822434/99‑1
AAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAAT < 1:1525665/99‑1
AGAAATGAAATGACTGAGTCAGCCGAGAAGACTTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATG > 1:751029/1‑99
AGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATG > 2:1189314/1‑99
GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGA < 1:120217/99‑1
GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGA < 1:2473195/99‑1
GAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGA < 1:2032716/99‑1
GAAATGAAATGACTGAGTCAGCCGAGAAGAATGTCCCCGCTTATTCGCCCCTTCCCTGGCAAAAAGACCACCAGCATGACCCACTCCGGGACAAAATGA < 1:2410807/99‑1
AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAG > 1:2431005/1‑99
AAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAG > 2:2179832/1‑99
ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAA > 1:748454/1‑99
ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAA > 1:2828114/1‑99
ATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCCTCCCTAGCAACAAGAGCACCAGCATGACCCCCTCCGGGCCAAAATGAGAA > 2:12822/1‑99
ATGAAATGACTGAGGCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAA < 2:3261072/99‑1
GAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATA > 2:3743235/1‑99
AAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATAT > 1:3763545/1‑99
ATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTC < 1:1723427/99‑1
GACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTG > 2:326868/1‑99
ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGC < 1:3197342/99‑1
ACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGC < 2:1453608/99‑1
CTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCC < 1:212324/99‑1
TGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCA > 1:547041/1‑99
AGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGC > 2:2920516/1‑99
GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCC > 2:3300039/1‑99
GCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCC > 2:3506043/1‑99
CCGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCA > 1:3809986/1‑99
CGAGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAA < 1:1368972/99‑1
AGAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATG > 2:2077307/1‑99
GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGG > 2:49916/1‑99
GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGG < 1:1552140/99‑1
GAAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGG > 2:3030358/1‑99
AAGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGA > 2:853685/1‑99
AGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCTGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAA < 2:2953519/99‑1
AGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAA < 2:481023/99‑1
AGAATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAA < 2:2552714/99‑1
AATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGC < 2:1508183/99‑1
ATTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCG < 1:2062468/99‑1
TTTCCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGA < 1:3758070/99‑1
CCCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCA > 2:1640787/1‑99
CCCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAG > 2:1073300/1‑99
CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGTATGACCCACTCCGCGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGACCAGT > 2:2956053/1‑99
CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCCATGGAAGCGAGCAGT > 2:2693690/1‑99
CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGT > 1:3547489/1‑99
CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGT > 2:3118966/1‑99
CCGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGT < 1:3102284/99‑1
CGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTG > 1:1966540/1‑99
CGCTTATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACGCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTG < 2:2042257/99‑1
CGCTTATTCGAACCTTCCCTAGCAAAAAGAGCACCAGCATGACACACACCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTG > 1:3470975/1‑99
ATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCG < 1:767464/99‑1
ATTCGCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCG < 2:2181121/99‑1
GCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAA < 1:2708854/99‑1
GCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAA > 2:2101691/1‑99
GCACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAA < 1:1374800/99‑1
GCACCNTCCCTAGCAAAAAGAGCACCAGCNTGACCCACTCCGGGACAAAATGAGAANATTCNGCCNGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAA < 1:797687/99‑1
CACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAG < 1:2250551/99‑1
ACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGG < 2:3038104/99‑1
ACCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGG < 2:2120832/99‑1
CCTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGG > 1:1829179/1‑99
CTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGT > 1:2571498/1‑99
CTTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGT > 1:1427888/1‑99
TTCCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTA > 1:3871577/1‑99
CCCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAAT > 1:564793/1‑99
CCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCCAGGGTAATC > 2:3438374/1‑99
CCTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAATC < 1:1374621/99‑1
CATTTACGGGAGAAAAAATCGGCTCAAACATGAAGAAATGAAATGACTGAGTCAGCCGAGAAGAATTTCCCCGCTTATTCGCACCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2289007‑2288919
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGCAAAAAGAGCACCAGCATGACCCACTCCGGGACAAAATGAGAATATTCTGCCAGCACGCCAATGGAAGCGAGCAGTGCTGCGGCAAGGGTAATC < NC_000913/3968903‑3968806
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
