Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,290,933 |
T→G |
L231R (CTT→CGT) |
rssB → |
PcnB‑degradosome interaction factor; response regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,290,933 | 0 | T | G | 99.1%
| 762.6
/ ‑6.0
| 214 | L231R (CTT→CGT) | rssB | PcnB‑degradosome interaction factor; response regulator |
| Reads supporting (aligned to +/- strand): ref base T (1/1); new base G (118/93); total (119/95) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 214 total aligned reads displayed.
GCATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCT > NC_000913/1290836‑1291029
|
cATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGc > 1:1171994/1‑100 (MQ=255)
cATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGc < 1:1878658/100‑1 (MQ=255)
cATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGc > 1:3757599/1‑100 (MQ=255)
ttttATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGcac < 2:3691611/100‑1 (MQ=255)
ttttATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGcac < 1:4782372/100‑1 (MQ=255)
tttATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGcaca > 1:138439/1‑100 (MQ=255)
ttATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCacac > 1:497355/1‑100 (MQ=255)
tATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACAcc < 2:2781819/100‑1 (MQ=255)
tATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACAcc > 1:642884/1‑100 (MQ=255)
aTTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCa > 2:3393736/1‑100 (MQ=255)
gCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCaaaa < 1:2790534/100‑1 (MQ=255)
ccTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAAt > 2:2687829/1‑100 (MQ=255)
ccTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAAt < 2:2333541/100‑1 (MQ=255)
ccTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAAt < 1:3182030/100‑1 (MQ=255)
ccTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAAt > 2:4424048/1‑100 (MQ=255)
cTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATc > 1:5486235/1‑100 (MQ=255)
gATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAAc < 2:2276225/100‑1 (MQ=255)
gATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATGACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAAc < 1:5164424/100‑1 (MQ=255)
gTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGt > 1:887192/1‑100 (MQ=255)
gTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGt < 2:1283953/100‑1 (MQ=255)
cACCCGAGCTGGACATAATGGCGTATTTGCTGCCTTGTTATTACGCGGATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTg > 1:4986149/1‑100 (MQ=255)
cACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTg > 1:3266367/1‑100 (MQ=255)
cACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTg > 2:2055798/1‑100 (MQ=255)
cACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTg > 1:1093874/1‑100 (MQ=255)
cACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTg < 1:3427025/100‑1 (MQ=255)
aCCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGc < 1:4644421/100‑1 (MQ=255)
cccGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGcn < 1:293927/100‑2 (MQ=255)
cccGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGcc < 2:90871/100‑1 (MQ=255)
cGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCag < 1:3280385/100‑1 (MQ=255)
aGCTGGACATAATGGCGTACTTGCTGCCTGGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCagag < 1:3335144/100‑1 (MQ=255)
cTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGtt < 1:97344/100‑1 (MQ=255)
tGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTg > 2:4089384/1‑100 (MQ=255)
cATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGgcg > 1:2602197/1‑100 (MQ=255)
aTAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGgcgc > 2:5493564/1‑100 (MQ=255)
naaTGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCCAAATCCACGGTTGCCACAGTTgcgcgcc > 1:1649972/2‑99 (MQ=255)
aTGGCGTACTTGCTGCGTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGtt < 1:2374647/100‑1 (MQ=255)
aTGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGtt > 2:4267296/1‑100 (MQ=255)
aTGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGtt < 1:2077885/100‑1 (MQ=255)
aTGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGtt > 1:2752869/1‑100 (MQ=255)
ggCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTAt < 1:3746210/100‑1 (MQ=255)
ggCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTAt > 1:1926795/1‑100 (MQ=255)
gCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTAtt < 1:3864311/100‑1 (MQ=255)
gCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTAtt > 1:4628709/1‑100 (MQ=255)
gCGTACTTGCTGCCGTGTTATTACGGGCATTGTTTAACGGGTTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTAtt < 2:2468494/100‑1 (MQ=255)
cGTACTTGCTGCCTTGTTATGACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGGTTGGCGCGTTATTg > 2:3186403/1‑100 (MQ=255)
gTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGa < 2:2353229/100‑1 (MQ=255)
aCTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACCGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTACTGAAg > 2:2132587/1‑100 (MQ=255)
aCTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAg < 1:3927102/100‑1 (MQ=255)
aCTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAg < 2:4801593/100‑1 (MQ=255)
aCTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAg > 2:4365312/1‑100 (MQ=255)
cTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGTGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGc > 2:818155/1‑100 (MQ=255)
cTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGc > 2:1081362/1‑100 (MQ=255)
ttGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCa < 2:4193976/100‑1 (MQ=255)
tgctgcCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAg < 1:2515954/100‑1 (MQ=255)
gctgcCTTGTTATTACGCGTATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAgg < 2:4916549/100‑1 (MQ=255)
ctgcCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGt > 2:4625356/1‑100 (MQ=255)
ctgcCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGt < 2:76135/100‑1 (MQ=255)
ctgcCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGt < 1:15326/100‑1 (MQ=255)
nccTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTaa > 1:176069/2‑100 (MQ=255)
ccTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTaaa > 1:1341253/1‑100 (MQ=255)
tattaCGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCAttt > 2:1478033/1‑100 (MQ=255)
attaCGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTa > 2:2456282/1‑100 (MQ=255)
ttaCGCGCATTGTTTAACGGATTATTACATGAACAGCGTGCACACCAAAATCAACGGTTACTAAAGTTGGGCGCGTTATTTAAGCAGGTAAACCATTTAc > 2:1673691/1‑100 (MQ=255)
ttaCGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTAc > 2:1672621/1‑100 (MQ=255)
taCGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACt < 1:1699732/100‑1 (MQ=255)
aCGCGCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACtt > 1:3550728/1‑100 (MQ=255)
cgcgCATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTc < 2:172612/100‑1 (MQ=255)
cgcgCATTGTTTAACGGATAAATACAGGAACAGCGTGCACACGAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTc > 1:4743740/1‑100 (MQ=255)
gcgcATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCg < 1:4365424/100‑1 (MQ=255)
ngcATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGt > 1:4422399/2‑100 (MQ=255)
cgcATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGt > 2:4511832/1‑100 (MQ=255)
gcATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTc < 1:3839801/100‑1 (MQ=255)
cATTGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCa < 1:371107/100‑1 (MQ=255)
ttGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAgg > 2:4895255/1‑100 (MQ=255)
tGTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGTTTGCCAGAGTTGGGCGCGGTATTGAAGCAGGTAAACCATTTAGTTCGTCAGGc < 2:5071576/100‑1 (MQ=255)
gTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGcc > 1:4158110/1‑100 (MQ=255)
gTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGcc > 1:285699/1‑100 (MQ=255)
gTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGcc < 2:537957/100‑1 (MQ=255)
gTTTAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGcc > 1:666206/1‑100 (MQ=255)
tAACGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAAt > 1:4310450/1‑100 (MQ=255)
aaCGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATc > 1:2920221/1‑100 (MQ=255)
aaCGGATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATc > 1:5321419/1‑100 (MQ=255)
gATTATTACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGcc < 1:2333226/100‑1 (MQ=255)
gATTATTACAGGAACAGCGGGCACACCAAAATCAACGGGTGCCAGAGTTGCGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCGGGCCAAGCTGcc < 2:5283492/100‑1 (MQ=255)
attattACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCg > 2:144336/1‑100 (MQ=255)
attattACAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGCGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCg < 2:5412894/100‑1 (MQ=255)
ttattaCAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCgg > 2:1171797/1‑100 (MQ=255)
ttattaCAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCgg < 1:3294697/100‑1 (MQ=255)
ttattaCAGGAACAGCGTGCACACCAAAATCAACGGTTGACAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCAAATCTGACgg < 2:255523/100‑1 (MQ=255)
attaCAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCgggg > 2:1338115/1‑100 (MQ=255)
ttaCAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGc > 1:1409020/1‑100 (MQ=255)
taCAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCa > 2:1785468/1‑100 (MQ=255)
aCAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAg > 1:2643707/1‑100 (MQ=255)
aCAGGAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAg > 2:1955015/1‑100 (MQ=255)
ggAACGGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGttt > 2:4831222/1‑100 (MQ=255)
ggAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGttt > 1:766192/1‑100 (MQ=255)
ggAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGttt > 2:3303188/1‑100 (MQ=255)
gAACAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTc > 2:2954212/1‑100 (MQ=255)
aCAGCGTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCg > 2:349397/1‑100 (MQ=255)
cAGCGTGCACACCATAATCAACGGTTGCCAGAGTTGGGTGTGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCgt < 2:5030810/100‑2 (MQ=255)
|
GCATTTTATTGCCTTGATGTCACCCGAGCTGGACATAATGGCGTACTTGCTGCCTTGTTATTACGCGCATTGTTTAACGGATTATTACAGGAACAGCTTGCACACCAAAATCAACGGTTGCCAGAGTTGGGCGCGTTATTGAAGCAGGTAAACCATTTACTTCGTCAGGCCAATCTGCCGGGGCAGTTTCCGCT > NC_000913/1290836‑1291029
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
