Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,307,348 |
T→G |
Q423P (CAA→CCA) |
yojI ← |
microcin J25 efflux ABC transporter permease/ATPase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,307,348 | 0 | T | G | 97.2%
| 749.1
/ 5.2
| 218 | Q423P (CAA→CCA) | yojI | microcin J25 efflux ABC transporter permease/ATPase |
| Reads supporting (aligned to +/- strand): ref base T (3/3); new base G (93/119); total (96/122) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.38e-01 |
Only 100 of 218 total aligned reads displayed.
TTTCTGCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTT > NC_000913/2307251‑2307444
|
tttCTGCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGc < 1:1281654/100‑1 (MQ=255)
ttCTGCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCg > 1:3394337/1‑100 (MQ=255)
ttCTGCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCg > 1:2522629/1‑100 (MQ=255)
tttGCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAGCTCAATCTTATGAGCCATTTTCAGCTCCGCCAGACACTTCTCAACCAGTGGCgg < 2:5475692/98‑1 (MQ=255)
cTGCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCggg < 1:855007/100‑1 (MQ=255)
tGCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGt > 2:2878607/1‑100 (MQ=255)
tGCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGt > 2:2531901/1‑100 (MQ=255)
gCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGtt < 1:3194565/100‑1 (MQ=255)
ccTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAg > 1:2991726/1‑100 (MQ=255)
cTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGc < 1:5030325/100‑1 (MQ=255)
ttttGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCg < 1:1722877/100‑1 (MQ=255)
ttttGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCg < 2:2053260/100‑1 (MQ=255)
ttttGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCg > 2:4491410/1‑100 (MQ=255)
ttttGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCAATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCg < 1:5225042/100‑1 (MQ=255)
tttGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCgg < 1:5506489/100‑1 (MQ=255)
ttGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCggg > 2:64680/1‑100 (MQ=255)
tGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGt < 1:1171890/100‑1 (MQ=255)
tGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGt < 1:4256912/100‑1 (MQ=255)
tGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGt > 1:2466613/1‑100 (MQ=255)
gATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGtt > 2:4897390/1‑100 (MQ=255)
ttAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGttt < 1:1222151/99‑1 (MQ=255)
tAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTa < 2:4408359/100‑1 (MQ=255)
tAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTa > 1:4857798/1‑100 (MQ=255)
tAACTTAAGGTTACCAATACGCCCGTTGCTTAACTAAAGCTTATGCGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTa < 2:1625485/100‑1 (MQ=255)
aaCTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTAc < 2:3009378/100‑1 (MQ=255)
aaCTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTAc < 1:3315740/100‑1 (MQ=255)
cTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTAccc > 1:1399831/1‑100 (MQ=255)
cTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTAccc > 1:997589/1‑100 (MQ=255)
cAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTcc < 2:1920200/100‑1 (MQ=255)
cAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTcc > 1:4399921/1‑100 (MQ=255)
cAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTcc > 1:4628250/1‑100 (MQ=255)
aGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCg > 2:3483205/1‑100 (MQ=255)
gTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGc > 1:641807/1‑100 (MQ=255)
gTTAACAATACGCCCGTTGCTGAACGCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTGTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGc < 2:5152746/100‑1 (MQ=255)
tAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGccc > 2:3922859/1‑100 (MQ=255)
aCAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCca < 2:1900453/100‑1 (MQ=255)
aCAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCca > 2:1113018/1‑100 (MQ=255)
aaTACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCcagc < 1:530324/100‑1 (MQ=255)
aTACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCcagca > 2:1406654/1‑100 (MQ=255)
cGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGtt > 2:1121326/1‑100 (MQ=255)
cGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGtt > 1:3224522/1‑100 (MQ=255)
gCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTg < 2:3939287/100‑1 (MQ=255)
ccGTTGCTTAACTCGAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGAt < 2:86168/100‑1 (MQ=255)
ccGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGNGGGTTTACCCTCCGGCCCCAGCANTTGAt > 1:659468/1‑100 (MQ=255)
ccGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGAt < 2:2446600/100‑1 (MQ=255)
ccGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGAt < 1:1766045/100‑1 (MQ=255)
cGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATc < 1:2418428/100‑1 (MQ=255)
cGTGGCTTAACTCAAGGTTATGAGCCAGTTTCAGCGGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATc < 1:409294/100‑1 (MQ=255)
ttGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCaa < 1:5110874/100‑1 (MQ=255)
ttGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCaa < 2:38111/100‑1 (MQ=255)
ttGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCaa < 2:4962609/100‑1 (MQ=255)
tGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCaaa > 2:4584833/1‑100 (MQ=255)
tGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCaaa < 1:2400878/100‑1 (MQ=255)
ttACCTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAg < 1:3067921/100‑1 (MQ=255)
tAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGc > 1:1121156/1‑100 (MQ=255)
aaCTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGcc < 1:4110970/100‑1 (MQ=255)
cTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAg < 2:2143539/100‑1 (MQ=255)
aaGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACa < 2:3757851/100‑1 (MQ=255)
ttATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCgg < 2:3194462/100‑1 (MQ=255)
tATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGt < 2:3362819/100‑1 (MQ=255)
tATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGt > 2:4105248/1‑100 (MQ=255)
aTGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTa < 1:655105/100‑1 (MQ=255)
tGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTaa > 1:5006415/1‑100 (MQ=255)
gAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTaaa < 2:953138/100‑1 (MQ=255)
gAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTaaa < 1:1463140/100‑1 (MQ=255)
aGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAac < 2:1783751/100‑1 (MQ=255)
aGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAac < 1:217631/100‑1 (MQ=255)
gCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAaca > 1:90445/1‑100 (MQ=255)
cATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACt > 1:2331435/1‑100 (MQ=255)
aTTTTCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTg > 1:399853/1‑100 (MQ=255)
ttCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCg < 2:5042669/100‑1 (MQ=255)
tCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGa < 1:2647193/100‑1 (MQ=255)
tCAGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGa > 2:4351912/1‑100 (MQ=255)
aGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGaaa < 2:2770986/100‑1 (MQ=255)
aGCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGaaa > 2:4695219/1‑100 (MQ=255)
gCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGaaaa > 2:4080142/1‑100 (MQ=255)
gCTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCACAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGaaaa < 2:4789964/100‑1 (MQ=255)
cTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAAc > 1:1011273/1‑100 (MQ=255)
cTGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAAc < 1:106268/100‑1 (MQ=255)
tGCGCCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACa > 1:1550963/1‑100 (MQ=255)
gcgcCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAg < 2:4286979/100‑1 (MQ=255)
cgcCAGCCACTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGt < 1:5155696/100‑1 (MQ=255)
gccagccaCTTCTCAACCAGTGGCTGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGtt < 2:4139515/100‑1 (MQ=255)
agccaCTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGc < 1:3615902/100‑1 (MQ=255)
gccaCTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCg > 1:2818526/1‑100 (MQ=255)
gccaCTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAACAGTTGATCAAACAACCAGACATCGGCACCCACTGCCGAAAACAGTTTGCg > 2:3975227/1‑100 (MQ=255)
ccaCTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGa > 2:3245899/1‑100 (MQ=255)
caCTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGAt < 1:4212450/100‑1 (MQ=255)
caCTTCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGAt > 1:5163186/1‑100 (MQ=255)
ttCTCAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGaagat > 2:120315/1‑96 (MQ=255)
tctcAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATc > 2:359156/1‑100 (MQ=255)
cAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTc > 2:2606715/1‑100 (MQ=255)
cAACCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTc > 2:2402710/1‑100 (MQ=255)
aaCCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTcc < 1:4142674/100‑1 (MQ=255)
aCCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCg > 1:2534713/1‑100 (MQ=255)
aCCAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCg > 1:2087168/1‑100 (MQ=255)
ccAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCgg > 1:2769423/1‑100 (MQ=255)
ccAGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCgg < 2:1710676/100‑1 (MQ=255)
cAGTGGCGCGTTAGCGGGGTTACCCTCCGGCCCCAGCAGTTGCCCAAACACCCAGACATCGGGAAACCCTGCCCAAAACCGTTTGCGAGAACCTTCCgct > 2:653444/1‑98 (MQ=255)
aGTGGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGgtt > 1:3754564/1‑100 (MQ=255)
|
TTTCTGCCCTTTTGATAACTTCAGGTTAACAATACGCCCGTTGCTTAACTCAAGCTTATGAGCCATTTTCAGCTGCGCCAGCCACTTCTCAACCAGTTGCGGGTTAGCGGGTTTACCCTCCGGCCCCAGCAGTTGATCAAACAGCCAGACATCGGTAAACACTGCCGAAAACAGTTTGCGATAATCTTCCGGTT > NC_000913/2307251‑2307444
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
