Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,288,707 |
T→G |
pseudogene (208/2525 nt) |
yejO ← |
pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,288,707 | 0 | T | G | 99.0%
| 670.0
/ ‑2.8
| 193 | pseudogene (208/2525 nt) | yejO | pseudogene, autotransporter outer membrane homology;putative transport; Not classified; putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base T (2/0); new base G (105/86); total (107/86) |
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.03e-01 |
Only 100 of 194 total aligned reads displayed.
TGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGAT > NC_000913/2288610‑2288803
|
tGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCt < 2:4028525/100‑1 (MQ=255)
gcgcCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTg > 1:3851408/1‑100 (MQ=255)
cgcCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTAtgctgc > 2:952177/1‑100 (MQ=255)
gcCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTgcg > 2:3074050/1‑100 (MQ=255)
ccATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTgcgg > 2:978294/1‑100 (MQ=255)
ccATAAAACTGTAGCACACCATTATTGAGCGTAGTGTGGTTTGCGGCGTCACCCCCTTGCACAATATGATAAGCGTCATTTAATACTGAGTATGCTgtgg > 2:5246282/1‑100 (MQ=255)
cATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTgcggc > 1:1141772/1‑100 (MQ=255)
tAAAGCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCAGCGCCACACATTTGAACAATTTGATAACGGTGATTTACTACTGCGTATGCTGCGgcgc > 2:5227894/1‑100 (MQ=255)
aaaCCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGcc > 1:10526/1‑100 (MQ=255)
aaaCCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGcc < 2:3297769/100‑1 (MQ=255)
aaCCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCca < 1:2560911/100‑1 (MQ=255)
tGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCcattca < 1:4034342/100‑1 (MQ=255)
tGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCcattca < 2:5358435/100‑1 (MQ=255)
gTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCcattcat > 1:3645976/1‑100 (MQ=255)
aGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCcattcattn < 1:4416168/100‑2 (MQ=255)
gCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTc < 2:115184/100‑1 (MQ=255)
gCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTc > 2:3247247/1‑100 (MQ=255)
acacCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCaa < 1:4780416/100‑1 (MQ=255)
cacCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGCTAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAAt < 1:4978020/100‑1 (MQ=255)
cacCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAAt < 2:4487021/100‑1 (MQ=255)
acCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATg > 2:267034/1‑100 (MQ=255)
ccATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGt > 2:4985600/1‑100 (MQ=255)
ccATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGt < 2:1508538/100‑1 (MQ=255)
ccATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGt > 1:2513749/1‑100 (MQ=255)
ccAGTATTGAGCGTAGTCTGGGTAGCCGCGCCACCCATTTGAACAATTTGATGACCGTCAATTAATACTGAGTATGCTGCGGCGCCAGTCAATTCAATGt > 2:389306/1‑100 (MQ=255)
ttGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGAt > 2:2606377/1‑100 (MQ=255)
tGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATa > 2:2985296/1‑100 (MQ=255)
gAGCGTAGTCTGGTTTGGCGCGCCACACATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCAATTCATTTCAATGTACTGATat > 2:1043759/1‑99 (MQ=255)
gAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATAc < 2:4541418/100‑1 (MQ=255)
gAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATAc > 2:2734302/1‑100 (MQ=255)
ngCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATAcc > 1:4448318/2‑100 (MQ=255)
gCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATAccc < 1:2079497/100‑1 (MQ=255)
gCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATAccc > 2:4435311/1‑100 (MQ=255)
gTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGt > 1:4249394/1‑100 (MQ=255)
gTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGt > 2:86705/1‑100 (MQ=255)
gTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGt < 1:4300087/100‑1 (MQ=255)
tCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGtt < 1:2632035/100‑1 (MQ=255)
cTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCACTGTACTGATACCCTCCGTTa > 1:525494/1‑100 (MQ=255)
cTGGTCTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCTATTCATTTCAATGTACAGATACCCTCCGTTa > 2:4844839/1‑100 (MQ=255)
ggTTTGCCTCGCCACCCATTTGAACAAGTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAAt < 2:677283/100‑1 (MQ=255)
ggTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAAt > 1:698519/1‑100 (MQ=255)
ggTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAAt > 2:1928402/1‑100 (MQ=255)
gTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAAtt > 1:997752/1‑100 (MQ=255)
gTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAAtt > 2:4878908/1‑100 (MQ=255)
tttGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAAttt > 1:1083929/1‑100 (MQ=255)
ttGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCGTTTCAATGTACTGATACCCTCCGTTAATTTc < 1:2725615/100‑1 (MQ=255)
ttGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTc < 2:4088997/100‑1 (MQ=255)
ttGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTc < 2:1677608/100‑1 (MQ=255)
tGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCa < 1:3001210/100‑1 (MQ=255)
tGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCa > 1:4281605/1‑100 (MQ=255)
gCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAg < 1:879391/100‑1 (MQ=255)
ccGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGt < 1:1627380/100‑1 (MQ=255)
ccGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGt < 2:338488/100‑1 (MQ=255)
ccGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGt > 2:2693173/1‑100 (MQ=255)
ccGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGt > 1:4616074/1‑100 (MQ=255)
cgcgCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGta > 1:56033/1‑100 (MQ=255)
cgcgCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGta < 2:1584916/100‑1 (MQ=255)
gcCACCCATTTGAACAATTTGATCACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCAGTTAATTTCAGtatta > 2:4603345/1‑100 (MQ=255)
gcCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGtatta > 1:2283398/1‑100 (MQ=255)
ccACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGtattat < 1:4207722/100‑1 (MQ=255)
ccACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGATAATTTCAGtattat < 2:4187882/100‑1 (MQ=255)
ccATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTAttact < 1:3456549/100‑1 (MQ=255)
tttGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTAttacttac > 2:3305664/1‑100 (MQ=255)
tttaaCAATTTGATAACCGTCCTTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTCCTTTCAGTATTATTACTTaca > 2:3510038/4‑100 (MQ=255)
ttGAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTaca < 1:5091361/100‑1 (MQ=255)
gAACAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACAcc > 2:2397760/1‑100 (MQ=255)
gAACAATTTGATAACCGTCATTTAATACCGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACAcc < 1:5573593/100‑1 (MQ=255)
gAACAATTTGATAACCCTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTCCAGTATTATTACTTCCAcc < 2:1346440/100‑1 (MQ=255)
aaCGATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCa < 2:2476378/100‑1 (MQ=255)
aaCAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCa > 1:5302353/1‑100 (MQ=255)
aaCAATTTGATAACCGGCATTTAATAGTGAGTATGCTGCGGCGCCATTCATTTCAATGGACTGATACCCTCCGTTACTTTCATTATTATTACTTACACCa > 2:2512230/1‑100 (MQ=255)
aCAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCaa > 1:3735728/1‑100 (MQ=255)
cAATTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCaaa > 1:2596257/1‑100 (MQ=255)
aaattGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAAt < 1:330955/97‑1 (MQ=255)
aTTTGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAAtt > 1:4495819/1‑100 (MQ=255)
ttGATAACCCTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATCCt > 1:5434368/1‑100 (MQ=255)
tGATAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCtt > 1:1792882/1‑100 (MQ=255)
tAACCGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTta > 1:5155408/1‑100 (MQ=255)
ccGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTatat > 2:4993409/1‑100 (MQ=255)
cGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATg > 1:2909278/1‑100 (MQ=255)
cGTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATg < 1:3213520/100‑1 (MQ=255)
gTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGc < 2:5090326/100‑1 (MQ=255)
gTCATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGc < 2:4737682/100‑1 (MQ=255)
cATTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTg < 1:4478857/100‑1 (MQ=255)
aTTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGt > 1:2175322/1‑100 (MQ=255)
aTTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGt > 2:2786989/1‑100 (MQ=255)
aTTTAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCCCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGt > 2:1011389/1‑100 (MQ=255)
tAATACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCACATTCTTTTATATGCTGTtct < 1:4338776/100‑1 (MQ=255)
tACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCg < 1:3183875/100‑1 (MQ=255)
tACTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCg > 2:4247492/1‑100 (MQ=255)
cTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGcc > 2:2180650/1‑100 (MQ=255)
cTGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGcc > 2:1437081/1‑100 (MQ=255)
tGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCa > 2:2136035/1‑100 (MQ=255)
tGAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCa > 1:1886827/1‑100 (MQ=255)
gAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAg < 1:613712/100‑1 (MQ=255)
gAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAg > 1:5407956/1‑100 (MQ=255)
gAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAg < 2:3816134/100‑1 (MQ=255)
gAGTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAg < 2:3174912/100‑1 (MQ=255)
gTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAggc > 1:1727994/1‑99 (MQ=255)
gTATGCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGga > 1:2189242/1‑100 (MQ=255)
|
TGCGCCATAAACCTGTAGCACACCATTATTGAGCGTAGTCTGGTTTGCCGCGCCACCCATTTGAACAATTTGATAACCGTCATTTAATACTGAGTATTCTGCGGCGCCATTCATTTCAATGTACTGATACCCTCCGTTAATTTCAGTATTATTACTTACACCAAATTCTTTTATATGCTGTTCTCCGCCAGGAT > NC_000913/2288610‑2288803
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
