Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| JC JC |
NC_000913 |
111,051 |
IS1 (–) +9 bp |
coding (8‑16/390 nt) |
mutT → |
dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase |
|
| |
seq id |
position |
reads (cov) |
reads (cov) |
score |
skew |
freq |
annotation |
gene |
product |
| * |
? |
NC_000913 |
19796 = | NA (NA) | 157 (1.000) |
98/198 |
0.2 |
100% |
noncoding (768/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
= 111059 |
0 (0.000) | coding (16/390 nt) |
mutT |
dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase |
| * |
? |
NC_000913 |
= 20563 | NA (NA) | 161 (1.030) |
93/198 |
0.4 |
100% |
noncoding (1/768 nt) |
IS1 |
repeat region |
| ? | NC_000913 |
111051 = |
0 (0.000) | coding (8/390 nt) |
mutT |
dGTP‑preferring nucleoside triphosphate pyrophosphohydrolase |
Only 100 of 157 total aligned reads displayed.
GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/19892‑19796
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATGGCACTG < NC_000913/111059‑110961
GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTT > 1:3360812/1‑100
GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTT > 1:2281821/1‑100
AAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTG < 1:3556314/100‑1
AAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTG < 2:969866/100‑1
AGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGC > 2:3197568/1‑100
AGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGC > 2:3202921/1‑100
GTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCA < 1:2847577/100‑1
CGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGC > 1:909418/1‑100
CGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGC > 1:2864824/1‑100
TGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTT > 1:1698899/1‑100
GTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTT > 1:2586746/1‑100
TCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTT < 2:1323377/100‑1
TCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTT < 2:3967835/100‑1
GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGACCATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCA > 2:1072897/1‑100
GTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCA < 2:527618/100‑1
CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTG > 1:3428781/1‑100
CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTG > 1:3308603/1‑100
CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTG < 2:1864667/100‑1
CTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTG < 1:1878253/100‑1
TCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGT > 2:1706974/1‑100
CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTGTCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTC > 2:3075302/1‑100
CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTC > 1:705625/1‑100
AAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCT < 1:2257733/100‑1
AAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTT < 2:2333881/100‑1
aagCGGTGTAGCTGCATGACAAAGTCATCGAGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTA < 2:3427369/97‑1
AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTA < 2:2991313/100‑1
TCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAA < 1:2158305/100‑1
CGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAAC < 1:36679/100‑1
CGGGGGAGCTGCATGACAAAGTCATCGGGCATTAGCTGAGCATAAAACACTATCAATAAGTCGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAAC < 2:345230/100‑1
GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCT > 1:3193551/1‑100
TGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTA > 2:2211044/1‑100
GGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTAT > 1:3899839/1‑100
GAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACATTTGCAGCTTTTTCATTGTCTTAAACCTATA > 2:179609/1‑100
AGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAA < 1:2976408/100‑1
GCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAA < 2:2788366/100‑1
CATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAG < 1:1740370/100‑1
CATGACAAAGTCAGCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAG < 1:1347895/100‑1
TGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTGGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGC < 1:3067079/100‑1
GACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCG < 2:2063561/100‑1
ACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGC > 2:254688/1‑100
CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCC > 2:2489869/1‑100
CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCC > 2:2125985/1‑100
CATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCC < 1:2576464/100‑1
ATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCT > 1:98135/1‑100
TCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTG < 1:3957177/100‑1
CGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCGTTTTCATTTTCTTAAACCTATAGAAAAGGCGCATAATCCTGC > 2:2612532/1‑100
GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCG > 1:2922447/1‑100
GGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCG > 2:2566930/1‑100
GGCATTATCTGAACATAAAACACTATCAATAAGTAGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGC > 2:1855043/1‑100
GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCn < 1:1228132/100‑2
GCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCC < 2:663458/100‑1
ATTATCTTAACATAAAACACTATCAAGAAGTTGGAGTCATTATCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTT < 2:3171624/100‑1
ATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTCCAGCTTTTTCATTGTCTTAAACCTATAAAACAGGCGCAGAATCCTGCGCCTT > 2:1926495/1‑100
TTATCTGAGCATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTT < 2:1448513/100‑1
TTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTT > 2:57005/1‑100
ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTA > 2:33413/1‑100
ATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTA > 2:2251574/1‑100
TCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTAC < 1:1550731/100‑1
CTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACT < 2:438114/100‑1
TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTT > 2:3607045/1‑100
TGAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTT > 1:1945118/1‑100
GAACATAAAACGCTATCAATAAGTTGGAGGCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGGATTCTGCGCCTTTTttata < 2:3398533/100‑6
GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGGATTCTGCGCCTTTTttata < 2:2651948/100‑6
GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGGATTCTGCGCCTTTTttata < 2:2653336/100‑6
GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGGATTCTGCGCCTTTTttata < 1:1013772/100‑6
GAACATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGGATTCTGCGCCTTTTttata < 1:3951591/100‑6
CATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAAC < 1:118221/100‑1
ATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACA < 1:1643520/100‑1
ATAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACA < 1:3997106/100‑1
TAAAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAG > 1:200631/1‑100
AAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTT > 1:3054016/1‑100
AAACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTGTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTT > 2:3079213/1‑100
AAACACTATCAATAAGCTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAACACAGGCGCAGAATCCTCCGTCTTGTACTTCAACAact > 2:2332119/1‑97
AACACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTA > 1:2547840/1‑100
CACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGC < 2:1944344/100‑1
ACTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCT > 1:1305225/1‑100
CTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAGACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTGCAACACTTAGCTT > 1:3493072/1‑100
CTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTT < 2:1583414/100‑1
CTATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTT > 2:3580753/1‑100
TATCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTT < 2:1670861/100‑1
TCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTA > 2:2446516/1‑100
TCAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACGTCAACAGTTGGCTTTTA > 1:101514/1‑100
CAATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTAT < 2:1436983/100‑1
AATAAGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATT > 2:149039/1‑100
AGTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAG > 1:390073/1‑100
GTTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGG > 1:3950061/1‑100
TTGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGC > 1:2700396/1‑100
TGGAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCG > 2:1545423/1‑100
GAGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGC > 2:1244251/1‑100
AGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCC < 2:2547203/100‑1
AGTCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCC < 1:2517446/100‑1
TCATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCAT < 1:1720923/100‑1
CATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATG > 1:941454/1‑100
CATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATG > 2:2448190/1‑100
CATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATG < 2:2954878/100‑1
ATTACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATGG > 2:714932/1‑100
ACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATGGCAC < 2:3650638/100‑1
ACCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATGGCAC > 1:1892936/1‑100
CCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATGGCACT > 2:2265145/1‑100
CCTTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATGGCACT < 1:3521234/100‑1
GAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/19892‑19796
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTTGCAGCTTTTTCATTGTCTTAAACCTATAAAAAAGGCGCAGAATCCTGCGCCTTTTACTTCAACAGTTAGCTTTTATTGCAGGCGGCCATGGCACTG < NC_000913/111059‑110961
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
|---|
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |
GATK/CNVnator alignment
N/A
