Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I51 R1
|
223 |
69.9 |
1534784 |
95.1% |
1459579 |
214.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
243,021 |
T→G |
T95P (ACC→CCC) |
fadE ← |
acyl coenzyme A dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 243,021 | 0 | T | G | 100.0%
| 223.2
/ NA
| 72 | T95P (ACC→CCC) | fadE | acyl coenzyme A dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (29/43); total (29/43) |
GAAGAAACGATGCTCTTTAAGGTACGCCCACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGAT > NC_000913/242809‑243251
|
gaagaaACGATGCTTTTTAAGGTACGCCCACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAAAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCttctttct < 1:566566/236‑1 (MQ=255)
ctctTTAAGGTACGCCCACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACa > 1:741167/1‑236 (MQ=255)
gcaCGCCAACATCTCGCGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCa < 2:243284/234‑1 (MQ=255)
gTACGCCCACAACTCCGGCGGAAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCa < 1:135048/236‑1 (MQ=255)
gTACGCCACCAACCCCGTCGGCAGATCCGCCAGCTCATGGGTTATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCa < 2:741167/236‑1 (MQ=255)
tACGCCCACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCAt < 1:648722/236‑1 (MQ=255)
gCCCACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCTCGACAAtggcgggctca > 2:719107/1‑230 (MQ=255)
gCCCACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCAc > 1:166532/1‑236 (MQ=255)
gCCCACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCCGGGACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCCATCGCTTCCTTCTCA‑GTGCGCGTCATCggcggc > 2:218527/1‑231 (MQ=255)
gCCCACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGGTATGCAGCTTTTTCCAGTCCGGCTTGCCCCGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCACCAACCGCTTCTTTCTCA‑TAGCGCGACCTCGGCGGCATccc > 2:738832/1‑234 (MQ=255)
cccAGAACTCCGTCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAACCATTCGCCATCCGGCAGGCTTCTTCGACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCAc < 2:429163/235‑1 (MQ=255)
accACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCAc < 1:730719/234‑1 (MQ=255)
cTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGa < 1:209660/236‑1 (MQ=255)
ccGGGGGCAGTTCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGaaa < 1:719107/236‑1 (MQ=255)
cggcggCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCCATCGCTTCTTTCTCC‑GTGCGCGACATCGACGGGCTCAACCTACGGCAAc > 2:419965/1‑236 (MQ=255)
cggcggCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTTC‑GTGCGCGCCATCGGCGGCATCCCCTTACGGGAAc > 2:707453/1‑236 (MQ=255)
cggcggCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGGGCGGCATCGGCGGCATCACCTTACGGGAAc > 2:521429/1‑236 (MQ=255)
gCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATAcc < 1:214882/234‑1 (MQ=255)
ccAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGCAACCGCGCAATACCGgc > 1:762160/1‑236 (MQ=255)
cAGCTCATGGTTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGgcg < 1:638366/236‑1 (MQ=255)
cAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGCCATCGGCGGCATCCCCTTACCGGAACCGCCACATACCGgcg > 2:214882/1‑236 (MQ=255)
gctcagcTGTAAATGATTCGCATTCCGGCAGGCTTCTGCTCCCGGGCCGTCGAGACACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAatca < 2:367683/230‑1 (MQ=255)
gttaTCTGGAAATCATTCGCCATCCGGCAGGCTGCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAttcat < 1:546662/233‑1 (MQ=255)
tcgggAATTCGTTCCCCATCGGGCAGGCTTCTGCTGCCGGGCCATCGAGATACGCTTGCTCTGCGGACGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAatcat < 2:438851/229‑1 (MQ=255)
aaaTCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACg > 1:89507/1‑236 (MQ=255)
cATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTTTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCCGAAATCATCGACTTatccat > 1:639626/1‑230 (MQ=255)
aTTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTa > 1:438851/1‑229 (MQ=255)
gcgtcgggCAGGCTTCTCGTGCCGGGCCGTCGAGAACCGCTGGCTGTTGGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCGGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCa < 2:472397/230‑1 (MQ=255)
ccGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCCTCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCCCGACAAAACCGCGCCGGAAACATCCGCCTACGCAAAAGCGCCAAgg > 2:253851/1‑235 (MQ=255)
aGGCTGCTTCTACCGGGCAGTCGAGAAACGCTTGCTCTGCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTGTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAAt < 1:332454/236‑1 (MQ=255)
ttcctcTACCGGGCCGTCGAGAAACGGTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCGGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCa < 2:458218/236‑1 (MQ=255)
cttctACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCAc < 1:84449/235‑1 (MQ=255)
tctACCGGGCCGTCGAGAACCGCTTGCTCTGCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGa < 1:632967/235‑1 (MQ=255)
ccGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCCCCTTACGGAAACCGCGAAATACCGGCGCGGGAATCATCGACTTTCGCCTAAGGGCCAAGGTAAATGGCACGCGGaga > 2:84449/1‑234 (MQ=255)
ggCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATg > 1:749209/1‑236 (MQ=255)
gCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATc < 2:539214/154‑1 (MQ=255)
gCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATc > 1:539214/1‑154 (MQ=255)
ccGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGc > 1:362568/1‑236 (MQ=255)
tCGAGAACCGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCa < 1:743278/235‑1 (MQ=255)
gaAGCGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAgg < 1:10151/235‑1 (MQ=255)
gCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTAc > 1:730493/1‑235 (MQ=255)
gctgTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCT‑CCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGAc < 1:207790/233‑1 (MQ=255)
tCAGGCGCGGCTCCGGATAGTTATGCCGCTTTTTCCGGTCCTGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACca < 2:468255/235‑1 (MQ=255)
tCAGGCCCGGCTGCGGATGATAATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACca < 2:218811/235‑1 (MQ=255)
gCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCa < 2:749209/236‑1 (MQ=255)
gCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGATTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGc < 2:89507/235‑1 (MQ=255)
gttttacccAGTCCGGGTTGCCTTGGAACAAGTCGCCCTCCCACCAGGGGGGGCCCGCATCAATCGCTTCTTTCTCA‑GGGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTc < 2:356664/229‑1 (MQ=255)
ttttCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCCAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGGAACCACGCCGACCACAGACCAGCAACGCCCAGGGCGGCTGTACat > 2:508257/1‑235 (MQ=255)
ttttCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCACAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAAAGCCGAGGGCGGCTGTCCAg > 1:470885/1‑236 (MQ=255)
ttttCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGa > 2:543150/1‑168 (MQ=255)
ttttCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGa < 1:543150/168‑1 (MQ=255)
ttttCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAg > 1:472112/1‑236 (MQ=255)
ttttCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAAACCAGCAACGCCGACGGAGGCTggtccg > 2:749524/1‑231 (MQ=255)
ttttCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCACCCAGGTGGGGCCCGCATCAA‑CCCCTCCTTCTCAGGTCCCCACCATCGCCGGCACACCCTTCCGGAACCCCCGAAAACCCGCCCGGGAAATCATCGACTTACGCATAGGCGCAAGGTTAAATGGCCCAGGGATAATGGCCAGAGGCCCAGGTACCCACGCCGCCAACAGCCAAGCAACGCCGAGGGCGGCTGGCCac > 2:204717/1‑235 (MQ=255)
cAGTCGGGCTTGCCCTGGAACCAGTCTCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACAGCGGCGGCATCCCCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAg < 2:30381/236‑1 (MQ=255)
cAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAg < 2:730493/236‑1 (MQ=255)
cAGTCCGGCTTGCCCTGGAACAAGTCGCACTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTGTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAg < 1:334189/236‑1 (MQ=255)
tCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGTTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAg > 2:712972/1‑215 (MQ=255)
tCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCCGAGGCACCAGTAACCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCaa > 2:81605/1‑236 (MQ=255)
tCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAg < 1:712972/215‑1 (MQ=255)
cTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCa < 1:159622/236‑1 (MQ=255)
tGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGa < 1:218527/236‑1 (MQ=255)
cccTGGAACAATTGCGCCTCCCACCAGGTGCGACCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGAGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGAc < 2:639626/235‑1 (MQ=255)
cTGGAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGActgc < 2:362568/236‑1 (MQ=255)
ggAACAAGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGActgctg < 1:393793/236‑1 (MQ=255)
aGTCGCCCTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGGACCCACCCCGACCACAGACCAGCAACGCCGAGGGCGGCTTGCCAGGCGAGCCACATCAGaacgcggtgaaa > 2:393793/1‑224 (MQ=255)
ccTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGAct < 1:382445/220‑1 (MQ=255)
ccTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGAct > 2:382445/1‑220 (MQ=255)
ccTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCt < 1:293432/235‑1 (MQ=255)
cTCCCACCAGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCa < 1:419965/236‑1 (MQ=255)
cgcccaGGTCGGGCCCGCATCAATCGCTTCTTTCTCA‑ATGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAcgc < 2:470885/233‑1 (MQ=255)
ccaccaGGTGGGGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCAcgc < 1:253851/236‑1 (MQ=255)
ggtgggGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCCGGCCCGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGAt > 2:16988/1‑236 (MQ=255)
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GAAGAAACGATGCTCTTTAAGGTACGCCCACAACTCCGGCGGCAGATCCGCCAGCTCATGGGTGATCTGGAAATCATTCGCCATCCGGCAGGCTTCTTCTACCGGGCCGTCGAGAAACGCTTGCTCTTCGGCGGTCAGGCGCGGCTGCGGATAGTTATGCAGCTTTTTCCAGTCCGGCTTGCCCTGGAACAAGTCGCCCTCCCACCAGGTGGTGCCCGCATCAATCGCTTCTTTCTCA‑GTGCGCGACATCGGCGGCATCACCTTACGGAAACCGCGAAATACCGGCGCGGAAATCATCGACTTACGCATAGGCGCAAAGTTAAATGGCACGAGGATAATGGCCAGAGGCACCAGTACCCACGCCGACCACAGACCAGCAACGCCGAGGGCGGCTGTCCAGGCGAGCAAAATCAGACTGCTGATAAATAAGCTCACGCGGTGAT > NC_000913/242809‑243251
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
