Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F422 I53 R1
|
229 |
158.0 |
8090706 |
91.1% |
7370633 |
100.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,024,185 |
A→C |
N73T (AAT→ACT) |
rcsA → |
transcriptional regulator of colanic acid capsular biosynthesis |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,024,185 | 0 | A | C | 92.6%
| 453.1
/ 20.7
| 150 | N73T (AAT→ACT) | rcsA | transcriptional regulator of colanic acid capsular biosynthesis |
| Reads supporting (aligned to +/- strand): ref base A (6/5); new base C (70/67); total (78/72) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.28e-01 |
Only 100 of 151 total aligned reads displayed.
ATAGCTTGTGATTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAGTTCTAA > NC_000913/2024088‑2024284
|
aTAGCTTGTGATTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTc < 2:1761394/100‑1 (MQ=255)
tAGCTTGTGATTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCa < 1:2131829/100‑1 (MQ=255)
aGCTTGTGATTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCaa < 2:3534519/100‑1 (MQ=255)
ttGTGATTCACAGCGCCCTTCAGTGGTGTTTATTAATGGGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACAt < 2:333530/100‑1 (MQ=255)
tgtgATTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATc > 2:2263279/1‑100 (MQ=255)
tgATTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATccc < 2:1293623/100‑1 (MQ=255)
aTTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATTCCaa > 1:3657882/1‑100 (MQ=255)
aTTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCaa > 1:3317760/1‑100 (MQ=255)
ttCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAAt < 1:2558071/100‑1 (MQ=255)
ttCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAAt > 2:2518560/1‑100 (MQ=255)
ttCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAAt < 2:3172370/100‑1 (MQ=255)
gtCACAGCGCCCTGCAGTGGGGTTTATGAATGAGGACTGTTTCATCCACGATGCTTCAAACATGCAGCTTATCAAGCTCATCAGTACTCAACATCCCAAt > 2:3996203/2‑100 (MQ=255)
tCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATa > 2:3855327/1‑100 (MQ=255)
caGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGt > 1:789121/1‑100 (MQ=255)
cgcCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGttat < 2:1096028/100‑1 (MQ=255)
gcCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGttatt < 2:2348036/100‑1 (MQ=255)
tCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATcn < 1:1363081/100‑2 (MQ=255)
tCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCg < 2:559733/100‑1 (MQ=255)
cAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGt < 1:1442804/100‑1 (MQ=255)
cAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGt < 2:1212007/100‑1 (MQ=255)
gtgtTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTa < 1:2776989/100‑1 (MQ=255)
tgtTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTAt > 2:1468341/1‑100 (MQ=255)
gtTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATg > 1:3985343/1‑100 (MQ=255)
gtTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATg > 1:404804/1‑100 (MQ=255)
gtTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATg > 2:46771/1‑100 (MQ=255)
gtTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATg > 1:959871/1‑100 (MQ=255)
tattaATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCa > 2:3798104/1‑100 (MQ=255)
ttaATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAAt > 1:935840/1‑100 (MQ=255)
taATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAAtt > 1:147754/1‑100 (MQ=255)
aTGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGc > 2:2393136/1‑100 (MQ=255)
gAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTTTGGCAATTGCCa < 1:3516542/100‑1 (MQ=255)
aGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCaa < 1:3854700/100‑1 (MQ=255)
ggACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAAt > 1:1188356/1‑100 (MQ=255)
gACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATg > 1:98600/1‑100 (MQ=255)
cTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGtt > 2:3149530/1‑100 (MQ=255)
tGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTc < 2:1557519/100‑1 (MQ=255)
gTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTcn < 1:3239442/100‑2 (MQ=255)
gTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCa > 1:1373142/1‑100 (MQ=255)
gTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCa > 1:2506854/1‑100 (MQ=255)
ttCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCAtt < 1:1087127/100‑1 (MQ=255)
cATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCAtttt > 1:2557650/1‑100 (MQ=255)
aTCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTtg > 1:368039/1‑100 (MQ=255)
ccACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCATTTGCCAATGTTGATTTtgat > 1:1840363/1‑100 (MQ=255)
ccACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTtgat > 1:805068/1‑100 (MQ=255)
ccACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTtgat < 2:2995052/100‑1 (MQ=255)
cACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTtgatg < 1:1270720/100‑1 (MQ=255)
cGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGaa < 2:2105021/100‑1 (MQ=255)
gATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAat < 1:3497598/100‑1 (MQ=255)
cTTCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCt > 2:3950907/1‑100 (MQ=255)
tCTAACAGTCAGCGTATCTAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTAt < 1:3154761/100‑1 (MQ=255)
tCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTAt > 2:2893858/1‑100 (MQ=255)
tCTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTAt < 2:2415959/100‑1 (MQ=255)
tCTAACAGTCAGCGTATCAAGCTCATCATTACCCAACATCCCAATACGTTATATATCGCTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTAt > 2:889495/1‑100 (MQ=255)
tCTAACAGTCAGCGTATCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGACTATCtcc > 1:629410/1‑98 (MQ=255)
tCTAACAGTCAGCGTATCAAACTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTAt > 1:566401/1‑100 (MQ=255)
cTAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATATAtt > 2:3606731/1‑100 (MQ=255)
cTAACAGTCAGCGTATCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTAtt < 1:1914048/100‑1 (MQ=255)
tAACAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTg < 1:1012447/100‑1 (MQ=255)
aaCAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTgg < 2:1301976/100‑1 (MQ=255)
aaCAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTgg < 1:1301368/100‑1 (MQ=255)
cAGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTc < 1:2675426/100‑1 (MQ=255)
aGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCa > 2:1598834/1‑100 (MQ=255)
aGTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCa < 2:3035580/100‑1 (MQ=255)
gTCAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAg < 2:1978702/100‑1 (MQ=255)
ctgtttATCAAGCTCATCAGTACTCATAATCCCAACACGTTATTTATCGTTTTGATGGCGATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGaa < 2:514527/95‑1 (MQ=255)
cAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGGCAATGTTCATTTTGATGAATATTTATTGGTTAGaa > 2:3368830/1‑100 (MQ=255)
cAGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGaa < 1:1144555/100‑1 (MQ=255)
aGCGTATCAAGCTCATCATTACTCAACATCCCAATAGGTTGTTTATCGTTTTTACGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGaaa > 2:3754425/1‑100 (MQ=255)
aGCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGaaa > 2:3545507/1‑100 (MQ=255)
gCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGaaaa > 1:1144162/1‑100 (MQ=255)
gCGTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGaaaa > 2:2798015/1‑100 (MQ=255)
gTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGaaaaaa > 1:1623411/1‑100 (MQ=255)
gTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGaaaaaa < 1:3781336/100‑1 (MQ=255)
gTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCAAATGTTCATTTTGATGAATATCTATTGGTCAGaaaaaa < 2:1091584/100‑1 (MQ=255)
gTATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTACGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGaaaaaa > 1:4050669/1‑100 (MQ=255)
tATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAAt < 1:2430440/100‑1 (MQ=255)
tATCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAAt < 1:3784779/100‑1 (MQ=255)
aTCAAGCTCATCATTATTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAAtt > 2:3865831/1‑100 (MQ=255)
aTCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAAtt > 2:2575566/1‑100 (MQ=255)
aTCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAAtt > 2:3050893/1‑100 (MQ=255)
tCAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAAttt < 2:1163430/100‑1 (MQ=255)
cAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTa < 1:1704573/100‑1 (MQ=255)
cAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTa < 1:2011770/100‑1 (MQ=255)
cAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTa < 1:2727646/100‑1 (MQ=255)
cAAGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTa > 1:1683292/1‑100 (MQ=255)
aaGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTTCCAATGTTCATTTTGATGAATATCTATTGGTGAGAAAAGATTTAt > 2:810271/1‑100 (MQ=255)
aaGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTAt > 2:1636619/1‑100 (MQ=255)
aGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTAtt > 2:266231/1‑100 (MQ=255)
aGCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTAtt < 1:2249483/100‑1 (MQ=255)
gCTCATCATTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTg < 2:2953128/100‑1 (MQ=255)
catcatTACTTAACATCCCAATACGTTAATTGACGTTGTACCGGCAATTCCCATAGTGCATTTTGTTGCCTCTCTATCGATCAGTTACAATTTATTGATc > 2:785563/1‑100 (MQ=255)
catcatTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATc > 1:2740468/1‑100 (MQ=255)
catcatTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATc < 1:3478277/100‑1 (MQ=255)
catcatTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATc > 2:686749/1‑100 (MQ=255)
tcatTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAg < 1:1295585/100‑1 (MQ=255)
tcatTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAg < 2:165425/100‑1 (MQ=255)
tcatTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAg < 2:641467/100‑1 (MQ=255)
catTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAGt > 1:164300/1‑100 (MQ=255)
atTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAGtt < 1:2005808/100‑1 (MQ=255)
atTACTCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAGtt > 2:2208291/1‑100 (MQ=255)
|
ATAGCTTGTGATTCACAGCGCCCTTCAGTGGTGTTTATTAATGAGGACTGTTTCATCCACGATGCTTCTAACAGTCAGCGTATCAAGCTCATCATTAATCAACATCCCAATACGTTATTTATCGTTTTTATGGCAATTGCCAATGTTCATTTTGATGAATATCTATTGGTCAGAAAAAATTTATTGATCAGTTCTAA > NC_000913/2024088‑2024284
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
