Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,185,875 |
(G)7→8 |
intergenic (‑79/‑42) |
rcnR ← / → rcnA |
transcriptional repressor of rcnA/membrane protein conferring nickel and cobalt resistance |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,185,868 | 1 | . | G | 90.2%
| 327.4
/ 28.4
| 103 | intergenic (‑72/‑49) | rcnR/rcnA | transcriptional repressor of rcnA/membrane protein conferring nickel and cobalt resistance |
| Reads supporting (aligned to +/- strand): ref base . (4/6); new base G (88/4); total (92/11) |
| Fisher's exact test for biased strand distribution p-value = 2.83e-05 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 129 total aligned reads displayed.
TCTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑GG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCA > NC_000913/2185769‑2185965
|
tCTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTGAACAAGAATTTGATAAATCATAGCACTATTAATCTACTGGGGGATAGTATCAGGTACt < 1:4892414/100‑1 (MQ=255)
cTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑g < 1:1509585/100‑1 (MQ=255)
tGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg > 2:4783653/1‑100 (MQ=255)
tGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg < 2:2821435/100‑1 (MQ=255)
gTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGCAAAATCATAGCACTATTGATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g > 1:5304962/1‑100 (MQ=255)
gTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g < 2:3737835/100‑1 (MQ=255)
gTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g < 1:2436788/100‑1 (MQ=255)
atttAACACGCATTGAATGAGACATGGCAACACCTTGTTAAAAAAAAAAAGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g < 2:908339/99‑1 (MQ=255)
tttATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATGTGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑g > 2:1557044/1‑100 (MQ=255)
tttATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAAAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑g < 2:3538352/100‑1 (MQ=255)
ttATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg > 1:1319076/1‑100 (MQ=255)
ttATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg < 2:314367/100‑1 (MQ=255)
tATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑g > 2:415146/1‑100 (MQ=255)
tATCACGGATTGTATGAGACATAGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑g < 2:5015847/100‑1 (MQ=255)
tATCACGGATTGTATGAGAAATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑g < 1:4223620/100‑1 (MQ=255)
aTCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑gg > 2:5378584/1‑100 (MQ=255)
cACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑ggga > 2:5051191/1‑98 (MQ=255)
aCGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑gggag > 1:1522292/1‑97 (MQ=255)
cGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑gggagt > 1:5571285/1‑96 (MQ=255)
ggATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTTCTGGGGGGTAGTATCAGGTACT‑GG‑G‑GG‑GG‑AGTAg < 2:5290162/100‑1 (MQ=255)
ggATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑gg‑g‑gg‑gggagta > 1:5015434/1‑95 (MQ=255)
gATTGTATGGTACGTGACAACACCTTGTCAACAAGAAGATGAAAAATCATAGCACTATTAAGCTACTGGGGGGAAGTATCTGGTACTGGG‑G‑GG‑GG‑AGTAg < 2:3985126/100‑1 (MQ=255)
ttGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGaa > 2:5480362/1‑100 (MQ=255)
gTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATc > 2:3191704/1‑100 (MQ=255)
gTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATc > 2:2243934/1‑100 (MQ=255)
tATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCa > 1:2665650/1‑100 (MQ=255)
aTGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAg > 1:962200/1‑100 (MQ=255)
tGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑CGTAGAATCAGa > 1:2765929/1‑100 (MQ=255)
tGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGa > 1:3806055/1‑100 (MQ=255)
tGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGa > 1:2837413/1‑100 (MQ=255)
gagaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAt > 2:1985469/1‑100 (MQ=255)
gagaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAt > 2:4594636/1‑100 (MQ=255)
gagaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAt > 1:239261/1‑100 (MQ=255)
agaCATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAtt > 1:5168030/1‑100 (MQ=255)
cATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGcc > 1:4009409/1‑100 (MQ=255)
cATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGcc > 1:1128172/1‑100 (MQ=255)
cATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGcc > 2:1401935/1‑100 (MQ=255)
aTGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCg > 2:1387481/1‑100 (MQ=255)
aTGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGCAGAATCAGATTGCCg > 1:5564019/1‑100 (MQ=255)
tGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGa > 1:3714265/1‑100 (MQ=255)
agCAAAACCTGGTTAACAAGAGTATGAAAATTCATGCCACTATTAAGCTTCTGGGGGGTAGTATGTGGTAGT‑GG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAAt < 1:3126276/99‑1 (MQ=255)
gCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAAt > 1:1979973/1‑100 (MQ=255)
gCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAAt > 1:3904357/1‑100 (MQ=255)
cacCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAAt > 1:2208095/1‑100 (MQ=255)
cacCTGGTTAACAAGAAGATGAAAAATCATATCATTATTATTCTACTGGGGGATAGTATCAGGGACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAAt < 2:4348656/100‑1 (MQ=255)
ccTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATAc > 2:1596671/1‑100 (MQ=255)
cTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACt > 2:4245086/1‑100 (MQ=255)
cTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACt > 1:2373237/1‑100 (MQ=255)
gTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAg > 2:3946984/1‑100 (MQ=255)
aCAAGAATATGAAACATCATAGAACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑GG‑G‑GGAGGAAGAAGAATCAGATTGCCGAATTCCTGCTAAAAat > 2:530553/1‑100 (MQ=255)
cAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAatta > 1:5286936/1‑100 (MQ=255)
aaGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattat > 1:3010819/1‑100 (MQ=255)
aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattatt > 2:1830506/1‑100 (MQ=255)
aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattatt > 1:994531/1‑100 (MQ=255)
aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattatt > 2:2902402/1‑100 (MQ=255)
aGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAattatt > 2:4292794/1‑100 (MQ=255)
agatGAAAAATCATAGTACTAGTAGCGGAAGTGGGGTTAGTATCAGGTACTAGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATc < 2:1545403/98‑1 (MQ=255)
tGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATg < 1:843480/100‑1 (MQ=255)
gAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGa > 1:1817286/1‑100 (MQ=255)
aaaaaTCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGAc > 2:3897017/1‑100 (MQ=255)
aTAGCACTATTAATCTACTGGGGGGTATTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGAGTGCCGAATTAATACTAAGAATTATTATCATGACCGAAttt > 1:4914565/1‑100 (MQ=255)
aTAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAttt > 1:1964471/1‑100 (MQ=255)
aTAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAAttt > 2:1980612/1‑100 (MQ=255)
tAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTa > 2:670871/1‑100 (MQ=255)
gCACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACa > 1:3291937/1‑100 (MQ=255)
cACTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACaa > 2:862681/1‑100 (MQ=255)
aCTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAc > 2:1826497/1‑100 (MQ=255)
cTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAct > 1:4041883/1‑100 (MQ=255)
cTATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAAct > 2:49603/1‑100 (MQ=255)
tATTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActc > 1:1084946/1‑100 (MQ=255)
aTTAATCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAActct > 2:2170135/1‑100 (MQ=255)
aTCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTcttctt > 2:5397912/1‑100 (MQ=255)
aTCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTcttctt > 2:3989228/1‑100 (MQ=255)
aTCTACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTcttctt > 1:1640877/1‑100 (MQ=255)
tACTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAg > 2:3668071/1‑100 (MQ=255)
cTGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCttcttcttgt > 1:1049311/1‑96 (MQ=255)
tGGGGGGTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCaa > 1:675936/1‑100 (MQ=255)
gggggTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAgg > 1:4553254/1‑100 (MQ=255)
ggggTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGa > 2:3164629/1‑100 (MQ=255)
cggttagttTCAAGTACA‑GG‑GTGG‑TA‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGa < 2:1243275/96‑1 (MQ=255)
gggTAGTATCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGaa > 2:1856844/1‑100 (MQ=255)
gggTAGTATCAGGTACT‑GGTG‑GG‑GG‑CGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCATCTTCAGCAAGGaa > 2:5024930/1‑100 (MQ=255)
gtagtaTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAAc > 2:4012551/1‑100 (MQ=255)
agtaTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGc > 2:2060869/1‑100 (MQ=255)
gtaTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGcc > 2:1181638/1‑100 (MQ=255)
gtaTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGcc > 1:1949084/1‑100 (MQ=255)
taTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCt > 2:783683/1‑100 (MQ=255)
aTCATGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTg > 1:2718333/1‑100 (MQ=255)
aTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTg > 2:3501029/1‑100 (MQ=255)
aTCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTg > 2:3380239/1‑100 (MQ=255)
tCAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTgg > 2:2412626/1‑100 (MQ=255)
cAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCGGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGt > 2:74173/1‑100 (MQ=255)
cAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGt > 1:1222756/1‑100 (MQ=255)
cAGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGt > 2:2923108/1‑100 (MQ=255)
aGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGtt > 2:2543883/1‑100 (MQ=255)
aGGTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGtt > 2:4094335/1‑100 (MQ=255)
ggTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGttc > 1:321985/1‑100 (MQ=255)
gTACTGGG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGttct > 2:1638881/1‑100 (MQ=255)
tgt‑GG‑G‑GG‑GA‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCa < 1:2007141/98‑1 (MQ=255)
gtt‑GG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCa < 1:3511764/98‑1 (MQ=255)
|
TCTGTTTATCACGGATTGTATGAGACATGGCAACACCTGGTTAACAAGAATATGAAAAATCATAGCACTATTAATCTACTGGGGGGTAGTATCAGGTACT‑GG‑G‑GG‑GG‑AGTAGAATCAGATTGCCGAATTAATACTAAGAATTATTATCATGACCGAATTTACAACTCTTCTTCAGCAAGGAAACGCCTGGTTCTTCA > NC_000913/2185769‑2185965
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
