Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I52 R1
|
239 |
220.4 |
11079197 |
93.2% |
10325811 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,420,409 |
A→C |
L26W (TTG→TGG) |
yfcF ← |
glutathione S‑transferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,420,409 | 0 | A | C | 98.4%
| 632.5
/ 0.4
| 185 | L26W (TTG→TGG) | yfcF | glutathione S‑transferase |
| Reads supporting (aligned to +/- strand): ref base A (0/3); new base C (92/88); total (94/91) |
| Fisher's exact test for biased strand distribution p-value = 1.21e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01 |
Only 100 of 186 total aligned reads displayed.
CGGCGTGTCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCAACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAAAGG > NC_000913/2420313‑2420505
|
cGGCGTGTCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACg < 1:755087/100‑1 (MQ=255)
gCGTGTCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGcc > 1:337018/1‑100 (MQ=255)
gtgtCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTgccacgccac > 2:3884145/1‑100 (MQ=255)
gtgtCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCATGCCAc > 2:3722511/1‑100 (MQ=255)
tgtCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCAcc < 2:2982872/100‑1 (MQ=255)
gtCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCAccc > 2:3768131/1‑100 (MQ=255)
tCTGACCGTAACCTTGCCCCGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCa > 2:4002680/1‑100 (MQ=255)
tCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCa > 2:3129063/1‑100 (MQ=255)
tCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCa > 2:2277642/1‑100 (MQ=255)
gACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGc > 2:4440763/1‑100 (MQ=255)
gACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGc < 2:5274660/100‑1 (MQ=255)
aCCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCg > 2:1713998/1‑100 (MQ=255)
ccGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCgg > 1:4276287/1‑100 (MQ=255)
ccGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCgg > 1:5018204/1‑100 (MQ=255)
cGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGa > 2:209164/1‑100 (MQ=255)
gTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGAt < 1:2868318/100‑1 (MQ=255)
tAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATa < 1:2914362/100‑1 (MQ=255)
tAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATa > 1:1053028/1‑100 (MQ=255)
aaCCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATaa > 1:4707895/1‑100 (MQ=255)
aCCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTATTCCTGCCACGCCACCCAGGCGGATAac < 1:4916443/100‑1 (MQ=255)
aCCTTGCCACGTCGGCTGCAAATGTTCACCGCAGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAac < 2:843200/100‑1 (MQ=255)
ccTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAaca > 1:3211858/1‑100 (MQ=255)
ccTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAaca > 2:1165432/1‑100 (MQ=255)
ccTTGCCACGTCCGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAaca < 1:4584657/100‑1 (MQ=255)
cTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTTATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAacac < 2:4948130/100‑1 (MQ=255)
gCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATa < 2:3808530/100‑1 (MQ=255)
gCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATa > 2:3784807/1‑100 (MQ=255)
ccACGTCGGCTGGAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATaa > 1:4786117/1‑100 (MQ=255)
cACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACTCATAAg > 1:2900229/1‑100 (MQ=255)
cACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAg < 2:1871802/100‑1 (MQ=255)
cGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAggg < 1:140466/100‑1 (MQ=255)
cGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAggg < 2:505789/100‑1 (MQ=255)
gTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAgggg > 1:2013606/1‑100 (MQ=255)
gTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAgggg < 1:12338/100‑1 (MQ=255)
gTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAgggg < 1:5356182/100‑1 (MQ=255)
gTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAgggg < 2:2788621/100‑1 (MQ=255)
ctgCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGgag < 1:5089901/98‑1 (MQ=255)
ggCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGgaga > 2:3685394/1‑100 (MQ=255)
gCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGaa > 1:1674198/1‑100 (MQ=255)
tGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGTCGGATAACACATAAGGGGAGaaaa > 2:4136624/1‑100 (MQ=255)
tGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGaaaa < 1:3819837/100‑1 (MQ=255)
aaaTGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGt < 1:3047687/100‑1 (MQ=255)
aTGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTgg < 1:1005641/100‑1 (MQ=255)
aTGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTgg < 1:211198/100‑1 (MQ=255)
tGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTggg < 1:3398247/100‑1 (MQ=255)
tGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTggg > 1:4470611/1‑100 (MQ=255)
gataaCCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAAAAAAAAAAAAAAAAAAAAGTGGGc < 2:2239975/96‑1 (MQ=255)
gTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGc > 1:944140/1‑100 (MQ=255)
ttCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCa < 2:416646/100‑1 (MQ=255)
ctccGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATc < 1:832921/98‑1 (MQ=255)
cACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATc > 2:3945227/1‑100 (MQ=255)
cACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATc < 1:612983/100‑1 (MQ=255)
cACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATc > 1:3388778/1‑100 (MQ=255)
cACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGAATc > 2:696339/1‑100 (MQ=255)
ccGCTGTCGAGGTCGATGGTCTTGGTATGAAACGACAGGCCTTTTTCCTGCCACACCACCCAGGCGGATAACAAATAAGTGGAGAAAAAGTGGGCATCTg > 1:5205022/1‑100 (MQ=255)
ccGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCAACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTg < 1:1001071/100‑1 (MQ=255)
gCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGAc > 1:2998889/1‑100 (MQ=255)
cTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGAcc < 1:3803030/100‑1 (MQ=255)
tGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCa < 2:5385473/100‑1 (MQ=255)
gTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCaa > 1:688531/1‑100 (MQ=255)
cGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAg > 1:4534971/1‑100 (MQ=255)
cGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAg > 1:1933494/1‑100 (MQ=255)
ggTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCATCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGt < 1:2728364/100‑1 (MQ=255)
ggTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGt < 2:4948419/100‑1 (MQ=255)
ggTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGt > 1:4034816/1‑100 (MQ=255)
cGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGAt > 1:3800012/1‑100 (MQ=255)
cGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGAt < 1:2677486/100‑1 (MQ=255)
gATGGTCTTGATATGAAACGACAGGCCTTTTTTTTTTTTTTTTACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATa > 2:258527/1‑100 (MQ=255)
gATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATa < 1:345256/100‑1 (MQ=255)
aTGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACAAAAAAAAAAAAAAAAAGTGGGCATCTGACCAAAGCGTGATAg < 2:111733/100‑1 (MQ=255)
ggccTTGATATGAAACGACAGGCTTTTTTTCTGCCACGCAACCCAGGCCGAGAACACATAAGGGCAGAAAAAGTGGGCCTCTGTCTAAAGCGGGATcgcg > 2:1239577/4‑100 (MQ=255)
ggTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCg > 2:432507/1‑100 (MQ=255)
ggTCTTGATATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCg < 1:3648851/100‑1 (MQ=255)
ggTCTTGAGATGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCg < 1:2235302/100‑1 (MQ=255)
ggTCGTGATAGGAAACGACAGGCCTATTTTGTGACACGGTACCCAGGCGGATAACAGAAAAAAAAAAAAAAAGTGGGCATCTGACCAAAGCGTGATAGCg < 2:4425844/100‑1 (MQ=255)
tatGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACt > 2:3483953/1‑100 (MQ=255)
atGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTc < 2:1039088/100‑1 (MQ=255)
atGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTc < 2:1372481/100‑1 (MQ=255)
tGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCa < 1:3924475/100‑1 (MQ=255)
tGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCa > 1:5546614/1‑100 (MQ=255)
tGAAACGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCa > 1:4218402/1‑100 (MQ=255)
gAAACGACAGGCCTTTTTCCTGCCACGCCA‑CCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCAtt < 2:2745824/100‑1 (MQ=255)
aaaCGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCAtt < 2:2838393/100‑1 (MQ=255)
aaaCGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAAAGAAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCAtt < 2:293746/100‑1 (MQ=255)
aaCGACAGGCCTTTTTCCTGCCACGCCACCCAGGCGTATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTa < 1:5249733/100‑1 (MQ=255)
aaCGACAGGCCTTTTTCCTGCCACACCAACCAAGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTa < 2:2133894/100‑1 (MQ=255)
aaCGACACGCCGTGTTCCTGCCACGCCAGCCAAGCGGAGAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTa < 2:4887090/100‑1 (MQ=255)
cAGGCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTcc > 1:5153645/1‑100 (MQ=255)
ggCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTc > 1:4737217/1‑100 (MQ=255)
gCCTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCg > 2:3367366/1‑100 (MQ=255)
cTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGc < 1:3259507/100‑1 (MQ=255)
cTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGc > 2:2913963/1‑100 (MQ=255)
cTTTTTCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGc > 1:4094621/1‑100 (MQ=255)
ttCCTGCCACGCCACCCAGTCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATa < 1:4174279/100‑1 (MQ=255)
ttCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATa < 1:4511788/100‑1 (MQ=255)
tCCTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATaa > 2:5361641/1‑100 (MQ=255)
ccTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATaaa > 2:3965616/1‑100 (MQ=255)
cTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAAAg < 2:4481378/100‑1 (MQ=255)
cTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAAAg > 1:1973473/1‑100 (MQ=255)
cTGCCACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAAAg > 2:1473903/1‑100 (MQ=255)
|
CGGCGTGTCTGACCGTAACCTTGCCACGTCGGCTGCAAATGTTCACCGCTGTCGAGGTCGATGGTCTTGATATGAAACGACAGGCCTTTTTCCTGCAACGCCACCCAGGCGGATAACACATAAGGGGAGAAAAAGTGGGCATCTGACCAAAGCGTGATAGCGGGTTTACTCATTATGTCCTCGGCAATAAAGG > NC_000913/2420313‑2420505
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
